vOTU vOTU-050441

vOTU: vOTU-050441

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-050441
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-03816 → vGENUS-17736 → vSUBGEN-33166 → vOTU-050441
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0312769
Biosample ID	SAMN06115446
Genome length (bp)	33,377 bps
CheckV completeness	100.00% (Complete)
CDS count	47
CDS density	91.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	13	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → NSJ-51 → NSJ-51 sp900549795	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0312769_1	K08309	45.0	0.0000000000019	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0312769_1	phrog_19890	84.3	1.3e-24	N/A	unknown function
UniRef90	UHGV-0312769_1	UniRef90_A0A8J6J9H8	391.0	0	Lytic transglycosylase domain-containing protein	N/A
eggNOG-mapper	UHGV-0312769_1	665950.HMPREF1025_01371	69.7	0.0000000000105	Transglycosylase SLT domain	N/A
Pfam	UHGV-0312769_1	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0312769_1	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0312769_1	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_2	phrog_1123	51.4	0.000000000000018	N/A	unknown function
Pfam	UHGV-0312769_2	PF03965	N/A	N/A	Penicillinase repressor	Penicillinase_R
structural_annotation	UHGV-0312769_2	PF04703,MF_01804,TIGR00373,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_4	phrog_659	201.4	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_4	UniRef90_UPI001E5A6693	303.0	0	N/A	N/A
eggNOG-mapper	UHGV-0312769_4	1507.HMPREF0262_00431	216.0	0	N/A	N/A
Pfam	UHGV-0312769_4	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0312769_4	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_5	phrog_72	50.2	0.000000000000038	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_5	UniRef90_UPI001F3F3E5C	176.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0312769_5	445972.ANACOL_01825	130.0	7.54e-36	N/A	N/A
structural_annotation	UHGV-0312769_5	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_6	phrog_7370	69.3	4.6e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_6	UniRef90_UPI00082FB90B	141.0	1.29004e-41	HNH endonuclease	N/A
Pfam	UHGV-0312769_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0312769_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0312769_7	K03111	151.1	9.80909e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0312769_7	phrog_44	151.5	4.2039e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_7	UniRef90_A0A8J6JEC0	269.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0312769_7	411467.BACCAP_02389	228.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0312769_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0312769_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0312769_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0312769_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0312769_7	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_8	phrog_270	106.6	3.1e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_8	UniRef90_UPI000F093508	108.0	1.08e-24	phage replication protein	N/A
eggNOG-mapper	UHGV-0312769_8	411490.ANACAC_00800	125.0	4.29e-32	N/A	N/A
structural_annotation	UHGV-0312769_8	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_9	phrog_9804	152.3	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0312769_9	UniRef90_UPI0018976F94	268.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0312769_9	1121344.JHZO01000003_gene981	182.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0312769_9	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0312769_9	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_10	phrog_190	121.6	5.9e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_10	UniRef90_A0A6A8VJ62	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0312769_10	1226322.HMPREF1545_00295	115.0	5.82e-31	N/A	N/A
Pfam	UHGV-0312769_10	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0312769_10	PF06356	N/A	N/A	N/A	N/A
Pfam	UHGV-0312769_11	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
Pfam	UHGV-0312769_12	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0312769_12	PF04936,NF033558	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_15	phrog_874	174.0	0	N/A	unknown function
UniRef90	UHGV-0312769_15	UniRef90_A0A4P6LRJ9	183.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0312769_15	411468.CLOSCI_00298	161.0	0	N/A	N/A
structural_annotation	UHGV-0312769_15	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
UniRef90	UHGV-0312769_17	UniRef90_A0A8J6MBK5	127.0	1.38e-36	N/A	N/A
Pfam	UHGV-0312769_17	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0312769_20	PF19070	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_21	phrog_248	42.4	0.000000000012	transcriptional activator	transcription regulation
eggNOG-mapper	UHGV-0312769_21	1007096.BAGW01000031_gene129	63.5	0.0000000000406	N/A	N/A
structural_annotation	UHGV-0312769_21	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_22	phrog_309	181.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0312769_22	UniRef90_A0A8J6MBH6	303.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0312769_22	1408437.JNJN01000045_gene597	195.0	0	HNH endonuclease	N/A
Pfam	UHGV-0312769_22	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-0312769_22	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0312769_22	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0312769_23	K06909	126.0	4e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0312769_23	phrog_2	148.2	8.82818e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0312769_23	UniRef90_A0A8J6MB41	882.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0312769_23	641112.ACOK01000073_gene2888	408.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0312769_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0312769_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0312769_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0312769_23	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_25	phrog_156	120.8	3.3e-36	portal protein	head and packaging
eggNOG-mapper	UHGV-0312769_25	693746.OBV_01670	551.0	0	N/A	N/A
structural_annotation	UHGV-0312769_25	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0312769_26	755731.Clo1100_2435	83.6	9.76e-16	N/A	N/A
PHROG	UHGV-0312769_27	phrog_422	146.3	1.90577e-43	major head protein	head and packaging
UniRef90	UHGV-0312769_27	UniRef90_A0A8J6JH37	663.0	0	Chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0312769_27	693746.OBV_01700	239.0	0	N/A	N/A
Pfam	UHGV-0312769_27	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0312769_27	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0312769_29	1519439.JPJG01000011_gene57	134.0	1.73e-38	N/A	N/A
structural_annotation	UHGV-0312769_29	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0312769_30	UniRef90_A0A4D7ASB8	641.0	0	N/A	N/A
eggNOG-mapper	UHGV-0312769_30	693746.OBV_01680	628.0	0	N/A	N/A
structural_annotation	UHGV-0312769_30	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_31	phrog_23208	43.7	0.0000000000013	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0312769_34	742738.HMPREF9460_03967	107.0	1.47e-28	N/A	N/A
PHROG	UHGV-0312769_35	phrog_21357	110.2	1.7e-32	endolysin	lysis
UniRef90	UHGV-0312769_35	UniRef90_A0A8J6MFK6	406.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0312769_35	1378168.N510_02471	192.0	0	NLP P60 protein	N/A
Pfam	UHGV-0312769_35	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0312769_35	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0312769_35	TIGR02594	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_36	phrog_355	59.2	7.4e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0312769_36	UniRef90_A0A8J6M6I8	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0312769_36	1256908.HMPREF0373_00479	122.0	4.58e-35	N/A	N/A
Pfam	UHGV-0312769_36	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0312769_36	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0312769_37	phrog_199	89.7	3.1e-26	holin	lysis
UniRef90	UHGV-0312769_37	UniRef90_A0A8J6JEU7	266.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0312769_37	411467.BACCAP_00280	162.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0312769_37	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0312769_37	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0312769_37	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0312769_37	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0312769_38	693746.OBV_01600	129.0	3.24e-29	N/A	N/A
UniRef90	UHGV-0312769_39	UniRef90_U2AS96	742.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0312769_39	693746.OBV_01590	576.0	0	N/A	N/A
KOfam	UHGV-0312769_40	K14059	185.7	0	int; integrase	N/A
PHROG	UHGV-0312769_40	phrog_1	159.2	0	integrase	integration and excision
UniRef90	UHGV-0312769_40	UniRef90_A0A8J6JEJ8	714.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0312769_40	742738.HMPREF9460_01344	225.0	0	Phage integrase family	N/A
Pfam	UHGV-0312769_40	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0312769_40	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0312769_40	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
COG	UHGV-0312769_47	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0312769	Yes	33,377	60	100	1