vOTU vOTU-050950

vOTU: vOTU-050950

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-050950
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00124 → vSUBFAM-02126 → vGENUS-03895 → vSUBGEN-36140 → vOTU-050950
Host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → Copromorpha → Copromorpha sp900549125
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0350764
Biosample ID	N/A
Genome length (bp)	41,977 bps
CheckV completeness	100.00% (Complete)
CDS count	73
CDS density	92.16%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Peptostreptococcales → Anaerovoracaceae → Copromorpha → Copromorpha sp900549125	Total connections	5	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0350764_1	1121091.AUMP01000032_gene3098	62.0	0.000000000353	P22 coat protein-protein 5 domain protein	N/A
PHROG	UHGV-0350764_4	phrog_156	73.3	1.5e-22	portal protein	head and packaging
eggNOG-mapper	UHGV-0350764_4	1232449.BAHV02000016_gene1822	353.0	0	N/A	N/A
structural_annotation	UHGV-0350764_4	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_6	phrog_38	349.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0350764_6	UniRef90_A0A6N9QEJ3	575.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0350764_6	755731.Clo1100_2438	393.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0350764_6	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0350764_6	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0350764_6	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0350764_6	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0350764_6	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-0350764_8	UniRef90_A0A316PXX3	63.2	0.0000000000174	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-0350764_8	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_9	phrog_7245	204.6	0	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0350764_9	UniRef90_UPI001D06A358	275.0	0	zincin-like metallopeptidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0350764_9	97139.C824_00155	255.0	0	N/A	N/A
Pfam	UHGV-0350764_9	PF08401	N/A	N/A	N-terminal domain of anti-restriction factor ArdC	ArdcN
Pfam	UHGV-0350764_9	PF18818	N/A	N/A	Zincin-like metallopeptidase	MPTase-PolyVal
COG	UHGV-0350764_9	COG4227	N/A	N/A	Antirestriction protein ArdC	N/A
structural_annotation	UHGV-0350764_9	PF18818,PF08401,COG4227	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_14	phrog_36	40.7	0.000000000044	transcriptional regulator	transcription regulation
KOfam	UHGV-0350764_18	K22300	46.6	0.00000000000081	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0350764_18	phrog_8	42.7	0.000000000013	transcriptional regulator	transcription regulation
Pfam	UHGV-0350764_18	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
COG	UHGV-0350764_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0350764_18	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_19	phrog_474	114.8	1.2e-33	phosphofructokinase	other
UniRef90	UHGV-0350764_19	UniRef90_A0A316NLA2	107.0	1.81e-28	N/A	N/A
eggNOG-mapper	UHGV-0350764_19	428125.CLOLEP_01367	90.9	8.23e-23	N/A	N/A
Pfam	UHGV-0350764_19	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0350764_19	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_20	phrog_229	118.6	5.3e-35	MazG-like pyrophosphatase	other
UniRef90	UHGV-0350764_20	UniRef90_R7BGE2	162.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0350764_20	1226325.HMPREF1548_02959	109.0	2.6e-29	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0350764_20	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0350764_20	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0350764_20	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_22	phrog_599	40.6	0.000000000036	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0350764_22	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0350764_22	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
PHROG	UHGV-0350764_30	phrog_478	120.6	6.7e-36	site-specific recombination directionality factor RDF	integration and excision
eggNOG-mapper	UHGV-0350764_30	768486.EHR_00720	131.0	1.01e-37	N/A	N/A
KOfam	UHGV-0350764_31	K03111	139.9	3.00004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0350764_31	phrog_44	136.8	1.50001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0350764_31	UniRef90_A0A316Q453	191.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0350764_31	883109.HMPREF0380_00268	180.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0350764_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0350764_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0350764_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0350764_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0350764_31	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_32	phrog_1374	69.7	3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0350764_32	1203606.HMPREF1526_01891	77.0	1.85e-17	N/A	N/A
structural_annotation	UHGV-0350764_32	TIGR04438	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_33	phrog_757	66.4	3.6e-19	DNA methyltransferase	other
eggNOG-mapper	UHGV-0350764_33	428127.EUBDOL_01513	283.0	0	N/A	N/A
AcrCatalog	UHGV-0350764_33	cluster_47493	161.0	0	NA	N/A
PHROG	UHGV-0350764_35	phrog_419	104.2	1.5e-30	N/A	unknown function
UniRef90	UHGV-0350764_35	UniRef90_A0A0I7PZA1	99.0	3.12e-25	N/A	N/A
eggNOG-mapper	UHGV-0350764_35	33035.JPJF01000093_gene2254	108.0	1.54e-29	N/A	N/A
structural_annotation	UHGV-0350764_35	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_36	phrog_4433	221.8	0	N/A	unknown function
UniRef90	UHGV-0350764_36	UniRef90_UPI0015C58C2D	163.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0350764_36	394503.Ccel_3068	182.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0350764_36	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0350764_37	phrog_244	88.2	1.2e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0350764_37	1280692.AUJL01000025_gene2095	166.0	0	N/A	N/A
Pfam	UHGV-0350764_37	PF01870	N/A	N/A	Archaeal holliday junction resolvase (hjc)	Hjc
structural_annotation	UHGV-0350764_37	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0350764_38	K02314	172.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0350764_38	phrog_19	177.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0350764_38	UniRef90_A0A1C6JYC1	356.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0350764_38	697281.Mahau_0555	116.0	7.21e-26	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0350764_38	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0350764_38	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0350764_38	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_39	phrog_2289	52.2	0.000000000000013	helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0350764_39	UniRef90_A0A229UNW4	58.9	0.00000000302	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0350764_39	742740.HMPREF9474_03118	49.7	0.0000053	Loader and inhibitor of phage G40P	N/A
structural_annotation	UHGV-0350764_39	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_40	phrog_15768	95.6	6.2e-28	N/A	unknown function
UniRef90	UHGV-0350764_40	UniRef90_UPI001C1E0E19	133.0	2e-34	GntR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0350764_40	642492.Clole_1479	110.0	1.38e-26	DnaD domain protein	N/A
COG	UHGV-0350764_40	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0350764_40	PF09681,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_41	phrog_72	64.8	1.5e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0350764_41	UniRef90_UPI000C7BF263	112.0	3.43e-28	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0350764_41	1507.HMPREF0262_00432	111.0	1.43e-28	N/A	N/A
structural_annotation	UHGV-0350764_41	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_42	phrog_7566	94.2	8.3e-28	N/A	unknown function
UniRef90	UHGV-0350764_42	UniRef90_A0A3D5LSW4	128.0	1.15e-36	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0350764_42	1007096.BAGW01000031_gene114	58.9	0.00000000062	N/A	N/A
structural_annotation	UHGV-0350764_43	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_44	phrog_6244	92.5	5e-27	N/A	unknown function
UniRef90	UHGV-0350764_44	UniRef90_A0A7W3XTD8	83.2	1.58e-18	Chromosome segregation ATPase	N/A
eggNOG-mapper	UHGV-0350764_44	562981.HMPREF0428_01006	64.3	0.00000000000627	N/A	N/A
PHROG	UHGV-0350764_45	phrog_14970	210.8	0	N/A	unknown function
UniRef90	UHGV-0350764_45	UniRef90_UPI0018AA3AF0	168.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0350764_45	642492.Clole_0944	164.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0350764_45	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0350764_45	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0350764_45	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0350764_50	UniRef90_UPI0019D34EB4	51.2	0.000000487	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0350764_50	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
KOfam	UHGV-0350764_51	K22300	46.3	0.00000000000089	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0350764_51	phrog_8	46.1	0.0000000000011	transcriptional regulator	transcription regulation
Pfam	UHGV-0350764_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0350764_51	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0350764_54	K06400	294.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0350764_54	phrog_95	303.4	0	integrase	integration and excision
UniRef90	UHGV-0350764_54	UniRef90_UPI001C11D960	320.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0350764_54	525254.HMPREF0072_1329	288.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0350764_54	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0350764_54	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0350764_54	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0350764_54	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0350764_54	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0350764_56	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_57	phrog_16490	52.9	0.0000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-0350764_57	1408437.JNJN01000043_gene803	79.3	0.00000000000000298	N/A	N/A
structural_annotation	UHGV-0350764_58	NF033819	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_59	phrog_36	40.9	0.000000000041	transcriptional regulator	transcription regulation
Pfam	UHGV-0350764_59	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0350764_59	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0350764_59	PF04545,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0350764_60	1408437.JNJN01000060_gene452	178.0	1.21997e-41	heme binding	N/A
COG	UHGV-0350764_60	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
KOfam	UHGV-0350764_63	K08640	85.9	8.3e-25	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0350764_63	phrog_297	84.3	1.9e-24	holin	lysis
UniRef90	UHGV-0350764_63	UniRef90_UPI00165581B2	175.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0350764_63	344022.Q2WC62_BPK1E	79.3	2.82e-16	Peptidase M15	N/A
Pfam	UHGV-0350764_63	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
structural_annotation	UHGV-0350764_63	PF08291,PF01471,COG3108,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_64	phrog_263	73.0	3e-21	holin	lysis
UniRef90	UHGV-0350764_64	UniRef90_UPI0015A56FE5	99.8	1.91e-25	phage holin	N/A
eggNOG-mapper	UHGV-0350764_64	1397699.JNIS01000001_gene2921	57.8	0.000000000714	SPP1 phage holin	N/A
Pfam	UHGV-0350764_64	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
structural_annotation	UHGV-0350764_64	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0350764_65	phrog_2310	43.3	0.0000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0350764_67	411901.BACCAC_01130	67.8	0.00000000188	COG3209 Rhs family protein	N/A
COG	UHGV-0350764_67	COG4926	N/A	N/A	Phage-related protein	N/A
KOfam	UHGV-0350764_68	K06823	58.7	3.9e-17	COL18A; collagen type XVIII alpha	N/A
PHROG	UHGV-0350764_68	phrog_6320	84.3	1.8e-24	tail fiber protein	tail
UniRef90	UHGV-0350764_68	UniRef90_A0A1C5TCF2	121.0	1.42e-32	Collagen triple helix repeat (20 copies)	N/A
eggNOG-mapper	UHGV-0350764_68	1123508.JH636444_gene5347	54.7	0.00000104	N/A	N/A
Pfam	UHGV-0350764_68	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0350764_69	phrog_3287	112.8	2.8e-33	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0350764_69	1232449.BAHV02000016_gene1816	281.0	0	N/A	N/A
structural_annotation	UHGV-0350764_69	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0350764_70	PF20387	N/A	N/A	N/A	N/A
UniRef90	UHGV-0350764_73	UniRef90_UPI000626AA57	57.0	0.00000231	P22 coat protein - protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0350764_73	665956.HMPREF1032_03906	139.0	4.65e-38	P22 coat protein-protein 5 domain protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0350764	Yes	41,977	46	100	1
UHGV-1666612	No	17,036	45	41	1
UHGV-1592974	No	11,555	45	28	1
UHGV-1550280	No	11,306	47	27	1