vOTU vOTU-051067

vOTU: vOTU-051067

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-051067
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1081 → UBA1081 sp900543395
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00513 → vGENUS-00603 → vSUBGEN-15901 → vOTU-051067
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → Flemingibacterium → Flemingibacterium sp900546315
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0360794
Biosample ID	SAMEA4813904
Genome length (bp)	46,340 bps
CheckV completeness	100.00% (Complete)
CDS count	79
CDS density	90.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → Flemingibacterium → Flemingibacterium sp900546315	Total connections	7	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1081 → UBA1081 sp900543395	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0360794_1	phrog_1535	97.3	1.3e-37	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0360794_1	1121866.AUGK01000003_gene1437	184.0	9.80909e-45	phage tail tape measure protein	N/A
COG	UHGV-0360794_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0360794_2	phrog_1194	75.2	7.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0360794_2	1232449.BAHV02000010_gene2724	107.0	2.87e-28	N/A	N/A
structural_annotation	UHGV-0360794_2	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_3	phrog_13879	179.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0360794_3	411902.CLOBOL_00124	286.0	0	N/A	N/A
structural_annotation	UHGV-0360794_3	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360794_4	756499.Desde_2424	62.0	0.000000000839	N/A	N/A
PHROG	UHGV-0360794_5	phrog_2295	77.6	1.3e-22	N/A	unknown function
Pfam	UHGV-0360794_5	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
COG	UHGV-0360794_5	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0360794_5	PF12810,PF20944	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_7	phrog_18593	132.6	2.2e-39	N/A	unknown function
UniRef90	UHGV-0360794_7	UniRef90_A0A2Y9CAD1	169.0	0	Carbohydrate binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0360794_7	411460.RUMTOR_02099	139.0	6.32e-39	N/A	N/A
Pfam	UHGV-0360794_7	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0360794_8	phrog_4105	72.5	5.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0360794_8	397288.C806_00056	86.7	1.08e-20	N/A	N/A
PHROG	UHGV-0360794_9	phrog_15594	92.6	2.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0360794_9	1118055.CAGU01000013_gene763	68.6	0.0000000000000945	N/A	N/A
structural_annotation	UHGV-0360794_9	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_11	phrog_13589	166.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0360794_11	428125.CLOLEP_01434	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0360794_12	742733.HMPREF9469_05009	53.1	0.00000392	N/A	N/A
KOfam	UHGV-0360794_14	K07273	166.6	0	acm; lysozyme	N/A
PHROG	UHGV-0360794_14	phrog_291	144.0	1.19951e-42	endolysin	lysis
UniRef90	UHGV-0360794_14	UniRef90_UPI001AE2307F	137.0	1.11e-34	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0360794_14	999411.HMPREF1092_03301	133.0	3.08e-34	family 25	N/A
Pfam	UHGV-0360794_14	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0360794_14	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0360794_14	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_15	phrog_6918	56.6	3.8e-16	holin	lysis
UniRef90	UHGV-0360794_15	UniRef90_G9YP36	57.0	0.0000000401	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-0360794_15	1236976.JCM16418_1614	50.8	0.00000138	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0360794_15	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0360794_15	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_16	UniRef90_A0A843IZ65	63.2	0.0000000000129	Sigma70_r4 domain-containing protein	N/A
structural_annotation	UHGV-0360794_16	PF04545,MF_00245,NF001074,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0360794_19	PF02255,TIGR00823,COG1447	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0360794_21	PF16734,PF01402	N/A	N/A	N/A	N/A
KOfam	UHGV-0360794_22	K14059	184.0	0	int; integrase	N/A
PHROG	UHGV-0360794_22	phrog_1	167.1	0	integrase	integration and excision
UniRef90	UHGV-0360794_22	UniRef90_A0A328U998	194.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0360794_22	1226322.HMPREF1545_00144	175.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0360794_22	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0360794_22	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0360794_22	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0360794_22	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0360794_23	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0360794_23	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0360794_23	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_25	UniRef90_UPI001C1129A3	105.0	3.59e-24	copper amine oxidase N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0360794_25	1297617.JPJD01000002_gene2729	87.4	3.73e-17	Copper amine oxidase N-terminal domain	N/A
Pfam	UHGV-0360794_25	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
COG	UHGV-0360794_25	COG2340	N/A	N/A	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	N/A
structural_annotation	UHGV-0360794_25	PF07705,COG5633	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_26	phrog_8	40.7	0.000000000047	transcriptional regulator	transcription regulation
UniRef90	UHGV-0360794_26	UniRef90_UPI001AD65ED5	52.0	0.00000389	helix-turn-helix transcriptional regulator	N/A
COG	UHGV-0360794_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0360794_26	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0360794_31	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A
Pfam	UHGV-0360794_36	PF04255	N/A	N/A	N/A	DUF433
Pfam	UHGV-0360794_36	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
dbAPIS	UHGV-0360794_37	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
COG	UHGV-0360794_37	COG5352	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0360794_37	PF01710,NF040595,COG3415	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_39	phrog_474	107.2	2.3e-31	phosphofructokinase	other
UniRef90	UHGV-0360794_39	UniRef90_UPI0019D13FB2	112.0	3.68e-28	N/A	N/A
eggNOG-mapper	UHGV-0360794_39	428125.CLOLEP_01367	101.0	1.43e-25	N/A	N/A
Pfam	UHGV-0360794_39	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0360794_39	PF19905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_42	UniRef90_A0A3A6ECV8	114.0	1.52e-31	N/A	N/A
eggNOG-mapper	UHGV-0360794_42	411470.RUMGNA_00214	71.6	0.00000000000002	N/A	N/A
Pfam	UHGV-0360794_42	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0360794_42	PF04448,NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_46	UniRef90_A0A417H740	112.0	2.52e-29	N/A	N/A
Pfam	UHGV-0360794_46	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0360794_46	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_49	phrog_111	153.3	1.4013e-45	DNA methyltransferase	other
UniRef90	UHGV-0360794_49	UniRef90_A0A0D1YAQ5	189.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0360794_49	411468.CLOSCI_00567	186.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0360794_49	oMTase_00015	189.6	0	orphan methyltransferase	RM
Pfam	UHGV-0360794_49	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0360794_49	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
COG	UHGV-0360794_51	COG1773	N/A	N/A	Flavorubredoxin	N/A
KOfam	UHGV-0360794_54	K10906	86.9	2.9e-29	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0360794_54	phrog_412	233.9	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360794_54	UniRef90_A0A1C6GFL6	243.0	0	Exodeoxyribonuclease 8	N/A
eggNOG-mapper	UHGV-0360794_54	1454004.AW11_02382	191.0	0	N/A	N/A
Pfam	UHGV-0360794_54	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0360794_54	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0360794_54	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_56	phrog_3657	352.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0360794_56	1567013.A0A0A7S0A9_9CAUD	229.0	0	N/A	N/A
KOfam	UHGV-0360794_57	K03111	108.8	8.8e-32	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0360794_57	phrog_44	113.9	1.7e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360794_57	UniRef90_A0A2U1BEJ1	129.0	9.07e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0360794_57	445972.ANACOL_00151	95.1	8.19e-23	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0360794_57	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0360794_57	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0360794_57	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0360794_57	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0360794_57	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_58	phrog_59	145.4	2.00386e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360794_58	UniRef90_E6LJG0	188.0	0	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-0360794_58	887325.HMPREF0381_0095	188.0	0	HNH endonuclease domain protein	N/A
PADLOC	UHGV-0360794_58	HEase_00016	70.3	4e-20	homing endonuclease	RM
Pfam	UHGV-0360794_58	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0360794_58	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0360794_58	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_59	phrog_3490	119.8	1.9e-35	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360794_59	UniRef90_A0A1C6FNL5	157.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0360794_59	357809.Cphy_2986	149.0	4.62428e-44	N/A	N/A
Pfam	UHGV-0360794_59	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0360794_59	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0360794_60	K02316	77.6	1.9e-22	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0360794_60	phrog_11992	85.9	6.2e-25	N/A	unknown function
UniRef90	UHGV-0360794_60	UniRef90_A0A845N2C1	90.5	4.65e-19	DNA primase	N/A
eggNOG-mapper	UHGV-0360794_60	718252.FP2_18240	88.2	5.92e-19	CHC2 zinc finger	N/A
PADLOC	UHGV-0360794_60	drt-cluster192	60.8	3.2e-17	DRT	DRT
Pfam	UHGV-0360794_60	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0360794_60	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0360794_60	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_61	phrog_8841	455.3	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360794_61	UniRef90_A0A1C6FPW9	445.0	0	Superfamily II helicase and inactivated derivatives	N/A
eggNOG-mapper	UHGV-0360794_61	742738.HMPREF9460_02495	380.0	0	N/A	N/A
Pfam	UHGV-0360794_61	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0360794_61	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0360794_61	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0360794_61	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_62	UniRef90_UPI001D07B715	96.3	7.56e-21	DNA-packaging protein	N/A
structural_annotation	UHGV-0360794_62	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0360794_67	K21528	142.9	1.3004e-42	gin; serine recombinase [EC:3.1.22.- 6.5.1.-]	N/A
PHROG	UHGV-0360794_67	phrog_125	188.3	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0360794_67	UniRef90_R7EUM7	258.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-0360794_67	1123288.SOV_1c03900	234.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0360794_67	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0360794_67	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0360794_67	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_68	phrog_38	180.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0360794_68	UniRef90_UPI000419A6BC	372.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0360794_68	1232453.BAIF02000058_gene1623	383.0	0	TIGRFAM Phage	N/A
COG	UHGV-0360794_68	COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_69	phrog_64	169.0	0	portal protein	head and packaging
UniRef90	UHGV-0360794_69	UniRef90_A0A7X9GQD9	389.0	0	Phage portal protein (Fragment)	N/A
eggNOG-mapper	UHGV-0360794_69	1121866.AUGK01000003_gene1429	359.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0360794_69	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0360794_69	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_70	UniRef90_A0A7C7EK05	62.4	0.0000000138	N/A	N/A
structural_annotation	UHGV-0360794_70	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_71	phrog_247	242.3	0	major head protein	head and packaging
UniRef90	UHGV-0360794_71	UniRef90_UPI000A1C9CC1	438.0	0	coat protein	N/A
eggNOG-mapper	UHGV-0360794_71	903814.ELI_3208	431.0	0	N/A	N/A
Pfam	UHGV-0360794_71	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-0360794_71	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0360794_72	UniRef90_A0A1V5X694	97.8	2.79e-24	Phage gp6-like head-tail connector protein	N/A
structural_annotation	UHGV-0360794_72	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0360794_73	1298920.KI911353_gene2656	73.2	0.00000000000000657	N/A	N/A
eggNOG-mapper	UHGV-0360794_74	476272.RUMHYD_01963	59.7	0.00000000883	N/A	N/A
structural_annotation	UHGV-0360794_75	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0360794_76	phrog_158	51.0	0.000000000000026	major tail protein	tail
eggNOG-mapper	UHGV-0360794_76	469596.HMPREF9488_01310	111.0	3.51e-29	N/A	N/A
structural_annotation	UHGV-0360794_76	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0360794	Yes	46,340	56	100	1
UHGV-0086903	No	46,360	56	100	1
UHGV-1476411	No	46,360	56	100	1
UHGV-2143122	No	46,171	56	100	1
UHGV-1409118	No	27,280	55	59	1
UHGV-1688660	No	17,321	57	38	1