vOTU vOTU-051367

vOTU: vOTU-051367

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-051367
Number of genomes	31
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01500 → vGENUS-02072 → vSUBGEN-29367 → vOTU-051367
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter welbionis
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0377979
Biosample ID	SAMD00164819
Genome length (bp)	43,313 bps
CheckV completeness	100.00% (Complete)
CDS count	48
CDS density	94.23%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter welbionis	Total connections	61	Host agreement	90.16
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter welbionis	Total connections	6	Host agreement	83.33

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0377979_1	K01448	160.2	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0377979_1	phrog_435	247.5	0	endolysin	lysis
UniRef90	UHGV-0377979_1	UniRef90_U2SNJ2	720.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0377979_1	1226322.HMPREF1545_00782	720.0	0	N/A	N/A
Pfam	UHGV-0377979_1	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0377979_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0377979_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0377979_1	PF01520,PF09992,MF_00562,TIGR02883,COG0860,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_2	phrog_1980	60.5	2.5e-17	tail fiber protein	tail
UniRef90	UHGV-0377979_2	UniRef90_U2SWT4	624.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377979_2	1226322.HMPREF1545_00783	624.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-0377979_2	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0377979_2	PF07902,NF041249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0377979_3	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_4	phrog_511	304.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0377979_4	1226322.HMPREF1545_00785	922.0	0	N/A	N/A
structural_annotation	UHGV-0377979_4	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0377979_6	1226322.HMPREF1545_00786	500.0	0	N/A	N/A
UniRef90	UHGV-0377979_7	UniRef90_U2SNH2	3601.0	0	LPD23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377979_7	1226322.HMPREF1545_00787	3601.0	0	N/A	N/A
Pfam	UHGV-0377979_7	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0377979_7	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
UniRef90	UHGV-0377979_8	UniRef90_A0A0S2W165	177.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0377979_8	1120998.AUFC01000002_gene2673	172.0	0	N/A	N/A
Pfam	UHGV-0377979_8	PF00395	N/A	N/A	S-layer homology domain	SLH
KOfam	UHGV-0377979_9	K22300	52.6	0.000000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0377979_9	UniRef90_U2REI9	122.0	7.5e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0377979_9	1226322.HMPREF1545_04021	84.7	1.94e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0377979_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0377979_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0377979_9	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0377979_10	K07482	295.0	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-0377979_10	phrog_4646	398.0	0	transposase	integration and excision
UniRef90	UHGV-0377979_10	UniRef90_U2SNF5	575.0	0	ISTde2, transposase family protein (Fragment)	N/A
eggNOG-mapper	UHGV-0377979_10	1226322.HMPREF1545_00792	690.0	0	PFAM Integrase catalytic region	N/A
Pfam	UHGV-0377979_10	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
NCBIFam	UHGV-0377979_10	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-0377979_10	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-0377979_10	PF03400,PF13384,NF033563,COG2826	N/A	N/A	N/A	N/A
KOfam	UHGV-0377979_11	K07482	41.4	0.00000000002	K07482; transposase, IS30 family	N/A
PHROG	UHGV-0377979_11	phrog_11420	78.5	5.7e-23	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377979_11	UniRef90_U2QX08	185.0	0	HTH_38 domain-containing protein	N/A
eggNOG-mapper	UHGV-0377979_11	1519439.JPJG01000077_gene919	57.8	0.000000000899	Helix-turn-helix domain	N/A
Pfam	UHGV-0377979_11	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
eggNOG-mapper	UHGV-0377979_15	1226322.HMPREF1545_00300	446.0	0	N/A	N/A
Pfam	UHGV-0377979_18	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
structural_annotation	UHGV-0377979_18	PF13384	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_20	phrog_190	90.7	1.7e-26	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0377979_20	UniRef90_A0A845R8D4	146.0	1.43997e-41	N/A	N/A
eggNOG-mapper	UHGV-0377979_20	1226322.HMPREF1545_00295	236.0	0	N/A	N/A
Pfam	UHGV-0377979_20	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0377979_20	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0377979_21	K00571	165.5	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0377979_21	phrog_67	176.7	0	DNA methyltransferase	other
UniRef90	UHGV-0377979_21	UniRef90_UPI0005E19450	301.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0377979_21	1121097.JCM15093_1746	265.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0377979_21	MTase_II_00037	133.9	0	Type II methyltransferase	RM
Pfam	UHGV-0377979_21	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0377979_21	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0377979_21	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_22	phrog_5984	56.7	2.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0377979_22	1203606.HMPREF1526_01893	87.4	2.62e-20	N/A	N/A
PHROG	UHGV-0377979_23	phrog_25732	74.5	5.5e-22	N/A	unknown function
UniRef90	UHGV-0377979_23	UniRef90_UPI0018735939	117.0	8.75e-30	N/A	N/A
eggNOG-mapper	UHGV-0377979_24	1232449.BAHV02000016_gene1829	124.0	1.22e-34	N/A	N/A
PHROG	UHGV-0377979_26	phrog_424	61.7	1.4e-17	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0377979_26	1226322.HMPREF1545_00290	570.0	0	sulfate reduction	N/A
COG	UHGV-0377979_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0377979_26	PF01507,MF_01161,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_27	phrog_2245	76.9	2.2e-22	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0377979_27	1226322.HMPREF1545_00289	260.0	0	N/A	N/A
eggNOG-mapper	UHGV-0377979_29	1226322.HMPREF1545_00288	180.0	0	N/A	N/A
PHROG	UHGV-0377979_30	phrog_3584	210.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0377979_30	1226322.HMPREF1545_03841	502.0	0	N/A	N/A
PHROG	UHGV-0377979_31	phrog_606	43.7	0.0000000000031	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0377979_31	1519439.JPJG01000060_gene1884	173.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0377979_31	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0377979_31	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0377979_32	K21523	46.1	7.9e-19	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0377979_32	phrog_2	91.6	1.3e-26	terminase large subunit	head and packaging
UniRef90	UHGV-0377979_32	UniRef90_R6TQ60	563.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0377979_32	693746.OBV_23980	559.0	0	phage Terminase large subunit	N/A
COG	UHGV-0377979_32	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0377979_32	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_33	phrog_156	414.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0377979_33	1226322.HMPREF1545_03844	1223.0	0	N/A	N/A
structural_annotation	UHGV-0377979_33	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_34	phrog_30605	114.1	5.2e-34	N/A	unknown function
PHROG	UHGV-0377979_35	phrog_35275	453.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0377979_35	1226322.HMPREF1545_03846	432.0	0	N/A	N/A
PHROG	UHGV-0377979_36	phrog_24113	66.7	3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0377979_36	1519439.JPJG01000060_gene1889	111.0	1.72e-29	N/A	N/A
structural_annotation	UHGV-0377979_36	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_37	phrog_371	138.4	5.60001e-41	major head protein	head and packaging
UniRef90	UHGV-0377979_37	UniRef90_A0A1Y4TDW7	320.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0377979_37	1519439.JPJG01000060_gene1890	512.0	0	N/A	N/A
structural_annotation	UHGV-0377979_37	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_38	phrog_13126	495.8	0	beta-1,4-glycosyltransferase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0377979_38	UniRef90_U2ST91	734.0	0	Tetratricopeptide repeat protein (Fragment)	N/A
eggNOG-mapper	UHGV-0377979_38	1226322.HMPREF1545_03849	734.0	0	Glycosyl transferase, family 2	N/A
Pfam	UHGV-0377979_38	PF00535	N/A	N/A	Glycosyl transferase family 2	Glycos_transf_2
Pfam	UHGV-0377979_38	PF13428	N/A	N/A	Tetratricopeptide repeat	TPR_14
COG	UHGV-0377979_38	COG0463	N/A	N/A	Glycosyltransferase involved in cell wall bisynthesis	N/A
structural_annotation	UHGV-0377979_38	PF18768,PF13641,MF_00994,MF_00316,TIGR04195,COG0457,COG0463	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_39	phrog_12105	156.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0377979_39	1226322.HMPREF1545_03850	252.0	0	N/A	N/A
KOfam	UHGV-0377979_40	K06236	89.4	2.3e-26	COL1A; collagen type I alpha	N/A
PHROG	UHGV-0377979_40	phrog_8745	131.5	2.5e-39	tail fiber protein	tail
UniRef90	UHGV-0377979_40	UniRef90_A0A4D7AHL6	266.0	0	Collagen-like protein	N/A
eggNOG-mapper	UHGV-0377979_40	1226322.HMPREF1545_00064	89.0	4.15e-16	N/A	N/A
Pfam	UHGV-0377979_40	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-0377979_41	1226322.HMPREF1545_00128	84.7	6.27e-20	N/A	N/A
PHROG	UHGV-0377979_42	phrog_4628	90.5	1.7e-26	tail fiber assembly	tail
UniRef90	UHGV-0377979_42	UniRef90_UPI000DF39224	72.8	0.0000000000000897	phage tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0377979_42	1226322.HMPREF1545_01055	225.0	0	N/A	N/A
Pfam	UHGV-0377979_42	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-0377979_42	PF16778	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0377979_43	1226322.HMPREF1545_00064	94.7	8.28e-21	N/A	N/A
KOfam	UHGV-0377979_44	K04763	249.3	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0377979_44	phrog_1	192.3	0	integrase	integration and excision
UniRef90	UHGV-0377979_44	UniRef90_U2SWT8	603.0	0	Phage integrase, SAM-like domain protein	N/A
eggNOG-mapper	UHGV-0377979_44	1226322.HMPREF1545_00778	603.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0377979_44	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0377979_44	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0377979_44	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0377979_44	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_45	phrog_199	54.4	0.0000000000000016	holin	lysis
UniRef90	UHGV-0377979_45	UniRef90_U2RDN9	303.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0377979_45	1226322.HMPREF1545_00779	303.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0377979_45	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
COG	UHGV-0377979_45	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0377979_45	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0377979_46	phrog_23092	210.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0377979_46	1226322.HMPREF1545_00780	221.0	0	N/A	N/A
PHROG	UHGV-0377979_47	phrog_9467	218.7	0	N/A	unknown function
UniRef90	UHGV-0377979_47	UniRef90_A0A8J6M9F5	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0377979_47	1226322.HMPREF1545_00781	471.0	0	N/A	N/A
Pfam	UHGV-0377979_47	PF13876	N/A	N/A	N/A	Phage_gp49_66
Pfam	UHGV-0377979_47	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0377979_47	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0377979_47	PF11195	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0377979_48	1226322.HMPREF1545_00782	191.0	0	N/A	N/A
COG	UHGV-0377979_48	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0377979	Yes	43,313	61	100	1
UHGV-1498195	No	64,683	57	100	1
UHGV-0471479	No	47,291	61	100	1
UHGV-0877732	No	42,760	61	97	1
UHGV-2052416	No	40,434	62	92	1
UHGV-0774153	No	26,431	60	60	1
UHGV-0829161	No	24,855	63	56	1
UHGV-2030620	No	22,077	61	50	1
UHGV-2124883	No	21,525	61	49	1
UHGV-2095774	No	21,208	62	48	1
UHGV-1999660	No	19,840	62	45	1
UHGV-0147757	No	19,009	61	43	1
UHGV-1838088	No	17,585	63	40	1
UHGV-1768431	No	17,461	61	40	1
UHGV-1818608	No	16,948	63	39	1
UHGV-1789103	No	16,739	61	38	1
UHGV-1756779	No	20,347	48	37	1
UHGV-1577306	No	19,318	52	37	1
UHGV-2192898	No	15,748	63	36	1
UHGV-1841717	No	19,560	48	36	1
UHGV-1806577	No	13,497	63	31	1
UHGV-1645255	No	15,550	49	28	1
UHGV-0393298	No	12,287	61	28	1
UHGV-1804847	No	14,868	49	27	1
UHGV-0148297	No	11,652	60	26	1
UHGV-1628201	No	11,605	63	26	1
UHGV-1617363	No	11,584	64	26	1
UHGV-0859316	No	10,886	58	25	1
UHGV-1706420	No	10,745	64	25	1
UHGV-1613393	No	13,264	49	24	1
UHGV-1622115	No	10,523	59	24	1