vOTU vOTU-051723

vOTU: vOTU-051723

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-051723
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vSUBFAM-01638 → vGENUS-10781 → vSUBGEN-14575 → vOTU-051723
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0385102
Biosample ID	SAMN09711282
Genome length (bp)	36,182 bps
CheckV completeness	100.00% (Complete)
CDS count	48
CDS density	94.21%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0385102_1	K00558	164.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0385102_1	phrog_116	186.3	0	DNA methyltransferase	other
UniRef90	UHGV-0385102_1	UniRef90_UPI000404BE1E	271.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0385102_1	445972.ANACOL_03332	277.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0385102_1	oMTase_00004	266.1	0	orphan methyltransferase	RM
Pfam	UHGV-0385102_1	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0385102_1	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0385102_1	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0385102_1	PF01189,MF_00786,TIGR00406,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_2	K02315	164.7	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0385102_2	phrog_50	160.3	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385102_2	UniRef90_F7V9D6	157.0	6.9084e-43	Putative DnaC	N/A
eggNOG-mapper	UHGV-0385102_2	1399942.U3PBJ1_9CAUD	156.0	2.24208e-43	IstB-like ATP binding protein	N/A
Pfam	UHGV-0385102_2	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-0385102_2	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_3	phrog_15768	100.1	2.5e-29	N/A	unknown function
UniRef90	UHGV-0385102_3	UniRef90_A0A1C6CBN6	85.5	2.16e-16	N/A	N/A
eggNOG-mapper	UHGV-0385102_3	1077285.AGDG01000032_gene4172	86.7	7.69e-18	N/A	N/A
Pfam	UHGV-0385102_3	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0385102_3	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_4	K01160	42.6	0.000000000015	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0385102_4	phrog_1682	68.5	1.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385102_4	UniRef90_R7FGZ0	111.0	4.28e-29	Gp63	N/A
eggNOG-mapper	UHGV-0385102_4	997350.HMPREF9129_1668	88.6	6.42e-21	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0385102_4	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0385102_4	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_5	phrog_659	210.0	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385102_5	UniRef90_UPI001C7D2471	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0385102_5	411490.ANACAC_00805	164.0	0	N/A	N/A
Pfam	UHGV-0385102_5	PF06378	N/A	N/A	N/A	DUF1071
PHROG	UHGV-0385102_7	phrog_253	117.2	1.2e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385102_7	UniRef90_A0A833C9J0	79.3	0.00000000000000135	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0385102_7	1562701.BBOF01000011_gene42	69.3	0.00000000000144	Siphovirus Gp157	N/A
Pfam	UHGV-0385102_7	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0385102_7	PF05565,NF002139	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_12	K07729	44.9	0.0000000000024	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0385102_12	phrog_3	47.2	0.0000000000009	transcriptional repressor	transcription regulation
UniRef90	UHGV-0385102_12	UniRef90_UPI001E4BE5AC	48.5	0.00000647	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0385102_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0385102_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0385102_12	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_13	K23779	42.0	0.000000000017	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
Pfam	UHGV-0385102_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0385102_14	K14059	153.5	2.8026e-45	int; integrase	N/A
PHROG	UHGV-0385102_14	phrog_1	131.3	8.1e-39	integrase	integration and excision
UniRef90	UHGV-0385102_14	UniRef90_A0A316QM90	362.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0385102_14	342451.SSP1947	65.5	0.00000000861	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0385102_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0385102_14	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-0385102_21	phrog_4492	79.9	1.9e-23	tail fiber protein	tail
PHROG	UHGV-0385102_22	phrog_35419	46.6	0.00000000000059	tail fiber protein	tail
eggNOG-mapper	UHGV-0385102_22	913865.DOT_2884	60.8	0.00000255	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0385102_22	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0385102_23	PF06013,MF_00683,NF003844,COG4842	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385102_24	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_28	phrog_1281	136.2	1.3e-40	N/A	unknown function
UniRef90	UHGV-0385102_28	UniRef90_A0A853JSJ4	158.0	0	SocA family protein	N/A
eggNOG-mapper	UHGV-0385102_28	1227268.HMPREF1552_00030	153.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0385102_28	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0385102_28	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385102_28	PF13274,COG3600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0385102_29	1227268.HMPREF1552_00029	66.6	0.00000000000722	N/A	N/A
structural_annotation	UHGV-0385102_31	PF09393,PF05561,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385102_32	UniRef90_A0A2Z4GU91	103.0	1.2e-26	Minor capsid protein	N/A
structural_annotation	UHGV-0385102_33	PF07405,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385102_35	UniRef90_A0A2Z4GUC0	664.0	0	Chitobiase/beta-hexosaminidase	N/A
eggNOG-mapper	UHGV-0385102_35	335541.Swol_0141	72.0	0.000000000241	nucleotide catabolic process	N/A
Pfam	UHGV-0385102_35	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
COG	UHGV-0385102_35	COG0737	N/A	N/A	2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family	N/A
structural_annotation	UHGV-0385102_35	PF05065,PF13620,MF_04119,TIGR04387,TIGR04134,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_37	phrog_581	103.3	2.3e-30	minor head protein	head and packaging
UniRef90	UHGV-0385102_37	UniRef90_A0A2Z4GUI4	243.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0385102_37	997296.PB1_16234	73.6	0.0000000000113	Phage minor capsid protein 2	N/A
Pfam	UHGV-0385102_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0385102_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385102_37	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_38	phrog_533	55.3	1.1e-23	portal protein	head and packaging
UniRef90	UHGV-0385102_38	UniRef90_A0A2Z4GUT7	691.0	0	Portal protein	N/A
structural_annotation	UHGV-0385102_38	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_39	K06909	145.5	4.40008e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0385102_39	phrog_3717	84.9	7.5e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0385102_39	UniRef90_A0A2Z4GUK2	692.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0385102_39	762051.LKI_09665	122.0	1.04e-27	Terminase RNAseH like domain	N/A
Pfam	UHGV-0385102_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0385102_39	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-0385102_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0385102_39	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385102_40	UniRef90_A0A414AGA1	71.2	0.000000000000414	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0385102_40	1235790.C805_00037	67.8	0.00000000000185	N/A	N/A
Pfam	UHGV-0385102_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0385102_40	PF02796,NF040785	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_41	phrog_36	54.0	0.0000000000000035	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0385102_41	PF07374,MF_00674,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_42	phrog_8684	96.8	7.7e-29	N/A	unknown function
UniRef90	UHGV-0385102_42	UniRef90_U4R416	104.0	9.85e-26	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0385102_42	1121097.JCM15093_2710	91.7	1.65e-21	YopX protein	N/A
Pfam	UHGV-0385102_42	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0385102_42	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0385102_42	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_43	K00390	100.0	2e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0385102_43	phrog_424	126.3	2.3e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0385102_43	UniRef90_UPI001D07F2A4	225.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0385102_43	397291.C804_05723	216.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
PADLOC	UHGV-0385102_43	BrxP_00001	70.3	2.3e-20	BrxP	BREX
Pfam	UHGV-0385102_43	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0385102_43	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0385102_43	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0385102_47	K03111	143.1	2.90069e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0385102_47	phrog_44	142.4	2.49992e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385102_47	UniRef90_A0A355V3M4	161.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0385102_47	768710.DesyoDRAFT_5235	115.0	2.16e-31	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0385102_47	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0385102_47	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0385102_47	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0385102_47	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0385102_47	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0385102_48	phrog_16528	63.6	5.2e-23	DNA methyltransferase	other
UniRef90	UHGV-0385102_48	UniRef90_UPI0011C96572	145.0	1.71e-37	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0385102_48	498761.HM1_2947	113.0	5.48e-25	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-0385102_48	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0385102_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0385102	Yes	36,182	44	100	1