vOTU vOTU-051821

vOTU: vOTU-051821

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-051821
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-01157 → vSUBGEN-07513 → vOTU-051821
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium sp900539945
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0385857
Biosample ID	N/A
Genome length (bp)	32,370 bps
CheckV completeness	100.00% (Complete)
CDS count	45
CDS density	94.55%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Actinobacteriota	Total connections	6	Host agreement	50
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium sp900539945	Total connections	63	Host agreement	93.65

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0385857_2	phrog_263	80.4	1.4e-23	holin	lysis
UniRef90	UHGV-0385857_2	UniRef90_A0A3E2UFE4	135.0	6.89999e-40	Phage holin	N/A
eggNOG-mapper	UHGV-0385857_2	748224.HMPREF9436_01413	131.0	6.38e-39	SPP1 phage holin	N/A
Pfam	UHGV-0385857_2	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0385857_2	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0385857_2	PF04688	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_3	phrog_1863	69.0	3.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0385857_3	748224.HMPREF9436_01412	101.0	3.09e-27	N/A	N/A
KOfam	UHGV-0385857_4	K08640	104.0	2.4e-30	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0385857_4	phrog_894	112.9	3.1e-33	endolysin	lysis
UniRef90	UHGV-0385857_4	UniRef90_A0A1C5NY12	232.0	0	Zinc D-Ala-D-Ala carboxypeptidase	N/A
eggNOG-mapper	UHGV-0385857_4	748224.HMPREF9436_03320	227.0	0	Peptidase M15	N/A
Pfam	UHGV-0385857_4	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0385857_4	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385857_4	PF05951,COG3108	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0385857_5	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-0385857_6	phrog_9534	251.4	0	head protein	head and packaging
eggNOG-mapper	UHGV-0385857_6	748224.HMPREF9436_00702	314.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0385857_6	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_7	phrog_538	124.7	6.8e-37	minor tail protein	tail
UniRef90	UHGV-0385857_7	UniRef90_A0A4U7JBL2	84.7	0.00000000000000791	Siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0385857_7	755731.Clo1100_0557	92.4	2.63e-18	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0385857_7	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0385857_7	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_8	phrog_36410	46.7	0.00000000000046	N/A	unknown function
UniRef90	UHGV-0385857_8	UniRef90_A0A564T4N7	391.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0385857_8	748224.HMPREF9436_00700	513.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0385857_8	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_9	phrog_28775	293.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0385857_9	748224.HMPREF9436_00699	1090.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0385857_9	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_10	phrog_1633	51.0	0.000000000000025	N/A	unknown function
UniRef90	UHGV-0385857_10	UniRef90_UPI001C392A95	58.5	0.00000000737	N/A	N/A
PHROG	UHGV-0385857_11	phrog_1526	74.3	1.3e-21	N/A	unknown function
UniRef90	UHGV-0385857_11	UniRef90_A0A123T5V6	61.6	0.000000000186	N/A	N/A
eggNOG-mapper	UHGV-0385857_11	1214184.ALKY01000039_gene911	60.5	0.0000000000885	N/A	N/A
PHROG	UHGV-0385857_12	phrog_117	178.9	0	major tail protein	tail
UniRef90	UHGV-0385857_12	UniRef90_E2ZGB2	306.0	0	Prophage LambdaSa1, structural protein	N/A
eggNOG-mapper	UHGV-0385857_12	748224.HMPREF9436_00696	306.0	0	domain, Protein	N/A
COG	UHGV-0385857_12	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385857_12	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_13	phrog_123	63.0	5.2e-18	tail terminator	connector
eggNOG-mapper	UHGV-0385857_13	748224.HMPREF9436_00695	114.0	1.46e-31	N/A	N/A
structural_annotation	UHGV-0385857_13	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_14	phrog_387	74.4	9.4e-22	neck protein	connector
UniRef90	UHGV-0385857_14	UniRef90_A0A4U9XLC1	65.5	0.00000000000646	N/A	N/A
eggNOG-mapper	UHGV-0385857_14	748224.HMPREF9436_00694	167.0	0	N/A	N/A
PHROG	UHGV-0385857_15	phrog_501	80.9	1.3e-23	head closure Hc1	connector
UniRef90	UHGV-0385857_15	UniRef90_A0A139QHM6	117.0	6.77e-32	Phage-associated protein	N/A
eggNOG-mapper	UHGV-0385857_15	748224.HMPREF9436_00693	136.0	2.57e-40	N/A	N/A
structural_annotation	UHGV-0385857_15	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_16	phrog_137	108.7	3.1e-32	head-tail adaptor Ad1	connector
UniRef90	UHGV-0385857_16	UniRef90_A0A564SC88	208.0	0	Phage protein Gp19/Gp15/Gp42	N/A
eggNOG-mapper	UHGV-0385857_16	768726.HMPREF9178_1061	156.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0385857_16	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0385857_16	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_18	phrog_32396	129.5	8.8e-39	N/A	unknown function
UniRef90	UHGV-0385857_18	UniRef90_A0A564SB39	541.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0385857_18	1321784.HMPREF1987_01073	368.0	0	Phage capsid family	N/A
Pfam	UHGV-0385857_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0385857_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0385857_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_19	phrog_233	85.2	8e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0385857_19	UniRef90_A0A2S0L5H5	91.3	7.9e-21	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-0385857_19	706433.HMPREF9430_01266	85.5	2.67e-19	N/A	N/A
structural_annotation	UHGV-0385857_19	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_20	phrog_17688	324.1	0	N/A	unknown function
UniRef90	UHGV-0385857_20	UniRef90_A0A564SCG0	797.0	0	Phage Terminase	N/A
eggNOG-mapper	UHGV-0385857_20	936375.HMPREF1152_0677	634.0	0	phage terminase, large subunit	N/A
COG	UHGV-0385857_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0385857_20	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_21	phrog_478	126.6	1e-37	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0385857_21	UniRef90_A0A373Q857	168.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0385857_21	1111121.HMPREF1247_0834	98.2	1.39e-24	N/A	N/A
PHROG	UHGV-0385857_23	phrog_2494	291.6	0	minor head protein	head and packaging
UniRef90	UHGV-0385857_23	UniRef90_UPI001F3BD4CE	236.0	0	polymorphic toxin type 50 domain-containing protein	N/A
eggNOG-mapper	UHGV-0385857_23	1321372.AQQB01000060_gene59	226.0	0	N/A	N/A
PHROG	UHGV-0385857_24	phrog_104	286.9	0	portal protein	head and packaging
UniRef90	UHGV-0385857_24	UniRef90_A0A564SBV0	694.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0385857_24	665950.HMPREF1025_02537	563.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0385857_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0385857_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_25	phrog_338	99.9	3.1e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385857_25	UniRef90_A0A564SBG0	189.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0385857_25	1280698.AUJS01000007_gene1032	169.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-0385857_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0385857_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0385857_25	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_26	phrog_36	78.3	1.1e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0385857_26	UniRef90_A0A3A6JSY6	92.4	2.04e-21	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0385857_26	748224.HMPREF9436_01463	101.0	1.29e-25	N/A	N/A
structural_annotation	UHGV-0385857_26	PF04545,MF_00674,NF005248,COG1595	N/A	N/A	N/A	N/A
KOfam	UHGV-0385857_27	K01160	48.0	0.00000000000032	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0385857_27	phrog_140	95.4	6e-28	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385857_27	UniRef90_UPI00122CFAB3	244.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0385857_27	394503.Ccel_3302	146.0	2.43826e-43	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0385857_27	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0385857_27	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0385857_27	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0385857_28	K07505	371.4	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0385857_28	phrog_2597	1092.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385857_28	UniRef90_A0A2A7AI73	1336.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0385857_28	742738.HMPREF9460_01357	875.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0385857_28	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0385857_28	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0385857_28	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0385857_28	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0385857_29	K17677	350.2	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0385857_29	phrog_16	276.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385857_29	UniRef90_A0A3A6K1C0	1001.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0385857_29	610130.Closa_1369	769.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0385857_29	mREase_IV_00005	139.9	2.09999e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0385857_29	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0385857_29	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0385857_29	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0385857_29	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_30	phrog_2698	192.4	0	N/A	unknown function
UniRef90	UHGV-0385857_30	UniRef90_A0A291T9B6	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-0385857_30	394503.Ccel_3308	132.0	3.49e-37	N/A	N/A
structural_annotation	UHGV-0385857_30	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_31	phrog_124	233.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0385857_31	UniRef90_UPI00122C2B12	553.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0385857_31	645991.Sgly_0321	362.0	0	AAA domain	N/A
Pfam	UHGV-0385857_31	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0385857_31	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0385857_32	K03546	49.8	0.000000000000036	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0385857_32	phrog_1499	451.6	0	N/A	unknown function
UniRef90	UHGV-0385857_32	UniRef90_A0A2A7AIJ9	685.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0385857_32	641112.ACOK01000073_gene2873	480.0	0	domain protein	N/A
Pfam	UHGV-0385857_32	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0385857_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0385857_32	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_33	phrog_1733	76.6	2.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0385857_33	665956.HMPREF1032_03597	174.0	5.60519e-44	DNA binding	N/A
COG	UHGV-0385857_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0385857_33	PF03677	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385857_34	UniRef90_UPI001D0E65C2	158.0	0	N/A	N/A
structural_annotation	UHGV-0385857_34	PF12957	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0385857_36	PF07875,TIGR02501	N/A	N/A	N/A	N/A
UniRef90	UHGV-0385857_40	UniRef90_A0A2A7BGV7	76.3	1.58e-16	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0385857_40	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0385857_40	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0385857_40	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0385857_41	K07729	50.2	0.000000000000051	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0385857_41	phrog_7241	41.3	0.000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0385857_41	UniRef90_A0A3A6CNZ7	124.0	7.02e-36	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0385857_41	411465.PEPMIC_00039	53.5	0.0000000138	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0385857_41	retron_type_VI_hth_cluster2_1	48.3	0.00000000000031	N/A	Retron
Pfam	UHGV-0385857_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0385857_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0385857_41	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0385857_42	K01356	151.5	8.40779e-45	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0385857_42	phrog_4	125.2	6.1e-37	transcriptional repressor	transcription regulation
UniRef90	UHGV-0385857_42	UniRef90_A0A2A7BH16	261.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0385857_42	657322.FPR_01410	156.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0385857_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0385857_42	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0385857_42	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0385857_42	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-0385857_44	phrog_17982	100.3	1.7e-29	N/A	unknown function
UniRef90	UHGV-0385857_44	UniRef90_A0A3A6C848	80.9	0.0000000000000194	NINE protein	N/A
eggNOG-mapper	UHGV-0385857_44	720554.Clocl_1541	90.9	5.17e-18	N/A	N/A
Pfam	UHGV-0385857_44	PF14020	N/A	N/A	N/A	DUF4236
Pfam	UHGV-0385857_44	PF08797	N/A	N/A	HIRAN domain	HIRAN
KOfam	UHGV-0385857_45	K14059	161.3	0	int; integrase	N/A
PHROG	UHGV-0385857_45	phrog_1	146.4	2.39622e-43	integrase	integration and excision
UniRef90	UHGV-0385857_45	UniRef90_A0A316RZQ6	538.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0385857_45	693746.OBV_25530	278.0	0	Phage integrase family	N/A
Pfam	UHGV-0385857_45	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0385857_45	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0385857_45	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0385857	Yes	32,370	60	100	1
UHGV-0059853	No	33,296	60	91	1
UHGV-2170542	No	26,596	62	74	1
UHGV-1997943	No	26,249	62	72	1
UHGV-1540289	No	26,737	63	70	1
UHGV-1536162	No	26,542	62	70	1
UHGV-1499778	No	26,503	62	66	1
UHGV-1451939	No	24,797	63	63	1
UHGV-2142269	No	20,444	62	60	1
UHGV-1476478	No	17,235	61	51	1
UHGV-1731180	No	15,046	62	44	1
UHGV-1737945	No	13,304	63	39	1
UHGV-2056090	No	11,868	63	29	1