vOTU vOTU-051947

vOTU: vOTU-051947

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-051947
Number of genomes	12
Taxonomy (ICTV)	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Sutterella → Sutterella sp900762445
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-02381 → vGENUS-05159 → vSUBGEN-03194 → vOTU-051947
Host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Sutterella → Sutterella sp900762445
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0386936
Biosample ID	N/A
Genome length (bp)	44,768 bps
CheckV completeness	100.00% (Complete)
CDS count	47
CDS density	91.90%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Duodenibacillus → Duodenibacillus sp900767875	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Proteobacteria → Gammaproteobacteria → Burkholderiales → Burkholderiaceae → Sutterella → Sutterella sp900762445	Total connections	11	Host agreement	90.91

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0386936_2	phrog_1141	40.5	0.000000000035	tail fiber protein	tail
UniRef90	UHGV-0386936_2	UniRef90_K1JU46	124.0	1.84e-33	N/A	N/A
eggNOG-mapper	UHGV-0386936_2	742823.HMPREF9465_01297	124.0	3.08e-34	N/A	N/A
Pfam	UHGV-0386936_2	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0386936_2	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_3	phrog_3342	79.6	2.2e-23	N/A	unknown function
UniRef90	UHGV-0386936_3	UniRef90_A0A6L6YMG8	103.0	3.79e-27	Pseudouridine synthase	N/A
eggNOG-mapper	UHGV-0386936_3	556268.OFAG_02319	84.0	2.62e-20	N/A	N/A
PHROG	UHGV-0386936_5	phrog_785	57.8	1.2e-16	holin	lysis
UniRef90	UHGV-0386936_5	UniRef90_UPI001C254033	58.2	0.0000000117	phage holin family protein	N/A
eggNOG-mapper	UHGV-0386936_5	742823.HMPREF9465_00919	107.0	8.74e-29	LydA holin phage, holin superfamily III	N/A
Pfam	UHGV-0386936_5	PF16083	N/A	N/A	LydA holin phage, holin superfamily III	Phage_holin_3_3
structural_annotation	UHGV-0386936_5	PF16083,TIGR01594	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_6	K01185	120.2	2.3e-35	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0386936_6	phrog_7	149.4	2.38221e-44	endolysin	lysis
UniRef90	UHGV-0386936_6	UniRef90_A0A2X4Y450	119.0	1.01e-31	Lysozyme	N/A
eggNOG-mapper	UHGV-0386936_6	1332071.L581_2452	113.0	6.3e-30	Phage lysozyme	N/A
Pfam	UHGV-0386936_6	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
COG	UHGV-0386936_6	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
HAMAP	UHGV-0386936_6	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0386936_6	PF00959,MF_04110,COG3772	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_9	K14059	72.7	6.6e-21	int; integrase	N/A
PHROG	UHGV-0386936_9	phrog_1	134.0	1.5e-39	integrase	integration and excision
UniRef90	UHGV-0386936_9	UniRef90_A0A139K4Z7	363.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0386936_9	469610.HMPREF0189_01846	292.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0386936_9	PF13356	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_3
Pfam	UHGV-0386936_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0386936_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0386936_9	PF00589,PF13356,PF14659,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_13	K03111	72.8	7.7e-21	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0386936_13	phrog_44	74.0	3.1e-21	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0386936_13	UniRef90_A0A847YDM8	76.3	0.00000000000000773	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0386936_13	1396141.BATP01000035_gene4095	66.6	0.00000000000928	Single-strand binding protein family	N/A
Pfam	UHGV-0386936_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0386936_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0386936_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0386936_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_15	K07455	272.1	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0386936_15	phrog_148	237.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0386936_15	UniRef90_K1K078	271.0	0	Phage RecT family recombinase	N/A
eggNOG-mapper	UHGV-0386936_15	742823.HMPREF9465_00243	271.0	0	RecT family	N/A
Pfam	UHGV-0386936_15	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0386936_15	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0386936_15	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0386936_15	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_16	phrog_434	303.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0386936_16	UniRef90_K1JX53	360.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0386936_16	742823.HMPREF9465_00242	360.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0386936_16	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0386936_16	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0386936_16	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0386936_16	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_18	phrog_130	128.5	5.9e-38	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0386936_18	UniRef90_A0A139K4R0	226.0	0	BRO family protein	N/A
eggNOG-mapper	UHGV-0386936_18	1203554.HMPREF1476_00228	211.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0386936_18	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0386936_18	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0386936_18	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_19	phrog_6191	140.9	6.00036e-42	N/A	unknown function
eggNOG-mapper	UHGV-0386936_19	1205908.AKXW01000119_gene519	68.2	0.000000000524	N/A	N/A
structural_annotation	UHGV-0386936_19	PF12857,NF009730,COG5569	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_20	phrog_9226	148.6	4.2039e-44	N/A	unknown function
eggNOG-mapper	UHGV-0386936_20	392500.Swoo_1401	89.7	3.43e-18	N/A	N/A
KOfam	UHGV-0386936_21	K01356	50.9	0.000000000000035	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0386936_21	phrog_4	130.6	1.3e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-0386936_21	UniRef90_UPI0013F65340	228.0	0	LexA family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0386936_21	469610.HMPREF0189_01093	195.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0386936_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0386936_21	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0386936_21	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0386936_21	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0386936_22	PF15943,NF007282	N/A	N/A	N/A	N/A
UniRef90	UHGV-0386936_23	UniRef90_UPI000B1FAB70	52.4	0.00000176	YdaU family protein	N/A
eggNOG-mapper	UHGV-0386936_23	520709.F985_01891	52.4	0.00000154	N/A	N/A
COG	UHGV-0386936_23	COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_24	phrog_21472	95.1	3.8e-28	N/A	unknown function
UniRef90	UHGV-0386936_24	UniRef90_UPI001F4070C9	99.4	8.93e-21	YdaU family protein	N/A
eggNOG-mapper	UHGV-0386936_24	1247726.MIM_c10690	90.9	2.03e-18	N/A	N/A
COG	UHGV-0386936_24	COG3756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0386936_24	PF07120,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_25	K02315	140.8	1.10002e-41	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0386936_25	phrog_50	125.4	4.5e-37	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0386936_25	UniRef90_UPI0013F647C6	141.0	1.44e-36	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0386936_25	742823.HMPREF9465_00892	99.0	4.8e-21	DNA-dependent DNA replication	N/A
Pfam	UHGV-0386936_25	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0386936_25	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0386936_25	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
UniRef90	UHGV-0386936_27	UniRef90_UPI0019621ACA	72.8	0.0000000000000692	endonuclease	N/A
eggNOG-mapper	UHGV-0386936_27	1203554.HMPREF1476_00244	125.0	2.75e-35	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0386936_27	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0386936_27	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_28	K06919	74.5	1.1e-21	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0386936_28	phrog_2478	392.7	0	DNA polymerase/primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0386936_28	UniRef90_Q775B5	406.0	0	Bbp29	N/A
eggNOG-mapper	UHGV-0386936_28	194699.Q775B5_BPBPP	406.0	0	D5 N terminal like	N/A
Pfam	UHGV-0386936_28	PF08706	N/A	N/A	D5 N terminal like	D5_N
NCBIFam	UHGV-0386936_28	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
UniRef90	UHGV-0386936_30	UniRef90_K0M8R8	61.2	0.000000000253	N/A	N/A
eggNOG-mapper	UHGV-0386936_30	360910.BAV0416	54.3	0.0000000133	N/A	N/A
structural_annotation	UHGV-0386936_30	PF02796	N/A	N/A	N/A	N/A
KOfam	UHGV-0386936_31	K07474	93.6	4.1e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0386936_31	phrog_51	88.8	5.7e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0386936_31	UniRef90_A0A0U9HE40	66.2	0.000000000214	Terminase	N/A
eggNOG-mapper	UHGV-0386936_31	1196028.ALEF01000043_gene470	70.9	0.000000000000649	Terminase small subunit	N/A
Pfam	UHGV-0386936_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0386936_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0386936_33	K06909	52.9	0.0000000000000052	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0386936_33	phrog_5902	194.7	0	N/A	unknown function
UniRef90	UHGV-0386936_33	UniRef90_UPI001883BDB5	502.0	0	terminase	N/A
eggNOG-mapper	UHGV-0386936_33	1122135.KB893135_gene619	407.0	0	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD	N/A
COG	UHGV-0386936_33	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0386936_33	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_34	phrog_1249	44.9	0.0000000000016	acetyltransferase	other
eggNOG-mapper	UHGV-0386936_34	1072685.IX83_07115	50.8	0.00000721	Acetyltransferase (GNAT) family	N/A
Pfam	UHGV-0386936_34	PF00583	N/A	N/A	Acetyltransferase (GNAT) family	Acetyltransf_1
COG	UHGV-0386936_34	COG3375	N/A	N/A	Predicted acetyltransferase, GNAT superfamily	N/A
structural_annotation	UHGV-0386936_34	PF00583,MF_02210,NF007530,COG0456	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_35	phrog_12032	40.0	0.000000000042	short tail fiber protein	tail
eggNOG-mapper	UHGV-0386936_35	360910.BAV0420	87.8	4.13e-20	N/A	N/A
structural_annotation	UHGV-0386936_35	PF11699,MF_01255,NF009806,COG4766	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_37	phrog_332	460.4	0	head-tail adaptor	connector
UniRef90	UHGV-0386936_37	UniRef90_UPI0013EFF634	406.0	0	portal protein	N/A
eggNOG-mapper	UHGV-0386936_37	469610.HMPREF0189_01108	417.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-0386936_37	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-0386936_37	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_38	phrog_528	78.5	4.5e-23	N/A	unknown function
UniRef90	UHGV-0386936_38	UniRef90_A0A7Z0ML12	66.2	0.00000000000712	Endopeptidase	N/A
eggNOG-mapper	UHGV-0386936_38	1003200.AXXA_28000	65.1	0.00000000000362	N/A	N/A
PHROG	UHGV-0386936_39	phrog_458	97.7	1.5e-28	protease	other
UniRef90	UHGV-0386936_39	UniRef90_A0A6J5KV81	104.0	9.91e-24	Putative protease	N/A
eggNOG-mapper	UHGV-0386936_39	1114964.L485_00960	68.2	0.000000000108	N/A	N/A
PHROG	UHGV-0386936_40	phrog_212	77.5	1.8e-39	major head protein	head and packaging
UniRef90	UHGV-0386936_40	UniRef90_A0A6M3K245	149.0	6.97e-39	Putative major capsid protein	N/A
eggNOG-mapper	UHGV-0386936_40	1401067.HMPREF0872_06795	164.0	2.8026e-45	N/A	N/A
Pfam	UHGV-0386936_40	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0386936_40	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_41	phrog_427	49.8	0.000000000000054	N/A	unknown function
structural_annotation	UHGV-0386936_41	PF21190,NF041539,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_42	phrog_394	133.8	8.99999e-40	tail protein	tail
UniRef90	UHGV-0386936_42	UniRef90_K0MCD7	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-0386936_42	557598.LHK_01545	166.0	0	N/A	N/A
structural_annotation	UHGV-0386936_42	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_43	phrog_376	446.6	0	tail protein	tail
UniRef90	UHGV-0386936_43	UniRef90_K0ME22	620.0	0	N/A	N/A
eggNOG-mapper	UHGV-0386936_43	557598.LHK_01546	740.0	0	N/A	N/A
structural_annotation	UHGV-0386936_43	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-0386936_44	phrog_418	64.1	2.1e-18	internal virion protein	head and packaging
PHROG	UHGV-0386936_45	phrog_10475	51.4	1.5e-16	endolysin	lysis
PHROG	UHGV-0386936_46	phrog_9880	771.1	0	N/A	unknown function
UniRef90	UHGV-0386936_46	UniRef90_A0A238YRR4	622.0	0	LPD22 domain-containing protein	N/A
eggNOG-mapper	UHGV-0386936_46	194699.Q775D4_BPBPP	593.0	0	metallopeptidase activity	N/A
PHROG	UHGV-0386936_47	phrog_1640	84.6	1.7e-24	tail protein	tail
eggNOG-mapper	UHGV-0386936_47	1203554.HMPREF1476_00265	158.0	2.46e-39	Membrane	N/A
COG	UHGV-0386936_47	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0386936	Yes	44,768	52	100	1
UHGV-0047121	No	45,486	52	100	1
UHGV-1496085	No	45,486	52	100	1
UHGV-1431369	No	31,240	52	70	1
UHGV-0187376	No	31,172	52	70	1
UHGV-0076490	No	31,196	52	69	1
UHGV-1430873	No	31,196	52	69	1
UHGV-1419044	No	21,868	48	58	1
UHGV-1460272	No	22,557	55	51	1
UHGV-1382598	No	22,360	55	50	1
UHGV-1817774	No	13,070	50	29	1
UHGV-1782621	No	12,701	50	28	1