vOTU vOTU-052778

vOTU: vOTU-052778

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-052778
Number of genomes	14
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vGENUS-21214 → vSUBGEN-42252 → vOTU-052778
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0412800
Biosample ID	N/A
Genome length (bp)	42,195 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	92.25%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii	Total connections	204	Host agreement	81.37
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Hungatella → Hungatella effluvii	Total connections	11	Host agreement	72.73

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0412800_1	931276.Cspa_c27110	50.8	0.000000106	N/A	N/A
PHROG	UHGV-0412800_2	phrog_199	60.4	2.2e-17	holin	lysis
UniRef90	UHGV-0412800_2	UniRef90_D3AUA6	282.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0412800_2	428126.CLOSPI_02191	151.0	5.60519e-45	Bacteriophage holin family	N/A
Pfam	UHGV-0412800_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0412800_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0412800_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0412800_3	K11062	100.4	1.5e-29	entD; probable enterotoxin D	N/A
PHROG	UHGV-0412800_3	phrog_3088	175.8	0	amidase	lysis
UniRef90	UHGV-0412800_3	UniRef90_A0A174XN03	491.0	0	Putative N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0412800_3	1151292.QEW_0991	207.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0412800_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0412800_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0412800_3	PF01510,PF19127,MF_04111,NF008758,TIGR04035,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-0412800_4	K18830	47.3	0.00000000000047	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0412800_4	phrog_8	66.2	7.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0412800_4	UniRef90_A0A174NHN3	156.0	0	Transcriptional regulator, HTH-type	N/A
eggNOG-mapper	UHGV-0412800_4	1121289.JHVL01000006_gene2911	91.3	2.29e-23	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0412800_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0412800_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0412800_4	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0412800_9	UniRef90_A0A3A9H2Y4	54.7	0.0000000148	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0412800_9	397288.C806_00051	52.4	0.0000000214	N/A	N/A
KOfam	UHGV-0412800_15	K14059	76.4	6e-22	int; integrase	N/A
PHROG	UHGV-0412800_15	phrog_1	91.4	1.3e-26	integrase	integration and excision
UniRef90	UHGV-0412800_15	UniRef90_A0A174XEY3	776.0	0	Integrase family protein	N/A
eggNOG-mapper	UHGV-0412800_15	478749.BRYFOR_05407	527.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0412800_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0412800_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0412800_15	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_16	phrog_7854	53.5	0.0000000000000033	endolysin	lysis
UniRef90	UHGV-0412800_16	UniRef90_A0A174X6J3	420.0	0	Lipoprotein	N/A
eggNOG-mapper	UHGV-0412800_16	1128398.Curi_c22020	95.5	1.05e-20	cell wall binding repeat	N/A
Pfam	UHGV-0412800_16	PF19085	N/A	N/A	Choline-binding repeat	Choline_bind_2
COG	UHGV-0412800_16	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
PHROG	UHGV-0412800_17	phrog_87	67.3	1.7e-19	metallo-protease	other
UniRef90	UHGV-0412800_17	UniRef90_A0A174XJL5	288.0	0	Putative Zn peptidase	N/A
eggNOG-mapper	UHGV-0412800_17	742740.HMPREF9474_03480	224.0	0	N/A	N/A
Pfam	UHGV-0412800_17	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0412800_17	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0412800_17	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0412800_18	K22299	45.4	0.0000000000015	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0412800_18	phrog_8	53.2	0.0000000000000073	transcriptional regulator	transcription regulation
UniRef90	UHGV-0412800_18	UniRef90_A0A174XEG5	281.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0412800_18	742740.HMPREF9474_03481	162.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0412800_18	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0412800_18	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0412800_18	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_19	phrog_8	50.0	0.000000000000071	transcriptional regulator	transcription regulation
UniRef90	UHGV-0412800_19	UniRef90_A0A174XFS2	132.0	2.33e-39	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0412800_19	411460.RUMTOR_02057	86.7	5.57e-22	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0412800_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0412800_19	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_23	phrog_26484	129.5	7.8e-39	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_23	UniRef90_A0A174X6P5	158.0	0	Bacterial seryl-tRNA synthetase related	N/A
eggNOG-mapper	UHGV-0412800_23	411902.CLOBOL_02549	95.9	2.55e-25	Transcriptional Coactivator p15 (PC4)	N/A
Pfam	UHGV-0412800_23	PF02229	N/A	N/A	Transcriptional Coactivator p15 (PC4)	PC4
COG	UHGV-0412800_23	COG4443	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0412800_23	COG4443	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_24	phrog_22695	108.6	1.3e-32	N/A	unknown function
eggNOG-mapper	UHGV-0412800_24	1120746.CCNL01000014_gene2206	84.3	2e-18	N/A	N/A
KOfam	UHGV-0412800_25	K07465	46.8	0.00000000000042	K07465; putative RecB family exonuclease	N/A
PHROG	UHGV-0412800_25	phrog_69	330.6	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_25	UniRef90_UPI00189C4093	601.0	0	N/A	N/A
eggNOG-mapper	UHGV-0412800_25	1235799.C818_04197	536.0	0	N/A	N/A
Pfam	UHGV-0412800_25	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0412800_25	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0412800_25	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_26	phrog_112	201.9	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_26	UniRef90_UPI000E4307C9	403.0	0	N/A	N/A
eggNOG-mapper	UHGV-0412800_26	1235799.C818_04198	335.0	0	N/A	N/A
Pfam	UHGV-0412800_26	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0412800_26	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
KOfam	UHGV-0412800_27	K02334	850.8	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0412800_27	phrog_17	398.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_27	UniRef90_A0A174XFA1	1277.0	0	DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains	N/A
eggNOG-mapper	UHGV-0412800_27	1235799.C818_04199	975.0	0	DNA polymerase A domain	N/A
Pfam	UHGV-0412800_27	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0412800_27	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0412800_27	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_28	phrog_256	1042.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_28	UniRef90_A0A174X6U4	1647.0	0	Putative P-loop ATPase	N/A
eggNOG-mapper	UHGV-0412800_28	1235799.C818_04200	1188.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0412800_28	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0412800_28	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0412800_28	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_29	phrog_93	66.8	3.1e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_29	UniRef90_A0A174XGF2	225.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0412800_29	1235799.C818_04201	113.0	2.86e-31	VRR_NUC	N/A
KOfam	UHGV-0412800_30	K14440	119.2	8.4e-36	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0412800_30	phrog_62	413.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0412800_30	UniRef90_A0A174X759	925.0	0	DNA/RNA helicase, superfamily II, SNF2 family	N/A
eggNOG-mapper	UHGV-0412800_30	1235799.C818_04202	785.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0412800_30	ZorD1_00007	87.4	1.3e-25	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0412800_30	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0412800_30	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0412800_30	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0412800_30	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0412800_31	PF16535,NF011863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0412800_32	PF11331,TIGR02098	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0412800_33	PF21627	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0412800_35	PF07374,MF_00674,NF001074	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_39	phrog_606	63.7	3.1e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0412800_39	UniRef90_UPI001D088AD3	210.0	0	DNA-packaging protein	N/A
Pfam	UHGV-0412800_39	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0412800_39	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0412800_40	K06909	80.2	3.2e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0412800_40	phrog_2	55.7	0.0000000000000012	terminase large subunit	head and packaging
UniRef90	UHGV-0412800_40	UniRef90_A0A174NEI6	879.0	0	Phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0412800_40	1298920.KI911353_gene4856	635.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0412800_40	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0412800_40	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_41	phrog_533	275.1	0	portal protein	head and packaging
UniRef90	UHGV-0412800_41	UniRef90_A0A174NM20	992.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0412800_41	1117108.PAALTS15_13582	556.0	0	N/A	N/A
structural_annotation	UHGV-0412800_41	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_42	phrog_581	279.6	0	minor head protein	head and packaging
UniRef90	UHGV-0412800_42	UniRef90_A0A174NEA4	815.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0412800_42	1298920.KI911353_gene4854	490.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0412800_42	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0412800_42	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0412800_42	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_43	phrog_194	175.3	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0412800_43	UniRef90_A0A174NLQ6	370.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0412800_43	1151292.QEW_2434	140.0	1.86e-39	Phage minor structural protein GP20	N/A
Pfam	UHGV-0412800_43	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0412800_43	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_44	phrog_212	294.1	0	major head protein	head and packaging
UniRef90	UHGV-0412800_44	UniRef90_UPI001D004754	567.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0412800_44	1151292.QEW_2433	531.0	0	N/A	N/A
structural_annotation	UHGV-0412800_44	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_45	phrog_15682	73.0	3.3e-21	N/A	unknown function
UniRef90	UHGV-0412800_45	UniRef90_A0A841L8S8	79.7	7.33e-18	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0412800_45	1408823.AXUS01000024_gene2717	74.3	9.5e-17	N/A	N/A
PHROG	UHGV-0412800_46	phrog_541	70.5	2.4e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0412800_46	483218.BACPEC_01153	157.0	0	N/A	N/A
PHROG	UHGV-0412800_47	phrog_8710	145.1	1.59748e-43	N/A	unknown function
eggNOG-mapper	UHGV-0412800_47	1304866.K413DRAFT_0782	186.0	0	N/A	N/A
structural_annotation	UHGV-0412800_47	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_48	phrog_556	68.7	8e-20	minor head protein	head and packaging
UniRef90	UHGV-0412800_48	UniRef90_UPI0003798593	143.0	6.82993e-42	minor capsid protein	N/A
eggNOG-mapper	UHGV-0412800_48	1298920.KI911353_gene4846	172.0	0	N/A	N/A
Pfam	UHGV-0412800_48	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
PHROG	UHGV-0412800_49	phrog_2595	98.1	6.8e-29	head-tail connector protein	connector
UniRef90	UHGV-0412800_49	UniRef90_UPI00045E84DA	213.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0412800_49	1298920.KI911353_gene4845	213.0	0	N/A	N/A
Pfam	UHGV-0412800_49	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0412800_49	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_50	phrog_820	119.6	1.9e-35	major tail protein	tail
eggNOG-mapper	UHGV-0412800_50	1298920.KI911353_gene4844	256.0	0	N/A	N/A
structural_annotation	UHGV-0412800_50	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_51	phrog_8300	106.3	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0412800_51	1298920.KI911353_gene4843	109.0	1.87e-29	N/A	N/A
structural_annotation	UHGV-0412800_51	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_52	phrog_8355	113.2	6.5e-34	N/A	unknown function
UniRef90	UHGV-0412800_52	UniRef90_A0A174NJB8	181.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0412800_52	1298920.KI911353_gene4842	125.0	1.12e-36	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0412800_52	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0412800_52	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_53	phrog_1535	562.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0412800_53	UniRef90_A0A174NI32	1946.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0412800_53	1298920.KI911353_gene4841	833.0	0	SLT domain	N/A
COG	UHGV-0412800_53	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0412800_54	phrog_1194	64.4	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0412800_54	742740.HMPREF9474_03515	200.0	0	N/A	N/A
structural_annotation	UHGV-0412800_54	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_55	phrog_13879	340.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0412800_55	742740.HMPREF9474_03516	579.0	0	N/A	N/A
structural_annotation	UHGV-0412800_55	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_56	phrog_18725	71.8	7.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0412800_56	585501.HMPREF6123_0822	128.0	1.84e-36	N/A	N/A
PHROG	UHGV-0412800_57	phrog_30220	51.5	0.000000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0412800_57	1352230.S6B1J7_9CAUD	63.9	0.0000000319	N/A	N/A
structural_annotation	UHGV-0412800_57	PF20620,NF038128	N/A	N/A	N/A	N/A
PHROG	UHGV-0412800_60	phrog_19280	46.3	0.00000000000022	N/A	unknown function
UniRef90	UHGV-0412800_60	UniRef90_A0A174NC72	1337.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0412800_60	742733.HMPREF9469_00973	364.0	0	N/A	N/A
structural_annotation	UHGV-0412800_60	PF10651	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0412800	Yes	42,195	48	100	1
UHGV-0391611	No	43,049	48	100	1
UHGV-0392414	No	42,633	48	100	1
UHGV-0061111	No	42,038	49	100	1
UHGV-1390157	No	42,038	49	100	1
UHGV-0243172	No	40,258	49	96	1
UHGV-0390850	No	44,977	48	74	1
UHGV-1284713	No	26,828	50	64	1
UHGV-0192725	No	19,297	51	47	1
UHGV-1834514	No	18,415	48	47	1
UHGV-0389399	No	18,643	49	46	1
UHGV-0100488	No	17,468	51	43	1
UHGV-1767262	No	17,468	51	43	1
UHGV-1709283	No	10,457	50	25	1