vOTU vOTU-053296

vOTU: vOTU-053296

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-053296
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_D
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00190 → vSUBGEN-28630 → vOTU-053296
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0534197
Biosample ID	N/A
Genome length (bp)	42,477 bps
CheckV completeness	100.00% (Complete)
CDS count	71
CDS density	92.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	1084	Host agreement	97.97
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_D	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0534197_1	phrog_4433	126.0	3.5e-37	N/A	unknown function
UniRef90	UHGV-0534197_1	UniRef90_A0A6M5C839	95.9	3.84e-22	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0534197_1	33035.JPJF01000122_gene2458	103.0	1.59e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0534197_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0534197_2	phrog_373	132.8	2.8e-39	anti-repressor	transcription regulation
UniRef90	UHGV-0534197_2	UniRef90_UPI001CBC74BC	312.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0534197_2	1485543.JMME01000017_gene2258	132.0	7.51e-35	Phage regulatory protein	N/A
Pfam	UHGV-0534197_2	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0534197_2	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0534197_2	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0534197_2	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0534197_3	UniRef90_UPI0018995761	75.9	8.19e-17	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0534197_3	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_4	phrog_8	46.7	0.00000000000069	transcriptional regulator	transcription regulation
UniRef90	UHGV-0534197_4	UniRef90_UPI001E54DE4F	81.6	9e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0534197_4	1226322.HMPREF1545_00148	71.6	0.0000000000000194	Transcriptional	N/A
Pfam	UHGV-0534197_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0534197_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0534197_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_5	PF09202,MF_01819,NF041230,COG1321	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_8	phrog_4980	110.8	4.4e-33	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0534197_8	UniRef90_UPI000F643789	82.4	2.29e-16	Ltp family lipoprotein	N/A
eggNOG-mapper	UHGV-0534197_8	428127.EUBDOL_01530	76.6	0.0000000000000492	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0534197_8	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0534197_8	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0534197_8	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0534197_8	PF02631,MF_01114,NF001062,COG2137	N/A	N/A	N/A	N/A
UniRef90	UHGV-0534197_11	UniRef90_A0A6N7TLT0	210.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0534197_11	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0534197_11	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0534197_12	K14059	139.0	5.49996e-41	int; integrase	N/A
PHROG	UHGV-0534197_12	phrog_1	167.1	0	integrase	integration and excision
UniRef90	UHGV-0534197_12	UniRef90_A0A6N7TNQ4	707.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0534197_12	411471.SUBVAR_05137	265.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0534197_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0534197_12	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0534197_12	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_14	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_15	phrog_20016	200.6	0	N/A	unknown function
UniRef90	UHGV-0534197_15	UniRef90_A0A285PT46	217.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0534197_15	1226322.HMPREF1545_00077	186.0	0	N/A	N/A
structural_annotation	UHGV-0534197_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_16	phrog_16490	195.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0534197_16	397290.C810_01328	144.0	1.77e-38	N/A	N/A
PHROG	UHGV-0534197_17	phrog_22984	70.0	3.2e-20	N/A	unknown function
PHROG	UHGV-0534197_18	phrog_21718	88.2	1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0534197_18	397290.C810_05210	79.0	2.26e-16	N/A	N/A
PHROG	UHGV-0534197_19	phrog_3754	98.5	6.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-0534197_19	1235790.C805_00054	114.0	3.35e-31	N/A	N/A
KOfam	UHGV-0534197_21	K23779	58.8	1.4e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0534197_21	phrog_1373	43.7	0.0000000000034	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0534197_21	944479.JQLX01000018_gene150	56.2	0.000000167	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0534197_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0534197_21	COG0662	N/A	N/A	Mannose-6-phosphate isomerase, cupin superfamily	N/A
structural_annotation	UHGV-0534197_21	PF01381,TIGR03070,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0534197_25	UniRef90_UPI0018835F0C	440.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0534197_25	411483.FAEPRAA2165_00757	172.0	7.00649e-45	N/A	N/A
PHROG	UHGV-0534197_26	phrog_15303	77.0	2.2e-22	N/A	unknown function
KOfam	UHGV-0534197_28	K07273	147.2	1.4013e-43	acm; lysozyme	N/A
PHROG	UHGV-0534197_28	phrog_291	115.9	3.7e-34	endolysin	lysis
UniRef90	UHGV-0534197_28	UniRef90_A0A564U0D3	351.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0534197_28	718252.FP2_04890	255.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0534197_28	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0534197_28	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0534197_28	PF01183,NF003812,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-0534197_29	UniRef90_A0A2J4JSG1	80.9	4.26e-19	XkdX family protein	N/A
eggNOG-mapper	UHGV-0534197_29	718252.FP2_16990	80.5	9.91e-20	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-0534197_29	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-0534197_29	PF09693	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_31	phrog_10993	290.3	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0534197_31	UniRef90_D4JYQ1	423.0	0	N/A	N/A
eggNOG-mapper	UHGV-0534197_31	718252.FP2_16970	423.0	0	N/A	N/A
Pfam	UHGV-0534197_31	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0534197_31	PF19789,PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0534197_33	1235792.C808_00094	90.1	1.02e-19	phage tail	N/A
COG	UHGV-0534197_33	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0534197_33	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_34	phrog_3558	273.9	0	tail protein	tail
UniRef90	UHGV-0534197_34	UniRef90_UPI001C01D15B	681.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0534197_34	1120933.ATUY01000002_gene164	156.0	9.66e-38	Prophage endopeptidase tail	N/A
Pfam	UHGV-0534197_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0534197_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0534197_34	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_35	phrog_28775	121.5	1.2e-36	tail length tape measure protein	tail
UniRef90	UHGV-0534197_35	UniRef90_A0A844DDD5	654.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0534197_35	1492737.FEM08_12070	140.0	9.12e-32	tape measure	N/A
Pfam	UHGV-0534197_35	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0534197_35	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0534197_35	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0534197_35	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_38	phrog_885	58.0	1.2e-16	major tail protein	tail
eggNOG-mapper	UHGV-0534197_38	1111121.HMPREF1247_0789	96.7	2.64e-22	N/A	N/A
structural_annotation	UHGV-0534197_38	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_39	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_40	phrog_17977	42.7	0.0000000000083	N/A	unknown function
UniRef90	UHGV-0534197_40	UniRef90_A0A844DHJ8	120.0	1.15e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0534197_40	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_42	phrog_544	156.1	0	major head protein	head and packaging
UniRef90	UHGV-0534197_42	UniRef90_R0BKA1	454.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0534197_42	476272.RUMHYD_01776	339.0	0	N/A	N/A
structural_annotation	UHGV-0534197_42	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_43	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_45	phrog_5	47.8	0.00000000000037	tail completion or Neck1 protein	connector
UniRef90	UHGV-0534197_45	UniRef90_A0A6N7TNP6	298.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0534197_45	1123309.AQYB01000018_gene814	95.9	2.49e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0534197_45	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0534197_45	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_47	phrog_8680	201.0	0	N/A	unknown function
UniRef90	UHGV-0534197_47	UniRef90_A0A844D688	454.0	0	N/A	N/A
eggNOG-mapper	UHGV-0534197_47	1423790.BN53_04265	181.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
Pfam	UHGV-0534197_47	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0534197_47	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0534197_47	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_49	phrog_2468	77.9	8.6e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0534197_49	UniRef90_A0A6N7TLR7	611.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0534197_49	1504822.CCNO01000013_gene286	110.0	6.02e-24	cell adhesion	N/A
Pfam	UHGV-0534197_49	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0534197_49	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_49	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_50	phrog_64	115.4	2e-34	portal protein	head and packaging
UniRef90	UHGV-0534197_50	UniRef90_A0A6N7TNT3	726.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0534197_50	673376.F2VHW1_9CAUD	164.0	9.09443e-43	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0534197_50	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0534197_50	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0534197_51	K06909	145.5	4.49817e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0534197_51	phrog_10250	182.4	0	N/A	unknown function
UniRef90	UHGV-0534197_51	UniRef90_A0A844D8I4	795.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0534197_51	903814.ELI_3215	493.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0534197_51	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0534197_51	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0534197_51	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0534197_51	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_52	phrog_606	91.9	6.5e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0534197_52	UniRef90_UPI001C02EFD1	327.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0534197_52	397290.C810_05185	139.0	1.49e-39	DNA-packaging protein gp3	N/A
Pfam	UHGV-0534197_52	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0534197_52	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_54	phrog_36	55.5	0.0000000000000011	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0534197_54	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0534197_56	K01160	63.2	7.8e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0534197_56	phrog_34	62.4	8.7e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0534197_56	UniRef90_A0A6N7TND6	220.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0534197_56	875454.BAEW01000002_gene491	134.0	4.39e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0534197_56	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0534197_56	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0534197_56	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_59	PF11998,COG5420	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_60	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_61	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0534197_62	K02086	68.2	1.2e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-0534197_62	phrog_186	76.8	3.3e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0534197_62	UniRef90_A0A6N7TLH4	264.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0534197_62	877411.JMMA01000002_gene2292	69.3	0.0000000000489	N/A	N/A
Pfam	UHGV-0534197_62	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0534197_62	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0534197_62	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0534197_62	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0534197_63	K03111	142.8	3.59994e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0534197_63	phrog_44	143.3	1.3999e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0534197_63	UniRef90_D4K451	271.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0534197_63	718252.FP2_06770	271.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0534197_63	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0534197_63	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0534197_63	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0534197_63	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0534197_63	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_64	phrog_561	110.8	1e-32	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0534197_64	UniRef90_UPI0011C8A287	147.0	6.20999e-41	recombinase RecT	N/A
eggNOG-mapper	UHGV-0534197_64	33035.JPJF01000071_gene4462	146.0	6.21994e-41	N/A	N/A
structural_annotation	UHGV-0534197_64	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_66	PF06718	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0534197_70	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0534197_71	phrog_27197	84.6	6.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0534197_71	394503.Ccel_3068	53.1	0.000000788	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0534197_71	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0534197_71	NF007410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0534197	Yes	42,477	55	100	1