vOTU vOTU-053328

vOTU: vOTU-053328

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-053328
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00474 → vGENUS-18556 → vSUBGEN-35259 → vOTU-053328
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02
Host range breadth	Genus
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0586648
Biosample ID	N/A
Genome length (bp)	42,591 bps
CheckV completeness	100.00% (Complete)
CDS count	65
CDS density	91.75%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02	Total connections	9	Host agreement	88.89
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0586648_1	phrog_14105	48.5	0.000000000000092	N/A	unknown function
eggNOG-mapper	UHGV-0586648_1	742740.HMPREF9474_02379	55.5	0.000000761	dextransucrase activity	N/A
COG	UHGV-0586648_1	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-0586648_2	phrog_16304	69.5	6.4e-20	N/A	unknown function
UniRef90	UHGV-0586648_2	UniRef90_UPI001E560709	90.9	1.34e-18	N/A	N/A
eggNOG-mapper	UHGV-0586648_2	1226322.HMPREF1545_00016	53.5	0.00000875	HNH endonuclease	N/A
Pfam	UHGV-0586648_2	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0586648_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0586648_2	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_3	K03111	121.3	1.3e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0586648_3	phrog_44	122.4	3.7e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0586648_3	UniRef90_R6IDK3	139.0	9.05001e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0586648_3	1235797.C816_01960	129.0	2.01e-36	Single-strand binding protein family	N/A
Pfam	UHGV-0586648_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0586648_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0586648_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0586648_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0586648_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_4	phrog_7566	92.5	2.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0586648_4	508419.F8J187_9CAUD	108.0	9.75e-30	N/A	N/A
PHROG	UHGV-0586648_5	phrog_72	55.9	6.3e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0586648_5	UniRef90_A0A8D9PDS2	138.0	2.19e-38	NinB protein	N/A
eggNOG-mapper	UHGV-0586648_5	445972.ANACOL_01825	124.0	9.08e-34	N/A	N/A
structural_annotation	UHGV-0586648_5	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_6	phrog_7838	128.3	6.5e-38	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0586648_6	UniRef90_A0A8D9UGW3	196.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0586648_6	742767.HMPREF9456_02052	157.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0586648_6	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_7	phrog_253	105.9	3.7e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0586648_7	UniRef90_A0A1C5N4H2	115.0	1.29e-29	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0586648_7	1410670.JHXF01000015_gene2268	97.8	1.05e-23	Siphovirus Gp157	N/A
Pfam	UHGV-0586648_7	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0586648_7	PF05565	N/A	N/A	N/A	N/A
Pfam	UHGV-0586648_8	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0586648_8	PF12728	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_9	K22300	56.2	7.6e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0586648_9	phrog_8	43.2	0.0000000000087	transcriptional regulator	transcription regulation
UniRef90	UHGV-0586648_9	UniRef90_A0A810PZI0	73.6	5.28e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0586648_9	693746.OBV_25500	62.8	0.00000000000172	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0586648_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0586648_9	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0586648_9	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_12	K22300	42.4	0.000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0586648_12	phrog_8	47.1	0.00000000000047	transcriptional regulator	transcription regulation
UniRef90	UHGV-0586648_12	UniRef90_UPI001896E330	79.7	1.63e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0586648_12	663278.Ethha_2377	65.1	0.0000000000157	sequence-specific DNA binding	N/A
Pfam	UHGV-0586648_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0586648_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0586648_17	UniRef90_A0A8D9UHA6	72.8	0.00000000000153	Helix-turn-helix XRE-family like protein	N/A
eggNOG-mapper	UHGV-0586648_17	1382304.JNIL01000001_gene3508	50.1	0.00000758	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0586648_17	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0586648_17	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_19	K14059	212.2	0	int; integrase	N/A
PHROG	UHGV-0586648_19	phrog_1	213.6	0	integrase	integration and excision
UniRef90	UHGV-0586648_19	UniRef90_UPI0008345DF0	231.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0586648_19	1203606.HMPREF1526_00215	189.0	0	Phage integrase family	N/A
Pfam	UHGV-0586648_19	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0586648_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0586648_19	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0586648_19	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0586648_20	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_21	phrog_20016	193.3	0	N/A	unknown function
UniRef90	UHGV-0586648_21	UniRef90_A0A285PT46	206.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0586648_21	1226322.HMPREF1545_00077	168.0	0	N/A	N/A
structural_annotation	UHGV-0586648_21	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_23	phrog_16490	150.4	1.54143e-44	N/A	unknown function
eggNOG-mapper	UHGV-0586648_23	1408437.JNJN01000043_gene803	148.0	2.81002e-41	N/A	N/A
PHROG	UHGV-0586648_24	phrog_22984	75.7	4.9e-22	N/A	unknown function
PHROG	UHGV-0586648_25	phrog_21718	98.3	6.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-0586648_25	397290.C810_05210	92.4	5.7e-22	N/A	N/A
PHROG	UHGV-0586648_26	phrog_3754	104.7	7.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0586648_26	476272.RUMHYD_01764	153.0	0	N/A	N/A
structural_annotation	UHGV-0586648_27	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_28	phrog_10091	108.3	5.4e-32	holin	lysis
UniRef90	UHGV-0586648_28	UniRef90_A0A1Y4RHF4	132.0	1.36e-38	Phage holin	N/A
eggNOG-mapper	UHGV-0586648_28	97139.C824_05950	114.0	2.21e-32	Bacteriophage holin	N/A
Pfam	UHGV-0586648_28	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0586648_28	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0586648_28	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0586648_28	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_29	phrog_1863	66.0	3.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0586648_29	748224.HMPREF9436_01412	91.3	2.51e-23	N/A	N/A
KOfam	UHGV-0586648_30	K01447	62.5	9.1e-18	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0586648_30	phrog_7698	172.2	0	endolysin	lysis
UniRef90	UHGV-0586648_30	UniRef90_R6CYN5	264.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0586648_30	1203606.HMPREF1526_01931	253.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0586648_30	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0586648_30	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0586648_30	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_31	phrog_774	69.6	5.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0586648_31	397290.C810_05225	62.8	0.00000000000589	N/A	N/A
PHROG	UHGV-0586648_32	phrog_2712	42.7	0.000000000003	tail fiber protein	tail
COG	UHGV-0586648_32	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-0586648_33	411471.SUBVAR_06929	276.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-0586648_33	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0586648_35	phrog_15594	85.4	4.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0586648_35	1118055.CAGU01000013_gene763	58.2	0.000000001	N/A	N/A
structural_annotation	UHGV-0586648_35	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_37	phrog_22978	120.0	2e-38	N/A	unknown function
UniRef90	UHGV-0586648_37	UniRef90_A0A8D9UHE1	392.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0586648_37	693746.OBV_01590	482.0	0	N/A	N/A
Pfam	UHGV-0586648_37	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
eggNOG-mapper	UHGV-0586648_38	1410650.JHWL01000003_gene2815	103.0	1.3e-21	N/A	N/A
Pfam	UHGV-0586648_39	PF09458	N/A	N/A	H-type lectin domain	H_lectin
PHROG	UHGV-0586648_40	phrog_511	212.8	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0586648_40	1410650.JHWL01000003_gene2827	270.0	0	N/A	N/A
structural_annotation	UHGV-0586648_40	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_41	phrog_12105	93.7	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0586648_41	1519439.JPJG01000060_gene1891	64.7	0.0000000000119	N/A	N/A
PHROG	UHGV-0586648_43	phrog_1357	199.0	0	major head protein	head and packaging
UniRef90	UHGV-0586648_43	UniRef90_A0A2V2CFL5	533.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0586648_43	1410650.JHWL01000003_gene2830	262.0	0	N/A	N/A
NCBIFam	UHGV-0586648_43	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0586648_43	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_44	phrog_13908	164.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0586648_44	1410650.JHWL01000003_gene2831	82.8	0.00000000000000419	N/A	N/A
KOfam	UHGV-0586648_45	K07584	63.3	4.8e-18	N/A	N/A
PHROG	UHGV-0586648_45	phrog_4478	75.3	5.8e-22	peptidase	other
UniRef90	UHGV-0586648_45	UniRef90_A0A396QPR2	55.1	0.0000000894	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0586648_45	748224.HMPREF9436_01398	51.6	0.00000367	Cysteine protease Prp	N/A
Pfam	UHGV-0586648_45	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0586648_45	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0586648_45	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_46	phrog_156	279.6	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0586648_46	1410650.JHWL01000003_gene2833	497.0	0	N/A	N/A
structural_annotation	UHGV-0586648_46	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_47	K06909	147.6	9.3887e-44	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0586648_47	phrog_979	147.7	2.8026e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0586648_47	UniRef90_A0A3C0NMI6	619.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0586648_47	1410650.JHWL01000003_gene2834	549.0	0	N/A	N/A
Pfam	UHGV-0586648_47	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0586648_47	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0586648_47	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_50	phrog_4973	72.6	4.3e-21	N/A	unknown function
UniRef90	UHGV-0586648_50	UniRef90_UPI001D0904CC	81.6	7.77e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0586648_50	935261.JAGL01000009_gene1175	49.7	0.000000434	Helix-turn-helix domain	N/A
Pfam	UHGV-0586648_50	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0586648_50	PF14090,MF_01586,TIGR00373,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_51	phrog_18716	139.6	7.70014e-42	N/A	unknown function
UniRef90	UHGV-0586648_51	UniRef90_A0A1J0GJP7	140.0	5.02996e-41	N/A	N/A
eggNOG-mapper	UHGV-0586648_51	665959.HMPREF1013_00856	111.0	2.93e-30	N/A	N/A
Pfam	UHGV-0586648_51	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0586648_51	PF18909	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_55	K22299	48.8	0.00000000000015	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0586648_55	phrog_5823	46.0	0.00000000000072	transcriptional regulator	transcription regulation
UniRef90	UHGV-0586648_55	UniRef90_A0A6B2DCZ3	49.7	0.00000257	Helix-turn-helix transcriptional regulator (Fragment)	N/A
eggNOG-mapper	UHGV-0586648_55	1246626.BleG1_2852	52.0	0.000000238	Transcriptional	N/A
Pfam	UHGV-0586648_55	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0586648_55	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0586648_55	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0586648_57	PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-0586648_62	phrog_60	43.5	0.0000000000047	N/A	unknown function
UniRef90	UHGV-0586648_62	UniRef90_A0A845MZZ9	78.2	2.49e-16	N/A	N/A
eggNOG-mapper	UHGV-0586648_62	406818.XBJ1_1178	52.8	0.0000001	N/A	N/A
Pfam	UHGV-0586648_62	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0586648_63	phrog_757	148.5	2.8026e-44	DNA methyltransferase	other
UniRef90	UHGV-0586648_63	UniRef90_UPI001C00B13F	239.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0586648_63	748224.HMPREF9436_03069	224.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0586648_63	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0586648_63	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0586648_64	K01449	59.8	5e-17	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0586648_64	phrog_30550	149.6	1.12104e-44	N/A	unknown function
UniRef90	UHGV-0586648_64	UniRef90_A0A6N9PX25	125.0	7.33e-33	Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0586648_64	1519439.JPJG01000077_gene920	107.0	1.43e-27	Cell Wall Hydrolase	N/A
Pfam	UHGV-0586648_64	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-0586648_64	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0586648	Yes	42,591	50	100	1