vOTU vOTU-053516

vOTU: vOTU-053516

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-053516
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01285 → vGENUS-01868 → vSUBGEN-34757 → vOTU-053516
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0799834
Biosample ID	N/A
Genome length (bp)	46,663 bps
CheckV completeness	100.00% (Complete)
CDS count	75
CDS density	88.07%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	34	Host agreement	94.12
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0799834_1	phrog_1535	161.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0799834_1	1121866.AUGK01000003_gene1437	242.0	0	phage tail tape measure protein	N/A
COG	UHGV-0799834_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0799834_2	phrog_1194	55.7	7.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0799834_2	445972.ANACOL_01864	53.9	0.000000169	N/A	N/A
structural_annotation	UHGV-0799834_2	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_3	phrog_18190	110.7	4.7e-35	N/A	unknown function
UniRef90	UHGV-0799834_3	UniRef90_A0A416L7Z5	81.3	0.00000000000149	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0799834_3	411471.SUBVAR_06932	236.0	0	N/A	N/A
structural_annotation	UHGV-0799834_3	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_4	phrog_372	204.1	0	tail protein	tail
UniRef90	UHGV-0799834_4	UniRef90_UPI001373A0FD	162.0	2.15e-39	N/A	N/A
eggNOG-mapper	UHGV-0799834_4	1235802.C823_05263	149.0	1.92e-35	N/A	N/A
Pfam	UHGV-0799834_4	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0799834_4	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0799834_4	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_5	K07273	212.8	0	acm; lysozyme	N/A
PHROG	UHGV-0799834_5	phrog_291	152.1	4.2039e-45	endolysin	lysis
UniRef90	UHGV-0799834_5	UniRef90_A0A3D1HW72	270.0	0	1,4-beta-N-acetylmuramidase	N/A
eggNOG-mapper	UHGV-0799834_5	1232453.BAIF02000060_gene1728	231.0	0	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-0799834_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0799834_5	PF01476	N/A	N/A	LysM domain	LysM
Pfam	UHGV-0799834_5	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0799834_5	COG0737	N/A	N/A	2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family	N/A
structural_annotation	UHGV-0799834_5	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0799834_8	PF16967	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_10	phrog_25468	91.8	0	N/A	unknown function
Pfam	UHGV-0799834_10	PF05658	N/A	N/A	YadA head domain repeat (2 copies)	YadA_head
PHROG	UHGV-0799834_12	phrog_4105	96.8	1.3e-28	N/A	unknown function
UniRef90	UHGV-0799834_12	UniRef90_A0A8D9UHA9	132.0	3.69e-38	Holin protein	N/A
eggNOG-mapper	UHGV-0799834_12	742733.HMPREF9469_05011	134.0	1.24e-39	N/A	N/A
PHROG	UHGV-0799834_13	phrog_881	88.8	3e-26	holin	lysis
UniRef90	UHGV-0799834_13	UniRef90_A0A4Q7P349	110.0	2.74e-30	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-0799834_13	742740.HMPREF9474_02251	109.0	1.01e-30	Putative phage holin Dp-1	N/A
Pfam	UHGV-0799834_13	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0799834_13	PF16938	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0799834_14	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_16	phrog_22984	41.2	0.000000000029	N/A	unknown function
PHROG	UHGV-0799834_17	phrog_16490	60.3	4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0799834_17	476272.RUMHYD_01770	69.7	0.00000000000611	N/A	N/A
structural_annotation	UHGV-0799834_18	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0799834_20	1235798.C817_04600	59.3	0.000000000843	N/A	N/A
structural_annotation	UHGV-0799834_20	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_22	K06400	389.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0799834_22	phrog_95	376.3	0	integrase	integration and excision
UniRef90	UHGV-0799834_22	UniRef90_UPI00164E9A6A	479.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0799834_22	718252.FP2_29980	338.0	0	N/A	N/A
Pfam	UHGV-0799834_22	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0799834_22	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0799834_22	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0799834_22	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0799834_22	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0799834_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0799834_23	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_26	K22300	62.1	1.3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0799834_26	phrog_2967	42.1	0.000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0799834_26	UniRef90_A0A810Q5N3	103.0	3.88e-26	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0799834_26	411471.SUBVAR_05818	87.4	1.61e-20	sequence-specific DNA binding	N/A
Pfam	UHGV-0799834_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0799834_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0799834_26	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_31	K07699	108.5	6.3e-32	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-0799834_31	phrog_37855	74.3	1.2e-21	N/A	unknown function
UniRef90	UHGV-0799834_31	UniRef90_UPI0017495239	104.0	1.4e-24	sporulation transcription factor Spo0A	N/A
eggNOG-mapper	UHGV-0799834_31	411483.FAEPRAA2165_01614	94.7	1.1e-21	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-0799834_31	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0799834_31	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
PHROG	UHGV-0799834_35	phrog_434	324.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0799834_35	UniRef90_A0A3D3XZF3	288.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0799834_35	428125.CLOLEP_01823	273.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0799834_35	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0799834_35	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0799834_35	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0799834_35	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_36	K07455	293.6	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0799834_36	phrog_148	272.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0799834_36	UniRef90_U2SBP2	379.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-0799834_36	1226322.HMPREF1545_00015	379.0	0	RecT family	N/A
Pfam	UHGV-0799834_36	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0799834_36	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0799834_36	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0799834_36	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_37	K03111	122.8	4.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0799834_37	phrog_44	128.3	5.7e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0799834_37	UniRef90_A0A3D1LE19	160.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0799834_37	693746.OBV_19910	153.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0799834_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0799834_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0799834_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0799834_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0799834_37	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_38	K01160	57.6	3.6e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0799834_38	phrog_140	128.1	5.2e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0799834_38	UniRef90_L1Q8K9	135.0	3.1e-38	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0799834_38	545697.HMPREF0216_02819	135.0	5.2e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0799834_38	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0799834_38	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0799834_38	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_39	phrog_16304	80.9	1.6e-23	N/A	unknown function
UniRef90	UHGV-0799834_39	UniRef90_UPI001D074B07	86.7	3.13e-17	N/A	N/A
eggNOG-mapper	UHGV-0799834_39	343509.SG1178	64.7	0.00000000188	N/A	N/A
Pfam	UHGV-0799834_39	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0799834_39	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_40	phrog_9804	123.9	1.1e-36	N/A	unknown function
UniRef90	UHGV-0799834_40	UniRef90_A0A174S716	186.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0799834_40	585394.RHOM_14005	114.0	3.49e-29	Loader and inhibitor of phage G40P	N/A
structural_annotation	UHGV-0799834_40	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_42	phrog_757	84.4	1.2e-24	DNA methyltransferase	other
UniRef90	UHGV-0799834_42	UniRef90_A0A355YQL4	134.0	5.89e-37	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0799834_42	748224.HMPREF9436_03069	149.0	1.20512e-43	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0799834_42	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0799834_44	K00390	81.6	1.2e-24	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0799834_44	phrog_424	91.3	8.3e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0799834_44	UniRef90_A0A3R6M557	617.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0799834_44	1235800.C819_02256	583.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0799834_44	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0799834_44	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0799834_44	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0799834_47	K21919	62.2	4.9e-18	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0799834_47	phrog_923	66.0	2.7e-19	N/A	unknown function
UniRef90	UHGV-0799834_47	UniRef90_A0A1C5L7S0	94.0	1.03e-19	Type III effector pipB2	N/A
eggNOG-mapper	UHGV-0799834_47	1151292.QEW_3618	102.0	1.27e-23	Pentapeptide repeat protein	N/A
Pfam	UHGV-0799834_47	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0799834_47	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0799834_47	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0799834_47	PF19062,PF13599,NF000139	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_50	phrog_15198	46.3	0.00000000000074	N/A	unknown function
UniRef90	UHGV-0799834_50	UniRef90_A0A3A6ECV8	107.0	5.09e-28	N/A	N/A
eggNOG-mapper	UHGV-0799834_50	411470.RUMGNA_00214	78.6	2.37e-16	N/A	N/A
Pfam	UHGV-0799834_50	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0799834_50	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0799834_54	PF21166	N/A	N/A	N/A	N/A
UniRef90	UHGV-0799834_56	UniRef90_UPI001D07B715	133.0	4.87e-36	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0799834_56	1235793.C809_00539	57.8	0.0000000838	N/A	N/A
Pfam	UHGV-0799834_56	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
eggNOG-mapper	UHGV-0799834_58	1232436.CAPF01000086_gene855	55.1	0.00000123	N/A	N/A
structural_annotation	UHGV-0799834_60	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0799834_61	485916.Dtox_2202	60.1	0.00000000467	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0799834_61	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0799834_61	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_62	phrog_38	200.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0799834_62	UniRef90_A0A810QA10	652.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0799834_62	1298920.KI911353_gene2682	474.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0799834_62	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0799834_62	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0799834_62	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_63	phrog_64	210.7	0	portal protein	head and packaging
UniRef90	UHGV-0799834_63	UniRef90_UPI001C02F349	654.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0799834_63	1121866.AUGK01000003_gene1429	383.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0799834_63	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0799834_63	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_66	phrog_1328	123.0	1.9e-36	major head protein	head and packaging
UniRef90	UHGV-0799834_66	UniRef90_UPI00164DD2D5	558.0	0	N/A	N/A
eggNOG-mapper	UHGV-0799834_66	665956.HMPREF1032_03619	233.0	0	N/A	N/A
Pfam	UHGV-0799834_66	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-0799834_66	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0799834_67	UniRef90_UPI00164E20D5	139.0	1.17e-40	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0799834_67	1298920.KI911353_gene2658	52.4	0.00000025	N/A	N/A
structural_annotation	UHGV-0799834_67	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0799834_69	1121866.AUGK01000003_gene1432	75.5	0.00000000000000106	N/A	N/A
eggNOG-mapper	UHGV-0799834_70	1298920.KI911353_gene2654	76.6	0.00000000000000306	N/A	N/A
structural_annotation	UHGV-0799834_71	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0799834_72	phrog_158	47.9	0.00000000000022	major tail protein	tail
UniRef90	UHGV-0799834_72	UniRef90_A0A1C6L0H9	201.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0799834_72	1232453.BAIF02000058_gene1634	86.3	8.68e-20	N/A	N/A
structural_annotation	UHGV-0799834_72	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0799834_73	UniRef90_A0A847W2H3	95.1	3.8e-23	N/A	N/A
eggNOG-mapper	UHGV-0799834_73	1123263.AUKY01000015_gene1618	91.3	1.98e-22	N/A	N/A
Pfam	UHGV-0799834_73	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0799834_73	PF16478	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0799834	Yes	46,663	54	100	1