vOTU vOTU-054349

vOTU: vOTU-054349

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054349
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00177 → vSUBGEN-03072 → vOTU-054349
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1352721
Biosample ID	N/A
Genome length (bp)	42,424 bps
CheckV completeness	100.00% (Complete)
CDS count	77
CDS density	92.66%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	818	Host agreement	90.1
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1352721_1	phrog_19111	41.5	1.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-1352721_1	411471.SUBVAR_06929	281.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1352721_1	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1352721_2	phrog_37900	322.1	0	N/A	unknown function
UniRef90	UHGV-1352721_2	UniRef90_UPI001C3EA4DF	347.0	0	N/A	N/A
eggNOG-mapper	UHGV-1352721_2	552398.HMPREF0866_03098	252.0	0	N/A	N/A
Pfam	UHGV-1352721_2	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1352721_2	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1352721_2	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_3	phrog_29409	44.6	0.0000000000017	N/A	unknown function
structural_annotation	UHGV-1352721_5	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_6	phrog_115	118.5	5.3e-35	minor head protein	head and packaging
UniRef90	UHGV-1352721_6	UniRef90_A0A810PSD3	445.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1352721_6	1504822.CCNO01000013_gene286	217.0	0	cell adhesion	N/A
Pfam	UHGV-1352721_6	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1352721_6	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1352721_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_6	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_7	phrog_5	82.1	9.2e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-1352721_7	UniRef90_UPI0018AA0B5A	187.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1352721_7	1123309.AQYB01000018_gene814	94.7	3.84e-23	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1352721_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1352721_7	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1352721_7	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_8	phrog_194	43.7	0.0000000000047	head scaffolding protein	head and packaging
UniRef90	UHGV-1352721_8	UniRef90_A0A6B9SU02	149.0	3.96988e-42	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1352721_8	476272.RUMHYD_01775	58.5	0.0000000659	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1352721_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_9	phrog_544	130.0	2.2e-38	major head protein	head and packaging
UniRef90	UHGV-1352721_9	UniRef90_A0A1C6B5R0	593.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1352721_9	1232453.BAIF02000011_gene3359	363.0	0	N/A	N/A
Pfam	UHGV-1352721_9	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1352721_9	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_11	phrog_17977	80.4	1.5e-23	N/A	unknown function
UniRef90	UHGV-1352721_11	UniRef90_UPI00141211AB	115.0	7.02e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1352721_11	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_12	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_13	phrog_885	74.5	1.2e-21	major tail protein	tail
UniRef90	UHGV-1352721_13	UniRef90_A0A843J9F0	209.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1352721_13	1504822.CCNO01000012_gene492	246.0	0	N/A	N/A
structural_annotation	UHGV-1352721_13	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_14	phrog_18646	62.1	9.3e-18	N/A	unknown function
UniRef90	UHGV-1352721_14	UniRef90_B6CXF0	71.6	0.000000000000105	Peptidase-colicin	N/A
PHROG	UHGV-1352721_16	phrog_6900	269.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1352721_16	1123312.KB904569_gene357	323.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1352721_16	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1352721_16	MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_17	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_18	phrog_13879	174.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1352721_18	1122919.KB905559_gene1344	162.0	5.35002e-41	N/A	N/A
structural_annotation	UHGV-1352721_18	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_19	phrog_18725	94.8	8.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-1352721_19	693746.OBV_18220	131.0	8.87e-37	N/A	N/A
structural_annotation	UHGV-1352721_20	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1352721_21	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1352721_21	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_25	phrog_13256	67.2	1.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-1352721_25	1226322.HMPREF1545_00132	73.6	2.37e-16	N/A	N/A
PHROG	UHGV-1352721_26	phrog_14030	146.2	2.00386e-43	N/A	unknown function
UniRef90	UHGV-1352721_26	UniRef90_R6LL81	246.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1352721_26	1121866.AUGK01000003_gene1444	92.8	6.95e-19	amidase activity	N/A
COG	UHGV-1352721_26	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1352721_27	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1352721_29	760568.Desku_0885	58.9	0.0000000361	N/A	N/A
structural_annotation	UHGV-1352721_29	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_30	phrog_25567	41.4	0.000000000018	N/A	unknown function
UniRef90	UHGV-1352721_30	UniRef90_UPI00164AED9E	92.0	6.74e-22	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1352721_30	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1352721_30	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_31	phrog_3754	86.0	4.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1352721_31	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-1352721_32	phrog_21718	102.2	4.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1352721_32	397290.C810_05210	69.3	0.00000000000135	N/A	N/A
PHROG	UHGV-1352721_33	phrog_22984	76.0	7.2e-23	N/A	unknown function
PHROG	UHGV-1352721_34	phrog_16490	122.7	5.5e-37	N/A	unknown function
eggNOG-mapper	UHGV-1352721_34	1408437.JNJN01000043_gene803	130.0	2.92e-34	N/A	N/A
PHROG	UHGV-1352721_35	phrog_20016	196.4	0	N/A	unknown function
UniRef90	UHGV-1352721_35	UniRef90_A0A285PT46	188.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1352721_35	1226322.HMPREF1545_00077	170.0	0	N/A	N/A
structural_annotation	UHGV-1352721_35	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_36	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1352721_37	1226322.HMPREF1545_00079	106.0	3.23e-28	N/A	N/A
KOfam	UHGV-1352721_38	K14059	130.6	1.9e-38	int; integrase	N/A
PHROG	UHGV-1352721_38	phrog_1	143.4	1.80067e-42	integrase	integration and excision
UniRef90	UHGV-1352721_38	UniRef90_UPI00195CC1EE	379.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1352721_38	1235835.C814_03141	196.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1352721_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1352721_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1352721_38	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-1352721_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1352721_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1352721_39	PF12844	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_43	PF13601,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-1352721_44	UniRef90_A0A3D3Y0G5	114.0	1.02e-29	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1352721_44	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1352721_45	1216932.CM240_0696	73.6	0.000000000000439	N/A	N/A
structural_annotation	UHGV-1352721_45	PF03965,MF_01819,NF012168,COG3682	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1352721_46	405948.SACE_5483	50.1	0.00000403	domain, Protein	N/A
Pfam	UHGV-1352721_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1352721_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1352721_46	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1352721_47	UniRef90_UPI000F0633F9	63.5	0.00000000000653	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1352721_47	1235835.C814_03153	76.3	1.23e-17	N/A	N/A
structural_annotation	UHGV-1352721_47	PF09035,NF040990	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1352721_48	760568.Desku_0919	113.0	1.47e-28	N/A	N/A
structural_annotation	UHGV-1352721_48	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_51	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_52	phrog_27197	60.1	2.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1352721_52	445970.ALIPUT_01221	87.4	2.93e-17	DNA-templated transcription, initiation	N/A
COG	UHGV-1352721_52	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-1352721_54	phrog_155	152.3	2.8026e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352721_54	UniRef90_UPI00130EB09C	201.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1352721_54	748224.HMPREF9436_03360	180.0	0	ERF superfamily	N/A
Pfam	UHGV-1352721_54	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1352721_54	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1352721_55	K03111	141.7	7.70014e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1352721_55	phrog_44	144.2	7.49695e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1352721_55	UniRef90_R6LVK0	197.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1352721_55	1007096.BAGW01000023_gene151	185.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1352721_55	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1352721_55	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1352721_55	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1352721_55	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1352721_55	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_57	phrog_16304	56.7	3.3e-16	N/A	unknown function
UniRef90	UHGV-1352721_57	UniRef90_A0A3D3Y5P0	220.0	0	N/A	N/A
Pfam	UHGV-1352721_57	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1352721_57	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1352721_59	K00558	160.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1352721_59	phrog_363	243.1	0	DNA methyltransferase	other
UniRef90	UHGV-1352721_59	UniRef90_G4KRB8	334.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1352721_59	693746.OBV_01900	334.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1352721_59	MTase_II_00058	118.6	4.5e-35	Type II methyltransferase	RM
Pfam	UHGV-1352721_59	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1352721_59	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1352721_59	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1352721_59	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_60	phrog_3136	141.6	2.20004e-42	N/A	unknown function
UniRef90	UHGV-1352721_60	UniRef90_UPI001C26B029	157.0	7.00649e-45	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1352721_60	1235793.C809_02645	63.5	0.00000000166	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1352721_60	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1352721_60	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1352721_60	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_62	phrog_38832	51.8	0.0000000000000071	N/A	unknown function
eggNOG-mapper	UHGV-1352721_62	665956.HMPREF1032_00143	60.8	0.00000000507	N/A	N/A
structural_annotation	UHGV-1352721_62	PF18300,MF_01549,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_68	phrog_1770	55.7	9.5e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1352721_68	536233.CLO_1822	159.0	0	N/A	N/A
structural_annotation	UHGV-1352721_68	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1352721_70	742738.HMPREF9460_02503	87.0	4.53e-21	N/A	N/A
structural_annotation	UHGV-1352721_70	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1352721_71	K07319	120.1	2.1e-35	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1352721_71	phrog_498	428.2	0	DNA methyltransferase	other
UniRef90	UHGV-1352721_71	UniRef90_UPI001782D995	430.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-1352721_71	1423758.BN55_01455	422.0	0	DNA methylase	N/A
PADLOC	UHGV-1352721_71	MTase_II_00015	220.6	0	Type II methyltransferase	RM
Pfam	UHGV-1352721_71	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1352721_71	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1352721_71	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1352721_71	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1352721_73	K06909	101.8	7.5e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1352721_73	phrog_10250	116.9	1.5e-34	N/A	unknown function
UniRef90	UHGV-1352721_73	UniRef90_A0A1I3QR69	464.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-1352721_73	748224.HMPREF9436_03341	338.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1352721_73	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1352721_73	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1352721_73	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1352721_73	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1352721_73	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1352721_74	phrog_64	156.1	0	portal protein	head and packaging
UniRef90	UHGV-1352721_74	UniRef90_UPI001AA0B7FF	499.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1352721_74	673376.F2VHW1_9CAUD	221.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1352721_74	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1352721_74	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352721_75	PF10651,NF038186	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1352721	Yes	42,424	54	100	1
UHGV-0204788	No	43,275	53	100	1
UHGV-1943604	No	42,717	54	100	1
UHGV-2218222	No	34,561	53	83	1
UHGV-1506322	No	21,344	54	52	1
UHGV-0091113	No	17,936	55	43	1
UHGV-2108203	No	13,200	54	32	1