vOTU vOTU-054372

vOTU: vOTU-054372

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054372
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-22136 → vOTU-054372
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1353028
Biosample ID	SAMEA3664520
Genome length (bp)	42,129 bps
CheckV completeness	100.00% (Complete)
CDS count	67
CDS density	90.91%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	416	Host agreement	99.52
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1353028_1	1408437.JNJN01000043_gene801	95.1	1.74e-21	N/A	N/A
eggNOG-mapper	UHGV-1353028_2	1408437.JNJN01000043_gene802	122.0	3.18e-34	N/A	N/A
PHROG	UHGV-1353028_3	phrog_16490	104.2	2.69999e-40	N/A	unknown function
eggNOG-mapper	UHGV-1353028_3	1408437.JNJN01000043_gene803	161.0	1.4013e-45	N/A	N/A
PHROG	UHGV-1353028_6	phrog_5765	60.1	2.7e-17	N/A	unknown function
UniRef90	UHGV-1353028_6	UniRef90_A0A6L8XUI5	52.4	0.0000000478	BC1881 family protein	N/A
eggNOG-mapper	UHGV-1353028_6	1095750.HMPREF9970_1008	53.9	0.00000000201	N/A	N/A
NCBIFam	UHGV-1353028_6	NF033495.1	N/A	N/A	BC1881 family protein	N/A
PHROG	UHGV-1353028_8	phrog_15303	83.8	1.6e-24	N/A	unknown function
KOfam	UHGV-1353028_10	K07273	169.8	0	acm; lysozyme	N/A
PHROG	UHGV-1353028_10	phrog_291	133.7	1.8e-39	endolysin	lysis
UniRef90	UHGV-1353028_10	UniRef90_UPI001D0EE7D8	301.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1353028_10	748224.HMPREF9436_00154	276.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1353028_10	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1353028_10	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1353028_10	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_13	phrog_1067	172.6	0	minor head protein	head and packaging
UniRef90	UHGV-1353028_13	UniRef90_A0A2A7AM44	706.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_13	1123263.AUKY01000068_gene489	195.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1353028_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1353028_13	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1353028_13	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1353028_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_14	phrog_33	71.3	2.4e-20	distal tail protein Dit	tail
UniRef90	UHGV-1353028_14	UniRef90_UPI00084D54FA	103.0	1.72e-23	phage tail family protein	N/A
eggNOG-mapper	UHGV-1353028_14	908340.HMPREF9406_2569	91.3	1.81e-19	phage tail	N/A
NCBIFam	UHGV-1353028_14	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1353028_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1353028_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_15	phrog_9959	99.1	2.8e-29	tail length tape measure protein	tail
UniRef90	UHGV-1353028_15	UniRef90_A0A2A7ALS3	699.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_15	596328.HMPREF0578_1241	193.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1353028_15	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1353028_15	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1353028_15	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1353028_15	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_18	phrog_88	96.3	3.2e-28	major tail protein	tail
UniRef90	UHGV-1353028_18	UniRef90_G9YSC5	110.0	8.09e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1353028_18	33035.JPJF01000039_gene278	70.9	0.00000000000203	N/A	N/A
NCBIFam	UHGV-1353028_18	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1353028_18	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_19	phrog_5	46.6	0.00000000000027	tail completion or Neck1 protein	connector
UniRef90	UHGV-1353028_19	UniRef90_A0A1C6FG30	111.0	4.69e-28	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1353028_19	33035.JPJF01000039_gene277	108.0	1.77e-27	N/A	N/A
structural_annotation	UHGV-1353028_19	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353028_20	999413.HMPREF1094_02005	65.9	0.00000000000161	N/A	N/A
structural_annotation	UHGV-1353028_20	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_21	phrog_19734	94.8	8e-28	N/A	unknown function
UniRef90	UHGV-1353028_21	UniRef90_A0A0D8I708	80.9	5.02e-17	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-1353028_21	349161.Dred_2602	75.5	0.00000000000000104	N/A	N/A
structural_annotation	UHGV-1353028_21	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_22	phrog_749	57.2	2.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-1353028_22	1211817.CCAT010000053_gene2133	62.4	0.0000000000349	N/A	N/A
PHROG	UHGV-1353028_23	phrog_10	130.5	1.1e-38	major head protein	head and packaging
UniRef90	UHGV-1353028_23	UniRef90_A0A2A7B712	722.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1353028_23	1235792.C808_00086	450.0	0	Phage capsid family	N/A
Pfam	UHGV-1353028_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1353028_23	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1353028_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1353028_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1353028_23	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1353028_24	K01358	75.1	1.3e-21	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1353028_24	phrog_94	123.2	3.1e-36	head maturation protease	head and packaging
UniRef90	UHGV-1353028_24	UniRef90_UPI001C0ECD60	130.0	1.7e-33	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1353028_24	1232452.BAIB02000007_gene1626	121.0	5.76e-31	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1353028_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1353028_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1353028_24	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_25	phrog_12	125.7	3.5e-37	portal protein	head and packaging
UniRef90	UHGV-1353028_25	UniRef90_A0A2A7B6S8	554.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1353028_25	349161.Dred_2606	259.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1353028_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1353028_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1353028_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1353028_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_26	phrog_9	239.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1353028_26	UniRef90_A0A2A7ALT4	1053.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1353028_26	610130.Closa_0741	635.0	0	Phage Terminase	N/A
Pfam	UHGV-1353028_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1353028_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1353028_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_27	phrog_13845	55.6	7e-16	N/A	unknown function
eggNOG-mapper	UHGV-1353028_27	1399942.U3PDR2_9CAUD	66.2	0.00000000000381	N/A	N/A
structural_annotation	UHGV-1353028_27	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_28	phrog_119	57.6	1.9e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353028_28	UniRef90_A0A2A7B6I3	234.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_28	610130.Closa_0739	108.0	4.44e-29	HNH nucleases	N/A
Pfam	UHGV-1353028_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1353028_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1353028_29	phrog_21498	303.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1353028_29	78346.BRUM_0376	273.0	0	DNA binding	N/A
COG	UHGV-1353028_29	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1353028_29	PF05869,TIGR01712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353028_35	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-1353028_36	K03497	90.1	4.5e-26	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1353028_36	phrog_4715	113.3	2e-33	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353028_36	UniRef90_A0A2A7B6Q0	361.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_36	411471.SUBVAR_05842	179.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1353028_36	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1353028_36	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1353028_36	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1353028_37	K03496	206.4	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1353028_37	phrog_164	153.6	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353028_37	UniRef90_A0A2A7B6H3	357.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_37	411471.SUBVAR_05839	228.0	0	AAA domain	N/A
Pfam	UHGV-1353028_37	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1353028_37	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1353028_37	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_39	phrog_6969	51.7	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1353028_39	748224.HMPREF9436_00735	157.0	2.25609e-43	N/A	N/A
Pfam	UHGV-1353028_39	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-1353028_39	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-1353028_39	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1353028_39	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-1353028_40	K03111	146.4	2.90069e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1353028_40	phrog_44	147.0	9.94922e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353028_40	UniRef90_A0A2A7ALU9	207.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1353028_40	748224.HMPREF9436_00638	209.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1353028_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1353028_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1353028_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1353028_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1353028_40	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_41	phrog_7566	87.0	1.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1353028_41	411471.SUBVAR_05830	106.0	1.59e-28	N/A	N/A
PHROG	UHGV-1353028_44	phrog_72	47.3	0.00000000000037	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1353028_44	411471.SUBVAR_05829	135.0	6.98e-38	N/A	N/A
structural_annotation	UHGV-1353028_44	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_45	phrog_14970	45.1	0.0000000000019	N/A	unknown function
COG	UHGV-1353028_45	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1353028_45	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353028_48	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
KOfam	UHGV-1353028_53	K14060	112.0	7.8e-33	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1353028_53	phrog_125	151.3	5.60519e-45	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353028_53	UniRef90_A0A0D8IU11	254.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1353028_53	1297617.JPJD01000058_gene1031	250.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1353028_53	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1353028_53	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1353028_53	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353028_57	UniRef90_UPI000BEF0F65	70.9	0.00000000000000636	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-1353028_57	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_58	phrog_8	43.7	0.0000000000069	transcriptional regulator	transcription regulation
UniRef90	UHGV-1353028_58	UniRef90_A0A2A7AM72	167.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_58	1378168.N510_01712	67.8	0.00000000000406	N/A	N/A
Pfam	UHGV-1353028_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1353028_58	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353028_59	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353028_63	2754.EH55_07110	91.7	2.19e-18	N/A	N/A
structural_annotation	UHGV-1353028_63	COG5342	N/A	N/A	N/A	N/A
PHROG	UHGV-1353028_66	phrog_1373	41.0	0.000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1353028_66	UniRef90_A0A2A7AM70	187.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1353028_66	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1353028_66	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1353028_66	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1353028_67	K14059	174.2	0	int; integrase	N/A
PHROG	UHGV-1353028_67	phrog_1	159.5	0	integrase	integration and excision
UniRef90	UHGV-1353028_67	UniRef90_A0A367GI93	226.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1353028_67	1507.HMPREF0262_00307	159.0	9.8231e-43	Phage integrase family	N/A
Pfam	UHGV-1353028_67	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1353028_67	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1353028_67	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1353028	Yes	42,129	53	100	1
UHGV-0140569	No	14,799	54	36	1
UHGV-0193024	No	13,419	55	33	1