vOTU vOTU-054401

vOTU: vOTU-054401

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054401
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-03074 → vGENUS-04191 → vSUBGEN-25442 → vOTU-054401
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1353405
Biosample ID	SAMN07646516
Genome length (bp)	41,568 bps
CheckV completeness	100.00% (Complete)
CDS count	60
CDS density	90.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1353405_2	phrog_21026	46.9	0.00000000000036	N/A	unknown function
KOfam	UHGV-1353405_7	K08309	50.9	0.000000000000032	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-1353405_7	phrog_19349	148.3	3.78351e-44	N/A	unknown function
UniRef90	UHGV-1353405_7	UniRef90_A0A7X8VC09	130.0	1.04e-34	Lytic transglycosylase domain-containing protein	N/A
eggNOG-mapper	UHGV-1353405_7	742740.HMPREF9474_02375	120.0	3.88e-31	lytic transglycosylase activity	N/A
Pfam	UHGV-1353405_7	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1353405_7	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1353405_7	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_10	phrog_7950	42.0	0.000000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-1353405_10	UniRef90_A0A7X7N0U6	59.3	0.000000000196	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1353405_10	562981.HMPREF0428_01419	51.6	0.000000138	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1353405_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1353405_10	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1353405_11	K06919	102.0	5.4e-30	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1353405_11	phrog_1829	564.6	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353405_11	UniRef90_A0A1L8TAY8	459.0	0	Phage/plasmid primase, P4 family domain-containing protein	N/A
eggNOG-mapper	UHGV-1353405_11	1347392.CCEZ01000005_gene1217	458.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1353405_11	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1353405_11	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1353405_11	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1353405_11	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1353405_11	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1353405_11	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_12	phrog_474	113.6	2.8e-33	phosphofructokinase	other
eggNOG-mapper	UHGV-1353405_12	428125.CLOLEP_01367	104.0	7.39e-26	N/A	N/A
Pfam	UHGV-1353405_12	PF19905	N/A	N/A	N/A	DUF6378
eggNOG-mapper	UHGV-1353405_14	1235793.C809_00539	65.5	0.0000000000992	N/A	N/A
PHROG	UHGV-1353405_15	phrog_16683	50.0	0.000000000000029	N/A	unknown function
UniRef90	UHGV-1353405_15	UniRef90_A0A843HM36	82.0	0.000000000000254	Amidoligase family protein	N/A
eggNOG-mapper	UHGV-1353405_15	97138.C820_02226	72.0	0.0000000000824	Putative amidoligase enzyme	N/A
Pfam	UHGV-1353405_15	PF12224	N/A	N/A	Putative amidoligase enzyme	Amidoligase_2
UniRef90	UHGV-1353405_16	UniRef90_A0A101EEH0	89.0	1.46e-17	Glutamine amidotransferase type-2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1353405_16	1401067.HMPREF0872_03875	97.1	1.12e-20	N/A	N/A
structural_annotation	UHGV-1353405_16	PF13230,MF_01931,TIGR01134,COG0121	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_18	phrog_38	151.0	5.60519e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1353405_18	UniRef90_A0A7X2P7N6	240.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1353405_18	1232453.BAIF02000058_gene1623	238.0	0	TIGRFAM Phage	N/A
COG	UHGV-1353405_18	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353405_18	PF05203,PF17289,MF_04147,MF_01420,NF033889,NF007072,COG5362,COG1372	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_19	phrog_64	188.7	0	portal protein	head and packaging
UniRef90	UHGV-1353405_19	UniRef90_A0A3D0LYK0	296.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1353405_19	1121866.AUGK01000003_gene1429	217.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1353405_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1353405_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_20	phrog_172	54.1	0.0000000000000029	head scaffolding protein	head and packaging
Pfam	UHGV-1353405_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1353405_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_21	phrog_247	227.1	0	major head protein	head and packaging
UniRef90	UHGV-1353405_21	UniRef90_A0A3D0LY55	372.0	0	Coat protein	N/A
eggNOG-mapper	UHGV-1353405_21	1304866.K413DRAFT_3038	300.0	0	N/A	N/A
Pfam	UHGV-1353405_21	PF20036	N/A	N/A	Major capsid protein 13-like	Gp13-like
structural_annotation	UHGV-1353405_21	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1353405_22	UniRef90_D7GNV9	51.6	0.00000438	Phage QLRG family, putative DNA packaging	N/A
Pfam	UHGV-1353405_22	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1353405_22	TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353405_23	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1353405_25	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_26	phrog_158	58.5	1.5e-16	major tail protein	tail
eggNOG-mapper	UHGV-1353405_26	469596.HMPREF9488_01310	135.0	1.06e-38	N/A	N/A
structural_annotation	UHGV-1353405_26	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353405_27	1211844.CBLM010000023_gene988	53.1	0.000000167	N/A	N/A
Pfam	UHGV-1353405_27	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1353405_27	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_29	phrog_1535	125.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1353405_29	1121866.AUGK01000003_gene1437	224.0	0	phage tail tape measure protein	N/A
COG	UHGV-1353405_29	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1353405_30	phrog_1194	55.0	0.0000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1353405_30	665956.HMPREF1032_03056	59.3	0.00000000194	N/A	N/A
structural_annotation	UHGV-1353405_30	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_31	phrog_13879	283.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1353405_31	665956.HMPREF1032_03630	178.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1353405_31	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_32	phrog_18725	50.3	0.000000000000026	N/A	unknown function
KOfam	UHGV-1353405_36	K18454	40.5	0.000000000031	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-1353405_36	phrog_18593	82.4	5.4e-24	N/A	unknown function
UniRef90	UHGV-1353405_36	UniRef90_A0A1C5VT90	144.0	6.97006e-42	Chitinase A1	N/A
eggNOG-mapper	UHGV-1353405_36	552398.HMPREF0866_03095	125.0	3.16e-34	N/A	N/A
Pfam	UHGV-1353405_36	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1353405_36	PF14600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1353405_37	411468.CLOSCI_01509	63.5	0.0000000000139	N/A	N/A
PHROG	UHGV-1353405_38	phrog_14030	123.2	1.5e-36	N/A	unknown function
UniRef90	UHGV-1353405_38	UniRef90_E6LJC2	144.0	5.47e-38	Cell wall-binding repeat protein	N/A
eggNOG-mapper	UHGV-1353405_38	887325.HMPREF0381_0057	144.0	9.18e-39	Putative cell wall binding repeat	N/A
Pfam	UHGV-1353405_38	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1353405_38	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
eggNOG-mapper	UHGV-1353405_39	1280681.AUJZ01000045_gene2512	72.0	4.51e-16	N/A	N/A
UniRef90	UHGV-1353405_41	UniRef90_A0A1G9H8X9	81.3	6.2e-18	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1353405_41	1158609.I586_00057	79.0	8.66e-18	Archaeal holliday junction resolvase (hjc)	N/A
COG	UHGV-1353405_41	COG1591	N/A	N/A	Holliday junction resolvase Hjc, archaeal type	N/A
structural_annotation	UHGV-1353405_41	PF08774,NF040854,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_42	phrog_2245	95.2	6.3e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1353405_42	UniRef90_A0A4U9RLZ8	61.2	0.000000000584	N/A	N/A
eggNOG-mapper	UHGV-1353405_42	1226322.HMPREF1545_00289	68.2	0.00000000000248	N/A	N/A
structural_annotation	UHGV-1353405_43	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_45	phrog_434	91.8	7.9e-27	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353405_45	UniRef90_UPI001A9C0D6F	248.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-1353405_45	1219626.HMPREF1639_07320	244.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1353405_45	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-1353405_45	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1353405_45	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_48	phrog_1252	193.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353405_48	UniRef90_A0A6G7WZS2	240.0	0	DNA_pol_B domain-containing protein	N/A
eggNOG-mapper	UHGV-1353405_48	1280692.AUJL01000009_gene2997	148.0	1.87e-35	DNA polymerase elongation subunit (Family B)	N/A
COG	UHGV-1353405_48	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1353405_48	PF04404,PF00476,NF004418,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_49	phrog_374	188.8	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353405_49	UniRef90_Q4ZBR0	199.0	0	ORF019	N/A
eggNOG-mapper	UHGV-1353405_49	320843.Q4ZBR0_9CAUD	199.0	0	sequence-specific DNA binding transcription factor activity	N/A
PHROG	UHGV-1353405_50	phrog_1252	182.3	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353405_50	UniRef90_A3DG77	176.0	0	DNA polymerase B region	N/A
eggNOG-mapper	UHGV-1353405_50	203119.Cthe_1735	176.0	0	DNA polymerase elongation subunit (Family B)	N/A
COG	UHGV-1353405_50	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
structural_annotation	UHGV-1353405_50	NF004420	N/A	N/A	N/A	N/A
KOfam	UHGV-1353405_52	K14440	161.9	0	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1353405_52	phrog_62	290.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1353405_52	UniRef90_A0A6G7WZZ8	390.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1353405_52	1219626.HMPREF1639_07295	323.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-1353405_52	ZorD1_00007	96.0	7.3e-35	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-1353405_52	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1353405_52	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1353405_52	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1353405_52	PF00176,PF00271,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1353405_55	phrog_10714	41.1	0.000000000028	N/A	unknown function
PHROG	UHGV-1353405_57	phrog_419	77.9	1.9e-22	N/A	unknown function
UniRef90	UHGV-1353405_57	UniRef90_A0A1L5L3J8	68.6	0.000000000000053	PGDYG protein (Fragment)	N/A
eggNOG-mapper	UHGV-1353405_57	1298920.KI911353_gene2655	80.9	2.3e-19	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1353405	Yes	41,568	37	100	1
UHGV-0914873	No	41,580	37	96	1
UHGV-0999716	No	41,553	37	96	1
UHGV-1122284	No	39,202	37	90	1
UHGV-1005005	No	30,262	38	70	1
UHGV-1226637	No	20,609	37	47	1
UHGV-1194583	No	16,775	39	39	1
UHGV-0939767	No	11,146	37	26	1