vOTU vOTU-054664

vOTU: vOTU-054664

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054664
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vSUBFAM-00670 → vGENUS-03973 → vSUBGEN-04154 → vOTU-054664
Host lineage	Bacteria → Firmicutes_A
Host range breadth	Phylum
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1356511
Biosample ID	SAMEA2581920
Genome length (bp)	34,191 bps
CheckV completeness	100.00% (Complete)
CDS count	49
CDS density	94.19%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A	Total connections	6	Host agreement	66.67
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → Borkfalkiaceae → Scatosoma → Scatosoma sp900552625	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1356511_1	UniRef90_R7FZN6	52.0	0.0000041	Putative helix-turn-helix protein	N/A
Pfam	UHGV-1356511_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1356511_1	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
KOfam	UHGV-1356511_2	K14059	111.1	1e-32	int; integrase	N/A
PHROG	UHGV-1356511_2	phrog_1	102.2	5.8e-30	integrase	integration and excision
UniRef90	UHGV-1356511_2	UniRef90_A0A2V2GHD8	140.0	1.69e-34	Integrase_SAM-like_N domain-containing protein	N/A
Pfam	UHGV-1356511_2	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
COG	UHGV-1356511_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-1356511_4	phrog_10390	139.6	2.50006e-41	N/A	unknown function
UniRef90	UHGV-1356511_4	UniRef90_A0A853JSJ4	151.0	2.24208e-44	SocA family protein	N/A
eggNOG-mapper	UHGV-1356511_4	1321774.HMPREF9108_00996	138.0	5.59e-40	N/A	N/A
Pfam	UHGV-1356511_4	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-1356511_4	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_4	PF13274,COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_8	PF14564	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_9	PF14530,MF_01441,NF009990,COG0783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1356511_11	476272.RUMHYD_00002	81.3	0.00000000000118	N/A	N/A
structural_annotation	UHGV-1356511_11	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_12	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_16	PF06199,PF05561,MF_01457,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1356511_17	UniRef90_A0A2Z4GU91	82.8	1.4e-18	Minor capsid protein	N/A
structural_annotation	UHGV-1356511_18	PF07405,TIGR01563	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_20	PF05065,PF13620,MF_04119,TIGR04387,TIGR04134,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_22	phrog_581	90.5	1.5e-26	minor head protein	head and packaging
UniRef90	UHGV-1356511_22	UniRef90_A0A2Z4GUI4	399.0	0	Minor capsid protein 2	N/A
Pfam	UHGV-1356511_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1356511_22	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_23	phrog_533	99.4	2.4e-29	portal protein	head and packaging
eggNOG-mapper	UHGV-1356511_23	272626.lin0106	66.6	0.0000000104	Portal protein	N/A
structural_annotation	UHGV-1356511_23	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1356511_24	K06909	142.4	4.19969e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1356511_24	phrog_3717	82.2	6.4e-24	terminase large subunit	head and packaging
UniRef90	UHGV-1356511_24	UniRef90_A0A3D2E0R8	344.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1356511_24	525318.HMPREF0497_1619	95.9	1.54e-18	Terminase RNAseH like domain	N/A
Pfam	UHGV-1356511_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1356511_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1356511_24	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1356511_26	K03497	49.5	0.000000000000057	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1356511_26	phrog_21498	250.4	0	N/A	unknown function
UniRef90	UHGV-1356511_26	UniRef90_R6E8L3	267.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-1356511_26	469378.Ccur_02830	246.0	0	DNA binding	N/A
PADLOC	UHGV-1356511_26	MTase_II_00015	65.6	7.9e-19	Type II methyltransferase	RM
Pfam	UHGV-1356511_26	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1356511_26	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1356511_26	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_27	PF05263,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1356511_28	K03111	138.6	6.89999e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1356511_28	phrog_44	146.7	1.30321e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356511_28	UniRef90_A0A316QG51	178.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1356511_28	1042163.BRLA_c031440	117.0	5.21e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1356511_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1356511_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1356511_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1356511_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1356511_28	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_29	PF11132	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_31	phrog_10455	83.2	2.4e-24	N/A	unknown function
PHROG	UHGV-1356511_33	phrog_13999	79.3	2.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-1356511_33	889338.G3BM21_9CAUD	55.1	0.0000000024	N/A	N/A
PHROG	UHGV-1356511_36	phrog_3136	72.7	3.9e-21	N/A	unknown function
structural_annotation	UHGV-1356511_36	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-1356511_37	K01160	47.8	0.0000000000004	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1356511_37	phrog_140	105.8	4.1e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356511_37	UniRef90_A0A415L586	126.0	9.83e-35	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1356511_37	642492.Clole_2784	108.0	1.97e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1356511_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1356511_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1356511_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_38	phrog_757	213.6	0	DNA methyltransferase	other
UniRef90	UHGV-1356511_38	UniRef90_A0A516LQR9	237.0	0	Putative DNA (Cytosine-5)-methyltransferase	N/A
eggNOG-mapper	UHGV-1356511_38	1235790.C805_00032	281.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1356511_38	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1356511_38	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_39	phrog_4973	66.5	3.6e-19	N/A	unknown function
UniRef90	UHGV-1356511_39	UniRef90_UPI001D0904CC	78.2	2.22e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1356511_39	584708.Apau_1668	51.6	0.000000196	Helix-turn-helix domain	N/A
Pfam	UHGV-1356511_39	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1356511_39	PF14090,TIGR00373,COG4738	N/A	N/A	N/A	N/A
KOfam	UHGV-1356511_42	K17680	129.7	2e-38	PEO1; twinkle protein [EC:5.6.2.3]	N/A
PHROG	UHGV-1356511_42	phrog_19	148.7	3.64338e-44	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356511_42	UniRef90_A0A1I5IYN3	199.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1356511_42	1280689.AUJC01000001_gene1994	125.0	1.36e-29	N/A	N/A
Pfam	UHGV-1356511_42	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1356511_42	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1356511_42	PF03796,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_43	phrog_15768	119.9	3.4e-36	N/A	unknown function
UniRef90	UHGV-1356511_43	UniRef90_A0A3R6FIK8	114.0	1.01e-27	N/A	N/A
eggNOG-mapper	UHGV-1356511_43	476272.RUMHYD_03358	86.7	1.35e-17	N/A	N/A
Pfam	UHGV-1356511_43	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1356511_43	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1356511_44	phrog_155	144.6	6.69821e-43	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1356511_44	UniRef90_UPI0015943421	189.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1356511_44	1298920.KI911353_gene4870	177.0	0	ERF superfamily	N/A
Pfam	UHGV-1356511_44	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1356511_44	PF04404,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1356511_48	K21919	128.2	6.4e-38	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-1356511_48	phrog_923	124.1	6.7e-37	N/A	unknown function
UniRef90	UHGV-1356511_48	UniRef90_UPI001031ED10	141.0	4.48e-38	pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-1356511_48	1235799.C818_02570	138.0	2.12e-37	Pentapeptide repeats (9 copies)	N/A
Pfam	UHGV-1356511_48	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-1356511_48	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-1356511_48	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1356511_48	PF19062,PF13599,NF011744,COG1357	N/A	N/A	N/A	N/A
Pfam	UHGV-1356511_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1356511_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1356511	Yes	34,191	44	100	1
UHGV-1641095	No	14,399	43	41	1