vOTU vOTU-054738

vOTU: vOTU-054738

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054738
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00206 → vSUBFAM-01186 → vGENUS-01151 → vSUBGEN-00554 → vOTU-054738
Host lineage	Bacteria → Patescibacteria → Saccharimonadia → Saccharimonadales → Nanosynbacteraceae → Nanosynbacter
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1357403
Biosample ID	SAMEA2738174
Genome length (bp)	33,453 bps
CheckV completeness	100.00% (Complete)
CDS count	51
CDS density	91.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Patescibacteria → Saccharimonadia → Saccharimonadales → Nanosynbacteraceae → Nanosynbacter	Total connections	3	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1357403_1	phrog_5	68.7	1.2e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1357403_1	UniRef90_UPI001B3435DD	55.1	0.00000017	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1357403_1	1499683.CCFF01000014_gene3905	50.1	0.00000451	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1357403_1	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1357403_1	PF04883,TIGR01725	N/A	N/A	N/A	N/A
Pfam	UHGV-1357403_2	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1357403_2	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_3	phrog_132	52.2	0.0000000000000093	head-tail adaptor	connector
UniRef90	UHGV-1357403_5	UniRef90_A0A0M2NI16	237.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-1357403_5	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_6	phrog_172	102.2	6.3e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-1357403_6	UniRef90_UPI0004868D22	70.9	0.00000000000524	N/A	N/A
eggNOG-mapper	UHGV-1357403_6	1211844.CBLM010000016_gene1492	70.9	0.00000000000088	N/A	N/A
Pfam	UHGV-1357403_6	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1357403_6	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_8	phrog_115	277.6	0	minor head protein	head and packaging
UniRef90	UHGV-1357403_8	UniRef90_A0A7W4DSA2	204.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1357403_8	1209989.TepiRe1_1146	197.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1357403_8	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-1357403_8	PF15644	N/A	N/A	Papain fold toxin 1, glutamine deamidase	Gln_amidase
NCBIFam	UHGV-1357403_8	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1357403_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357403_8	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_9	phrog_64	386.2	0	portal protein	head and packaging
UniRef90	UHGV-1357403_9	UniRef90_A0A7W4DHI0	362.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1357403_9	562981.HMPREF0428_01823	289.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1357403_9	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1357403_9	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1357403_9	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_10	phrog_30251	482.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1357403_10	UniRef90_UPI001F475B4B	450.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1357403_10	469618.FVAG_00794	435.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1357403_10	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1357403_10	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357403_10	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_11	phrog_3322	46.3	0.00000000000012	endonuclease	DNA, RNA and nucleotide metabolism
PHROG	UHGV-1357403_15	phrog_29438	54.1	0.0000000000000026	N/A	unknown function
KOfam	UHGV-1357403_16	K00789	56.0	4.4e-17	metK, MAT; S-adenosylmethionine synthetase [EC:2.5.1.6]	N/A
PHROG	UHGV-1357403_16	phrog_1569	183.8	0	N/A	unknown function
UniRef90	UHGV-1357403_16	UniRef90_A0A3D1HM65	290.0	0	S-adenosylmethionine synthetase	N/A
eggNOG-mapper	UHGV-1357403_16	938288.HG326225_gene1153	289.0	0	S-adenosylmethionine synthetase, N-terminal domain	N/A
Pfam	UHGV-1357403_16	PF00438	N/A	N/A	S-adenosylmethionine synthetase, N-terminal domain	S-AdoMet_synt_N
COG	UHGV-1357403_16	COG0192	N/A	N/A	S-adenosylmethionine synthetase	N/A
structural_annotation	UHGV-1357403_16	PF01941,MF_00086,TIGR01034,COG0192	N/A	N/A	N/A	N/A
Pfam	UHGV-1357403_20	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
KOfam	UHGV-1357403_25	K24451	55.1	3.8e-20	zim; modification methylase	N/A
PHROG	UHGV-1357403_25	phrog_12517	307.7	0	N/A	unknown function
UniRef90	UHGV-1357403_25	UniRef90_A0A6J5LCN9	367.0	0	AdoMet_MTases domain containing protein	N/A
eggNOG-mapper	UHGV-1357403_25	1121097.JCM15093_3233	317.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1357403_25	MTase_II_00137	47.4	0.0000000000003	Type II methyltransferase	RM
Pfam	UHGV-1357403_25	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1357403_25	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1357403_25	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1357403_25	PF05401,PF02195,MF_01872,NF040850,TIGR00180,COG4123,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_28	phrog_824	74.5	1.2e-21	N/A	unknown function
UniRef90	UHGV-1357403_28	UniRef90_A0A660LVV4	77.0	0.00000000000000208	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1357403_28	644966.Tmar_0031	55.1	0.000000123	VRR-NUC domain	N/A
Pfam	UHGV-1357403_28	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-1357403_28	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-1357403_30	K03111	115.0	1e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1357403_30	phrog_44	117.6	1.1e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357403_30	UniRef90_A0A857VC94	119.0	9.43e-32	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1357403_30	546271.Selsp_1347	92.4	3.58e-22	Single-strand binding protein family	N/A
Pfam	UHGV-1357403_30	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1357403_30	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1357403_30	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1357403_30	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1357403_30	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1357403_32	K01143	52.4	0.0000000000000094	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-1357403_32	phrog_149	115.1	5.3e-34	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357403_32	UniRef90_A0A6J5N6Q9	151.0	2.18042e-42	Phage_rel_nuc, putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1357403_32	670292.JH26_14425	132.0	1.55e-35	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-1357403_32	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-1357403_32	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1357403_33	K07455	62.8	7.5e-18	recT; recombination protein RecT	N/A
PHROG	UHGV-1357403_33	phrog_148	63.4	3.2e-18	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
Pfam	UHGV-1357403_33	PF03837	N/A	N/A	RecT family	RecT
COG	UHGV-1357403_33	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
PHROG	UHGV-1357403_36	phrog_391	76.2	4.9e-22	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1357403_36	596315.HMPREF0634_0383	59.7	0.000000111	DnaD domain protein	N/A
Pfam	UHGV-1357403_36	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1357403_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1357403_36	PF13730,MF_01819,NF040939,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_40	phrog_7698	59.9	4.1e-17	endolysin	lysis
eggNOG-mapper	UHGV-1357403_40	1235796.C815_01769	56.6	0.00000266	hydrolase, family 25	N/A
Pfam	UHGV-1357403_40	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1357403_40	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
PHROG	UHGV-1357403_44	phrog_372	321.4	0	tail protein	tail
UniRef90	UHGV-1357403_44	UniRef90_A0A116MYN3	81.6	0.00000000000192	Phage structural protein	N/A
eggNOG-mapper	UHGV-1357403_44	1416759.AYMR01000009_gene3061	99.8	8.63e-19	N/A	N/A
PHROG	UHGV-1357403_45	phrog_2929	98.7	2.3e-29	tail fiber protein	tail
UniRef90	UHGV-1357403_45	UniRef90_A0A7V8A6H9	139.0	5.93e-31	PblB	N/A
eggNOG-mapper	UHGV-1357403_45	658659.HMPREF0983_03295	82.4	0.000000000000256	N/A	N/A
structural_annotation	UHGV-1357403_45	PF04862,PF05113,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_46	phrog_1194	71.8	8e-21	N/A	unknown function
eggNOG-mapper	UHGV-1357403_46	1229517.AMFD01000023_gene1305	53.9	0.000000144	N/A	N/A
structural_annotation	UHGV-1357403_46	PF20458,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_47	phrog_35723	227.6	0	N/A	unknown function
UniRef90	UHGV-1357403_47	UniRef90_UPI00135AD929	399.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1357403_47	650150.ERH_0621	393.0	0	tape measure	N/A
Pfam	UHGV-1357403_47	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1357403_47	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1357403_47	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1357403_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357403_48	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1357403_49	phrog_158	67.4	2.6e-19	major tail protein	tail
UniRef90	UHGV-1357403_49	UniRef90_UPI000210B507	136.0	2.17e-38	phage tail tube protein	N/A
eggNOG-mapper	UHGV-1357403_49	650150.ERH_0618	136.0	3.63e-39	Phage tail tube protein	N/A
Pfam	UHGV-1357403_49	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-1357403_49	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357403_50	PF05657,COG5003	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1357403	Yes	33,453	50	100	1