vOTU vOTU-054783

vOTU: vOTU-054783

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054783
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-14019 → vSUBGEN-23144 → vOTU-054783
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1357981
Biosample ID	SAMN02333939
Genome length (bp)	42,184 bps
CheckV completeness	100.00% (Complete)
CDS count	73
CDS density	95.23%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	269	Host agreement	98.51
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp003539495	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1357981_1	phrog_3099	47.4	0.00000000000038	N/A	unknown function
eggNOG-mapper	UHGV-1357981_1	693746.OBV_18150	152.0	1.4013e-45	N/A	N/A
PHROG	UHGV-1357981_2	phrog_11299	64.4	2.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1357981_2	693746.OBV_18160	134.0	2.16e-38	N/A	N/A
structural_annotation	UHGV-1357981_2	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_3	phrog_706	118.8	4.2e-35	N/A	unknown function
UniRef90	UHGV-1357981_3	UniRef90_A0A2U1BEN4	209.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1357981_3	693746.OBV_18170	196.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1357981_3	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1357981_3	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_4	phrog_1535	112.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1357981_4	UniRef90_A0A810PX76	207.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1357981_4	1235797.C816_04182	347.0	0	SLT domain	N/A
COG	UHGV-1357981_4	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_5	phrog_1194	74.9	9.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-1357981_5	411902.CLOBOL_00125	120.0	1.68e-33	N/A	N/A
structural_annotation	UHGV-1357981_5	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_6	phrog_13879	231.0	0	N/A	unknown function
eggNOG-mapper	UHGV-1357981_6	693746.OBV_18210	377.0	0	N/A	N/A
structural_annotation	UHGV-1357981_6	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_7	phrog_19976	41.1	0.0000000000071	tail assembly protein	tail
KOfam	UHGV-1357981_8	K01104	40.8	0.0000000000044	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-1357981_8	UniRef90_UPI001BF10870	192.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-1357981_8	610130.Closa_0587	70.9	0.0000000000743	Tyrosine phosphatase family	N/A
Pfam	UHGV-1357981_8	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-1357981_8	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
structural_annotation	UHGV-1357981_8	PF13350,TIGR01244,COG2365	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_9	phrog_18725	91.0	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1357981_9	693746.OBV_18220	127.0	2.99e-35	N/A	N/A
structural_annotation	UHGV-1357981_10	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1357981_11	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1357981_11	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_13	phrog_6918	96.9	1.3e-28	holin	lysis
UniRef90	UHGV-1357981_13	UniRef90_A0A316QCY7	102.0	3.48e-26	Holin	N/A
eggNOG-mapper	UHGV-1357981_13	1297617.JPJD01000020_gene301	100.0	2.43e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1357981_13	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1357981_13	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357981_14	UniRef90_UPI00164EA432	223.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1357981_14	525254.HMPREF0072_1273	222.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1357981_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1357981_14	NF033743	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357981_15	UniRef90_A0A1C6JAI6	68.6	0.000000000000177	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1357981_15	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
COG	UHGV-1357981_17	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
UniRef90	UHGV-1357981_18	UniRef90_UPI00164AED9E	84.3	7.19e-19	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1357981_18	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1357981_18	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_19	phrog_3754	105.1	6.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-1357981_19	1226322.HMPREF1545_00073	167.0	0	N/A	N/A
PHROG	UHGV-1357981_20	phrog_21718	110.7	1.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-1357981_20	397290.C810_05210	71.2	0.000000000000204	N/A	N/A
PHROG	UHGV-1357981_21	phrog_22984	76.2	3.5e-22	N/A	unknown function
PHROG	UHGV-1357981_22	phrog_16490	131.8	1.49995e-41	N/A	unknown function
eggNOG-mapper	UHGV-1357981_22	1408437.JNJN01000043_gene803	155.0	7.00649e-44	N/A	N/A
PHROG	UHGV-1357981_23	phrog_20016	178.9	0	N/A	unknown function
UniRef90	UHGV-1357981_23	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1357981_23	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-1357981_23	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_24	phrog_28802	40.1	0.000000000025	N/A	unknown function
structural_annotation	UHGV-1357981_24	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357981_25	1226322.HMPREF1545_00079	105.0	1.03e-27	N/A	N/A
KOfam	UHGV-1357981_26	K14059	128.3	1e-37	int; integrase	N/A
PHROG	UHGV-1357981_26	phrog_1	149.2	3.36312e-44	integrase	integration and excision
UniRef90	UHGV-1357981_26	UniRef90_A0A810Q0Y2	412.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1357981_26	693746.OBV_43340	361.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1357981_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1357981_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1357981_26	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1357981_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1357981_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1357981_27	PF12844	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_30	phrog_5319	48.8	0.000000000000022	outer membrane protein	other
UniRef90	UHGV-1357981_30	UniRef90_A0A3S1E765	75.5	0.000000000000308	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1357981_30	471855.Shel_11450	74.3	0.000000000000563	sh3 domain protein	N/A
Pfam	UHGV-1357981_30	PF12773	N/A	N/A	Double zinc ribbon	DZR
COG	UHGV-1357981_30	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357981_30	PF03843,MF_01959,TIGR00752,NF041910,COG3390	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357981_33	476272.RUMHYD_03309	66.2	0.00000000000118	N/A	N/A
structural_annotation	UHGV-1357981_33	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_34	phrog_8	44.3	0.0000000000042	transcriptional regulator	transcription regulation
UniRef90	UHGV-1357981_34	UniRef90_UPI001E54DE4F	84.7	3.64e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1357981_34	1378168.N510_01712	67.4	0.00000000000546	N/A	N/A
Pfam	UHGV-1357981_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1357981_34	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357981_36	UniRef90_A0A1C7FQD9	88.2	1.63e-21	Transcriptional regulator	N/A
Pfam	UHGV-1357981_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1357981_36	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357981_37	UniRef90_UPI000F0633F9	65.5	0.00000000000123	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1357981_37	1235835.C814_03153	77.8	3.29e-18	N/A	N/A
structural_annotation	UHGV-1357981_37	PF09035,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_42	phrog_124	113.3	2.2e-33	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357981_42	UniRef90_A0A2Z4QBI4	393.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-1357981_42	445972.ANACOL_00146	223.0	0	AAA domain	N/A
Pfam	UHGV-1357981_42	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1357981_42	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-1357981_42	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-1357981_43	UniRef90_A0A2Z4QA33	241.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-1357981_43	718252.FP2_01050	132.0	6.43e-36	N/A	N/A
structural_annotation	UHGV-1357981_43	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_44	phrog_378	93.9	2.1e-27	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357981_44	UniRef90_UPI001E43F9BA	71.6	0.000000000000791	N/A	N/A
eggNOG-mapper	UHGV-1357981_44	1423732.BALS01000134_gene393	64.3	0.000000000119	N/A	N/A
structural_annotation	UHGV-1357981_44	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_45	phrog_5810	72.4	6.5e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1357981_45	UniRef90_UPI00145BE7DD	105.0	9.32e-24	N/A	N/A
eggNOG-mapper	UHGV-1357981_45	742740.HMPREF9474_03117	191.0	0	N/A	N/A
structural_annotation	UHGV-1357981_45	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
Pfam	UHGV-1357981_47	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1357981_47	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-1357981_49	K07317	54.4	0.0000000000000016	K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1357981_49	phrog_21201	60.6	2.3e-17	DNA methyltransferase	other
UniRef90	UHGV-1357981_49	UniRef90_UPI001C033A7E	113.0	2.28e-29	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1357981_49	1170318.PALO_02835	75.5	0.0000000000000107	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-1357981_49	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1357981_49	PF20473,MF_02217,NF001556,COG0742	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_50	phrog_3136	124.9	3.5e-37	N/A	unknown function
UniRef90	UHGV-1357981_50	UniRef90_UPI001A9A8D4F	107.0	1.41e-26	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1357981_50	642492.Clole_1416	74.3	0.00000000000000388	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1357981_50	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1357981_50	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1357981_50	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_51	phrog_38832	63.8	5.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1357981_51	665956.HMPREF1032_00143	65.1	0.000000000124	N/A	N/A
UniRef90	UHGV-1357981_55	UniRef90_UPI0019D1E2CF	260.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1357981_55	1410632.JHWW01000006_gene695	204.0	0	N/A	N/A
structural_annotation	UHGV-1357981_55	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_56	phrog_1770	55.6	0.0000000000000011	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1357981_56	536233.CLO_1822	132.0	7.44e-37	N/A	N/A
structural_annotation	UHGV-1357981_56	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_59	phrog_801	74.1	2.5e-21	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1357981_59	UniRef90_A0A316M891	99.8	6.56e-25	N/A	N/A
eggNOG-mapper	UHGV-1357981_59	1366055.S5MLS6_9CAUD	62.8	0.000000000162	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1357981_59	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1357981_59	PF18909	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357981_60	742738.HMPREF9460_02503	95.9	1.46e-24	N/A	N/A
structural_annotation	UHGV-1357981_60	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357981_61	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1357981_62	K07474	102.3	8.9e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1357981_62	phrog_51	112.8	2.6e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1357981_62	UniRef90_A0A396NMY4	131.0	6.95e-37	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1357981_62	476272.RUMHYD_01754	125.0	2.14e-35	Terminase small subunit	N/A
Pfam	UHGV-1357981_62	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1357981_62	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1357981_62	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1357981_63	K06909	116.7	2.3e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1357981_63	phrog_2	87.2	2.9e-25	terminase large subunit	head and packaging
UniRef90	UHGV-1357981_63	UniRef90_A0A0X8VAD6	447.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1357981_63	1449050.JNLE01000003_gene3895	425.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1357981_63	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1357981_63	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1357981_63	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_64	phrog_533	390.4	0	portal protein	head and packaging
UniRef90	UHGV-1357981_64	UniRef90_A0A1C5N775	586.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1357981_64	1226322.HMPREF1545_00044	547.0	0	N/A	N/A
Pfam	UHGV-1357981_64	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1357981_64	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_66	phrog_581	288.0	0	minor head protein	head and packaging
UniRef90	UHGV-1357981_66	UniRef90_UPI001D080D49	494.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1357981_66	1226322.HMPREF1545_00046	360.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1357981_66	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1357981_66	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357981_66	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1357981_67	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_68	phrog_544	187.4	0	major head protein	head and packaging
UniRef90	UHGV-1357981_68	UniRef90_A0A810PZM2	496.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1357981_68	1347392.CCEZ01000005_gene1236	293.0	0	N/A	N/A
structural_annotation	UHGV-1357981_68	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_69	phrog_541	102.8	2.2e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-1357981_69	642492.Clole_0822	68.6	0.000000000000737	N/A	N/A
PHROG	UHGV-1357981_70	phrog_3366	104.1	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-1357981_70	1226322.HMPREF1545_00053	172.0	0	N/A	N/A
Pfam	UHGV-1357981_70	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1357981_70	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_71	phrog_556	73.7	2.2e-21	minor head protein	head and packaging
UniRef90	UHGV-1357981_71	UniRef90_UPI00195E1497	211.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1357981_71	1226322.HMPREF1545_00054	164.0	0	Minor capsid protein	N/A
Pfam	UHGV-1357981_71	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1357981_71	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1357981_72	phrog_3266	51.1	0.000000000000019	tail completion	connector
eggNOG-mapper	UHGV-1357981_72	1232443.BAIA02000078_gene24	171.0	0	N/A	N/A
structural_annotation	UHGV-1357981_72	PF12691	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1357981_73	1235797.C816_04186	94.7	6.99e-24	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1357981	Yes	42,184	53	100	1
UHGV-1447720	No	44,885	53	100	1
UHGV-1377471	No	41,986	53	100	1
UHGV-1470710	No	40,865	53	97	1
UHGV-1405616	No	27,185	54	64	1
UHGV-1613140	No	12,357	51	30	1