vOTU vOTU-054802

vOTU: vOTU-054802

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054802
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-02278 → vGENUS-03839 → vSUBGEN-14004 → vOTU-054802
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UBA11774 → UBA11774 sp003507655
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1358280
Biosample ID	N/A
Genome length (bp)	33,693 bps
CheckV completeness	100.00% (Complete)
CDS count	57
CDS density	91.33%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UBA11774 → UBA11774 sp003507655	Total connections	257	Host agreement	92.61
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → UBA11774 → UBA11774 sp003507655	Total connections	13	Host agreement	92.31

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1358280_1	phrog_1272	148.6	2.94273e-44	tail length tape measure protein	tail
UniRef90	UHGV-1358280_1	UniRef90_A0A6N7Y0D1	169.0	9.99967e-42	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1358280_1	1121866.AUGK01000006_gene888	147.0	3.69e-35	Phage-related minor tail protein	N/A
COG	UHGV-1358280_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1358280_2	phrog_33	50.2	0.000000000000062	distal tail protein Dit	tail
UniRef90	UHGV-1358280_2	UniRef90_UPI0015709E93	217.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1358280_2	411461.DORFOR_01176	181.0	0	N/A	N/A
structural_annotation	UHGV-1358280_2	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_3	phrog_538	121.0	0	minor tail protein	tail
UniRef90	UHGV-1358280_3	UniRef90_W0FH81	311.0	0	Phage head fiber protein	N/A
eggNOG-mapper	UHGV-1358280_3	1256908.HMPREF0373_00466	210.0	0	N/A	N/A
Pfam	UHGV-1358280_3	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1358280_3	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_4	phrog_9994	180.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1358280_4	1256908.HMPREF0373_00465	172.0	0	N/A	N/A
structural_annotation	UHGV-1358280_4	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_5	phrog_4105	68.8	6.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-1358280_5	1235790.C805_00613	160.0	0	N/A	N/A
PHROG	UHGV-1358280_6	phrog_443	57.1	5.2e-16	holin	lysis
UniRef90	UHGV-1358280_6	UniRef90_A0A1I0HNR6	95.1	2.25e-24	Holin, r1t family	N/A
eggNOG-mapper	UHGV-1358280_6	397288.C806_00114	89.0	1.04e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1358280_6	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1358280_6	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1358280_7	K17733	147.2	1.09301e-43	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-1358280_7	phrog_2649	182.4	0	endolysin	lysis
UniRef90	UHGV-1358280_7	UniRef90_A0A7X5C6M9	368.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358280_7	397290.C810_03258	367.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-1358280_7	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
Pfam	UHGV-1358280_7	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1358280_7	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
PHROG	UHGV-1358280_8	phrog_13890	49.8	0.000000000000027	N/A	unknown function
UniRef90	UHGV-1358280_10	UniRef90_R7QUM8	65.5	0.00000000000101	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1358280_10	411461.DORFOR_01128	56.6	0.000000000538	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1358280_10	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1358280_10	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358280_12	UniRef90_UPI001D047288	109.0	8.01e-26	Ltp family lipoprotein	N/A
KOfam	UHGV-1358280_14	K18830	72.5	5.5e-21	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1358280_14	phrog_8	50.2	0.000000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-1358280_14	UniRef90_A0A3R6JTC8	171.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1358280_14	887325.HMPREF0381_0352	148.0	2.10195e-44	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1358280_14	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1358280_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1358280_14	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_24	phrog_36	68.1	1.5e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1358280_24	1235793.C809_01914	57.8	0.0000000141	sigma factor activity	N/A
Pfam	UHGV-1358280_24	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1358280_24	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1358280_24	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_25	phrog_2562	119.7	7e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358280_25	UniRef90_A0A174JL72	280.0	0	N/A	N/A
eggNOG-mapper	UHGV-1358280_25	1232453.BAIF02000057_gene1144	280.0	0	N/A	N/A
Pfam	UHGV-1358280_25	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1358280_25	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1358280_25	PF14297,TIGR01714	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358280_28	UniRef90_UPI00156ED5AF	131.0	1.65e-37	N/A	N/A
eggNOG-mapper	UHGV-1358280_28	1256908.HMPREF0373_00667	114.0	2.65e-31	N/A	N/A
Pfam	UHGV-1358280_28	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-1358280_29	phrog_2600	141.7	5.5001e-42	N/A	unknown function
eggNOG-mapper	UHGV-1358280_29	1178540.BA70_18565	179.0	0	N/A	N/A
PHROG	UHGV-1358280_31	phrog_38832	47.1	0.00000000000035	N/A	unknown function
UniRef90	UHGV-1358280_31	UniRef90_A0A415TX35	146.0	3.95026e-42	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-1358280_31	476272.RUMHYD_03348	60.1	0.00000000158	N/A	N/A
PHROG	UHGV-1358280_33	phrog_10714	41.5	0.000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1358280_33	1235800.C819_02246	62.8	0.000000000298	N/A	N/A
PHROG	UHGV-1358280_34	phrog_6380	146.8	1.20512e-43	DNA methyltransferase	other
UniRef90	UHGV-1358280_34	UniRef90_UPI00164BDD89	236.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1358280_34	1095750.HMPREF9970_0171	171.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-1358280_34	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1358280_34	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1358280_34	PF02475,MF_02217,NF000058,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-1358280_35	K03427	112.8	3.6e-33	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-1358280_35	phrog_6380	239.8	0	DNA methyltransferase	other
UniRef90	UHGV-1358280_35	UniRef90_UPI00189920FD	555.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-1358280_35	1095750.HMPREF9970_0172	257.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
PADLOC	UHGV-1358280_35	MTase_I_00005	88.7	1.6e-26	Type I methyltransferase	RM
Pfam	UHGV-1358280_35	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-1358280_35	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1358280_35	PF02384,TIGR00497,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_38	phrog_374	218.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358280_38	UniRef90_I4A6C6	183.0	0	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1358280_38	756499.Desde_1078	183.0	0	N/A	N/A
KOfam	UHGV-1358280_41	K06400	338.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1358280_41	phrog_95	342.1	0	integrase	integration and excision
UniRef90	UHGV-1358280_41	UniRef90_R6TQK5	469.0	0	Resolvase N-terminal domain protein	N/A
eggNOG-mapper	UHGV-1358280_41	1384065.JAGS01000001_gene1134	429.0	0	N/A	N/A
Pfam	UHGV-1358280_41	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1358280_41	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1358280_41	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1358280_41	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
KOfam	UHGV-1358280_43	K04763	122.8	3.7e-36	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1358280_43	phrog_216	179.8	0	integrase	integration and excision
UniRef90	UHGV-1358280_43	UniRef90_A0A1Q9J4X9	276.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1358280_43	1235793.C809_02656	207.0	0	PFAM Phage integrase family	N/A
Pfam	UHGV-1358280_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1358280_43	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1358280_43	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-1358280_44	K07451	43.1	0.000000000007	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1358280_44	phrog_119	64.7	1.3e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1358280_44	UniRef90_A0A412EM28	183.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1358280_44	768710.DesyoDRAFT_1275	95.5	5.34e-23	HNH nucleases	N/A
COG	UHGV-1358280_44	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1358280_45	phrog_5110	109.6	1.2e-32	terminase small subunit	head and packaging
UniRef90	UHGV-1358280_45	UniRef90_UPI000A26C9C4	131.0	3.09e-37	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1358280_45	349161.Dred_2608	99.8	1.14e-25	N/A	N/A
Pfam	UHGV-1358280_45	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1358280_45	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_46	phrog_9	252.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1358280_46	UniRef90_A0A412EM51	824.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1358280_46	610130.Closa_0741	773.0	0	Phage Terminase	N/A
Pfam	UHGV-1358280_46	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1358280_46	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1358280_46	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1358280_46	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_47	phrog_12	100.5	6.1e-30	portal protein	head and packaging
UniRef90	UHGV-1358280_47	UniRef90_A0A173RYU7	476.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1358280_47	349161.Dred_2606	224.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1358280_47	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1358280_47	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1358280_47	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1358280_47	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1358280_48	K01358	123.1	3e-36	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1358280_48	phrog_94	197.5	0	head maturation protease	head and packaging
UniRef90	UHGV-1358280_48	UniRef90_UPI001E5033E0	232.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1358280_48	1235792.C808_00085	225.0	0	Clp protease	N/A
Pfam	UHGV-1358280_48	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1358280_48	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1358280_48	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_49	phrog_10	88.5	7.9e-26	major head protein	head and packaging
UniRef90	UHGV-1358280_49	UniRef90_A0A173S099	478.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1358280_49	1211817.CCAT010000053_gene2132	332.0	0	Phage capsid family	N/A
Pfam	UHGV-1358280_49	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1358280_49	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1358280_49	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1358280_49	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_50	phrog_749	54.9	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-1358280_50	UniRef90_W0FM58	96.7	9.32e-24	Gp6 protein	N/A
eggNOG-mapper	UHGV-1358280_50	1211817.CCAT010000008_gene943	49.3	0.00000293	N/A	N/A
PHROG	UHGV-1358280_51	phrog_5635	58.3	1.5e-16	head-tail adaptor	connector
UniRef90	UHGV-1358280_51	UniRef90_UPI0011070497	93.2	2.76e-22	phage head closure protein	N/A
eggNOG-mapper	UHGV-1358280_51	1220589.CD32_01710	57.4	0.00000000633	N/A	N/A
structural_annotation	UHGV-1358280_51	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1358280_52	1121866.AUGK01000006_gene883	55.5	0.0000000351	N/A	N/A
structural_annotation	UHGV-1358280_52	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1358280_53	phrog_5509	88.6	5.2e-26	neck protein	connector
UniRef90	UHGV-1358280_53	UniRef90_W0FMR6	97.8	1.34e-23	Gp9 protein	N/A
eggNOG-mapper	UHGV-1358280_53	1408823.AXUS01000025_gene2627	79.7	2.56e-17	N/A	N/A
structural_annotation	UHGV-1358280_53	TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1358280_54	UniRef90_A0A316S919	162.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1358280_54	1121866.AUGK01000006_gene884	164.0	0	N/A	N/A
structural_annotation	UHGV-1358280_54	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-1358280_55	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
eggNOG-mapper	UHGV-1358280_56	1121866.AUGK01000006_gene886	68.9	0.000000000000207	N/A	N/A
PHROG	UHGV-1358280_57	phrog_1272	150.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1358280_57	UniRef90_UPI00084A6962	77.0	0.00000000000602	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1358280_57	1384484.AEQU_1171	172.0	6.5861e-44	Phage-related minor tail protein	N/A
Pfam	UHGV-1358280_57	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1358280_57	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1358280_57	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1358280	Yes	33,693	41	100	1