vOTU vOTU-054899

vOTU: vOTU-054899

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-054899
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00569 → vGENUS-00424 → vSUBGEN-01223 → vOTU-054899
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1359455
Biosample ID	N/A
Genome length (bp)	42,359 bps
CheckV completeness	100.00% (Complete)
CDS count	71
CDS density	94.17%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985	Total connections	149	Host agreement	81.21
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1359455_2	phrog_1863	63.2	2.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1359455_2	1226322.HMPREF1545_04027	66.6	0.000000000000203	N/A	N/A
PHROG	UHGV-1359455_3	phrog_443	59.8	7.5e-17	holin	lysis
UniRef90	UHGV-1359455_3	UniRef90_Q48T76	77.8	1.07e-17	N/A	N/A
eggNOG-mapper	UHGV-1359455_3	1314.HKU360_01470	80.9	1.08e-19	N/A	N/A
Pfam	UHGV-1359455_3	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1359455_3	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_4	phrog_355	58.3	1.2e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1359455_4	UniRef90_A0A396KGT7	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-1359455_4	97138.C820_00250	131.0	2.38e-38	N/A	N/A
Pfam	UHGV-1359455_4	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1359455_4	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_5	phrog_14030	132.4	3.2e-39	N/A	unknown function
UniRef90	UHGV-1359455_5	UniRef90_G5FC83	186.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-1359455_5	742765.HMPREF9457_03362	177.0	0	N/A	N/A
structural_annotation	UHGV-1359455_5	PF08239,NF040678,COG4991	N/A	N/A	N/A	N/A
UniRef90	UHGV-1359455_7	UniRef90_A0A285PXT6	70.9	0.0000000000000256	Winged helix-turn-helix DNA-binding domain	N/A
eggNOG-mapper	UHGV-1359455_8	1408311.JNJM01000003_gene2963	73.6	0.000000000000566	N/A	N/A
PHROG	UHGV-1359455_9	phrog_3754	88.3	8.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1359455_9	476272.RUMHYD_01764	155.0	0	N/A	N/A
PHROG	UHGV-1359455_10	phrog_21718	92.0	5.9e-27	N/A	unknown function
UniRef90	UHGV-1359455_10	UniRef90_A0A285PT36	117.0	1.34e-30	Consensus disorder prediction	N/A
eggNOG-mapper	UHGV-1359455_10	397290.C810_05210	70.1	0.000000000000809	N/A	N/A
PHROG	UHGV-1359455_11	phrog_22984	68.2	1.1e-19	N/A	unknown function
PHROG	UHGV-1359455_12	phrog_16490	67.8	6.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1359455_12	397290.C810_05212	110.0	7.75e-26	N/A	N/A
PHROG	UHGV-1359455_13	phrog_20016	91.3	7e-27	N/A	unknown function
eggNOG-mapper	UHGV-1359455_13	397290.C810_05214	60.8	0.000000000711	N/A	N/A
structural_annotation	UHGV-1359455_13	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1359455_14	PF12510	N/A	N/A	N/A	N/A
UniRef90	UHGV-1359455_18	UniRef90_A0A416JGA1	64.7	0.00000000000329	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1359455_18	742765.HMPREF9457_02243	52.8	0.0000000283	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-1359455_18	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1359455_19	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1359455_21	K06400	266.2	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1359455_21	phrog_95	281.2	0	integrase	integration and excision
UniRef90	UHGV-1359455_21	UniRef90_A0A285PUJ0	328.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-1359455_21	357809.Cphy_2997	240.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-1359455_21	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1359455_21	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1359455_21	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1359455_21	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1359455_23	K22300	57.8	2.6e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1359455_23	phrog_2967	51.8	0.000000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1359455_23	UniRef90_A0A6L5TDK1	63.5	0.000000000478	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1359455_23	459349.CLOAM0116	55.5	0.000000241	Evidence 5 No homology to any previously reported sequences	N/A
Pfam	UHGV-1359455_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1359455_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1359455_23	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1359455_24	K18830	60.3	4.1e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1359455_24	phrog_8	49.5	0.000000000000043	transcriptional regulator	transcription regulation
UniRef90	UHGV-1359455_24	UniRef90_A0A4S2A8B1	99.0	3.66e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1359455_24	748224.HMPREF9436_01444	89.0	9.23e-21	N/A	N/A
Pfam	UHGV-1359455_24	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1359455_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1359455_24	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_32	phrog_463	180.9	0	anti-repressor	transcription regulation
eggNOG-mapper	UHGV-1359455_32	596329.HMPREF0631_1352	176.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-1359455_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1359455_32	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1359455_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1359455_32	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_36	phrog_13561	41.1	0.000000000022	N/A	unknown function
structural_annotation	UHGV-1359455_36	PF21441	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_37	phrog_253	131.9	3.8e-39	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1359455_37	UniRef90_A0A1C6CBG4	135.0	1.04e-37	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1359455_37	411470.RUMGNA_02192	115.0	1.44e-30	Siphovirus Gp157	N/A
Pfam	UHGV-1359455_37	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1359455_37	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_39	phrog_14970	238.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1359455_39	1235799.C818_00195	194.0	0	double-strand break repair protein	N/A
Pfam	UHGV-1359455_39	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1359455_39	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1359455_39	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1359455_40	991905.SL003B_3762	56.6	0.00000000487	N/A	N/A
KOfam	UHGV-1359455_41	K03111	133.5	2.6e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1359455_41	phrog_44	130.6	1.2e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1359455_41	UniRef90_A0A7G9G0M5	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1359455_41	742740.HMPREF9474_02547	192.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1359455_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1359455_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1359455_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1359455_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1359455_41	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_43	phrog_72	57.1	2.8e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1359455_43	UniRef90_A0A285PU94	100.0	1.57e-23	Recombinase NinB	N/A
eggNOG-mapper	UHGV-1359455_43	1304866.K413DRAFT_1197	115.0	3.74e-30	N/A	N/A
structural_annotation	UHGV-1359455_43	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_45	phrog_10469	172.5	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1359455_45	UniRef90_A0A396P2Q5	228.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1359455_45	457412.RSAG_04664	173.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1359455_45	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1359455_45	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-1359455_45	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_46	phrog_9804	114.2	1e-33	N/A	unknown function
UniRef90	UHGV-1359455_46	UniRef90_A0A1C5T9U7	115.0	1.67e-28	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-1359455_46	697281.Mahau_0086	101.0	3.64e-24	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-1359455_46	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1359455_46	PF11417	N/A	N/A	N/A	N/A
UniRef90	UHGV-1359455_47	UniRef90_A0A7X5HZT5	100.0	2.04e-25	C2H2-type domain-containing protein	N/A
UniRef90	UHGV-1359455_49	UniRef90_UPI00164C963D	87.4	1.1e-19	N/A	N/A
PHROG	UHGV-1359455_50	phrog_7566	98.0	5.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-1359455_50	411471.SUBVAR_05830	85.1	3.43e-20	N/A	N/A
COG	UHGV-1359455_52	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1359455_52	PF05225,NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-1359455_54	K07474	123.0	4.1e-36	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1359455_54	phrog_2606	340.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-1359455_54	UniRef90_A0A416BKP7	358.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1359455_54	478749.BRYFOR_07604	295.0	0	terminase, small subunit	N/A
Pfam	UHGV-1359455_54	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1359455_54	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1359455_54	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1359455_54	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1359455_55	K06909	137.9	9.99995e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1359455_55	phrog_10250	184.0	0	N/A	unknown function
UniRef90	UHGV-1359455_55	UniRef90_UPI00059A8066	591.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1359455_55	903814.ELI_3215	575.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1359455_55	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1359455_55	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1359455_55	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1359455_55	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1359455_55	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_56	phrog_64	167.6	0	portal protein	head and packaging
UniRef90	UHGV-1359455_56	UniRef90_A0A856HZB4	458.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1359455_56	673376.F2VHW1_9CAUD	222.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1359455_56	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1359455_56	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_57	phrog_595	128.3	8.9e-38	head maturation protease	head and packaging
UniRef90	UHGV-1359455_57	UniRef90_A0A285PUG1	292.0	0	Phage head morphogenesis domain	N/A
eggNOG-mapper	UHGV-1359455_57	1280685.AUKC01000004_gene1632	170.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1359455_57	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1359455_57	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1359455_57	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1359455_57	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_58	phrog_5	80.7	2.5e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-1359455_58	UniRef90_A0A3A9EIF3	164.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1359455_58	1280685.AUKC01000004_gene1630	125.0	4.54e-35	N/A	N/A
Pfam	UHGV-1359455_58	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1359455_58	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1359455_58	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1359455_59	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_60	phrog_247	274.3	0	major head protein	head and packaging
UniRef90	UHGV-1359455_60	UniRef90_UPI001E4E7823	343.0	0	phage coat protein	N/A
eggNOG-mapper	UHGV-1359455_60	445335.CBN_1379	324.0	0	N/A	N/A
COG	UHGV-1359455_60	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-1359455_60	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_62	phrog_17977	81.3	8.4e-24	N/A	unknown function
UniRef90	UHGV-1359455_62	UniRef90_A0A285PT57	137.0	7.28e-40	Phage head-tail joining protein	N/A
structural_annotation	UHGV-1359455_62	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_63	phrog_1233	74.0	2.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1359455_63	936375.HMPREF1152_1074	93.6	3.75e-23	N/A	N/A
structural_annotation	UHGV-1359455_64	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_65	phrog_885	80.0	2.7e-23	major tail protein	tail
UniRef90	UHGV-1359455_65	UniRef90_A0A843J9F0	172.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1359455_65	1111121.HMPREF1247_0789	185.0	0	N/A	N/A
structural_annotation	UHGV-1359455_65	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_68	phrog_1272	237.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1359455_68	641112.ACOK01000073_gene2904	248.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1359455_68	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1359455_68	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1359455_68	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-1359455_69	phrog_33	82.2	1.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-1359455_69	UniRef90_A0A173Z1X4	196.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1359455_69	1160721.RBI_I01575	160.0	0	Phage tail protein	N/A
COG	UHGV-1359455_69	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1359455_69	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1359455_70	phrog_1067	295.6	0	minor head protein	head and packaging
UniRef90	UHGV-1359455_70	UniRef90_A0A7G9G6Y3	392.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1359455_70	1123263.AUKY01000068_gene489	315.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1359455_70	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1359455_70	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1359455_70	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1359455_70	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1359455_70	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
Pfam	UHGV-1359455_71	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1359455	Yes	42,359	43	100	1