vOTU vOTU-055036

vOTU: vOTU-055036

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-055036
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00143 → vSUBFAM-01058 → vGENUS-00980 → vSUBGEN-00470 → vOTU-055036
Host lineage	Bacteria → Patescibacteria → Saccharimonadia → Saccharimonadales → Saccharimonadaceae → Saccharimonas → Saccharimonas sp015257605
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1360982
Biosample ID	N/A
Genome length (bp)	34,623 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	93.61%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Patescibacteria → Saccharimonadia → Saccharimonadales → Saccharimonadaceae → Saccharimonas → Saccharimonas sp015257605	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1360982_1	phrog_10	118.1	1e-34	major head protein	head and packaging
UniRef90	UHGV-1360982_1	UniRef90_A0A660MB76	393.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1360982_1	1429046.RR21198_3995	111.0	4.81e-26	Phage capsid family	N/A
Pfam	UHGV-1360982_1	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1360982_1	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1360982_1	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
PHROG	UHGV-1360982_2	phrog_617	51.7	0.0000000000000079	major head protein	head and packaging
UniRef90	UHGV-1360982_2	UniRef90_A0A380CQB5	57.4	0.00000797	Phage prohead protease, HK97 family	N/A
COG	UHGV-1360982_2	COG3740	N/A	N/A	Phage head maturation protease	N/A
PHROG	UHGV-1360982_3	phrog_2662	363.3	0	portal protein	head and packaging
UniRef90	UHGV-1360982_3	UniRef90_A0A660MAD9	1434.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1360982_3	234621.RER_25110	266.0	0	Portal protein	N/A
Pfam	UHGV-1360982_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
Pfam	UHGV-1360982_3	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1360982_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1360982_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1360982_3	PF04860,PF04233,MF_04135,TIGR01537,TIGR01641,COG4695,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_4	phrog_38	79.2	4.6e-23	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-1360982_4	797304.Natgr_3429	254.0	0	chromosome segregation	N/A
COG	UHGV-1360982_4	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360982_4	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1360982_5	59931.WH7805_11858	52.4	0.00000254	N/A	N/A
KOfam	UHGV-1360982_7	K03111	117.4	2e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1360982_7	phrog_44	111.2	1e-32	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360982_7	UniRef90_A0A660MA96	266.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1360982_7	469378.Ccur_11550	97.8	3.66e-24	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1360982_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1360982_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1360982_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1360982_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1360982_7	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_8	phrog_3784	51.9	0.000000000000012	N/A	unknown function
KOfam	UHGV-1360982_12	K03497	53.2	0.0000000000000074	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1360982_12	phrog_620	110.2	1.3e-32	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360982_12	UniRef90_A0A660M9I2	742.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1360982_12	909663.KI867149_gene3250	92.8	7.61e-18	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1360982_12	MTase_II_00015	54.1	0.0000000000000026	Type II methyltransferase	RM
Pfam	UHGV-1360982_12	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1360982_12	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1360982_12	PF02195,PF01170,MF_02015,MF_01872,TIGR01177,TIGR04285,COG1041,COG5119	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1360982_15	PF11305,NF033216	N/A	N/A	N/A	N/A
UniRef90	UHGV-1360982_16	UniRef90_A0A660MBL1	394.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1360982_19	272134.KB731324_gene3488	58.2	0.00000068	tape measure	N/A
Pfam	UHGV-1360982_19	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-1360982_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-1360982_20	UniRef90_A0A660MCK6	539.0	0	GH16 domain-containing protein	N/A
eggNOG-mapper	UHGV-1360982_20	1280686.AUKE01000009_gene875	65.1	0.00000000488	Beta/gamma crystallins	N/A
COG	UHGV-1360982_20	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
KOfam	UHGV-1360982_29	K18955	87.1	3.5e-25	whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator	N/A
PHROG	UHGV-1360982_29	phrog_1333	69.3	6.9e-20	N/A	unknown function
UniRef90	UHGV-1360982_29	UniRef90_A0A660MB49	184.0	0	WhiB family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1360982_29	1122994.AUFR01000031_gene613	72.0	0.00000000000000171	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA	N/A
Pfam	UHGV-1360982_29	PF02467	N/A	N/A	Transcription factor WhiB	Whib
structural_annotation	UHGV-1360982_29	PF02467,MF_01479	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_33	phrog_824	40.7	0.000000000019	N/A	unknown function
PHROG	UHGV-1360982_35	phrog_155	115.1	5.8e-34	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1360982_35	UniRef90_A0A416D916	95.1	4.22e-20	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1360982_35	1397699.JNIS01000001_gene2444	84.3	6.66e-17	ERF superfamily	N/A
Pfam	UHGV-1360982_35	PF04404	N/A	N/A	ERF superfamily	ERF
UniRef90	UHGV-1360982_39	UniRef90_A0A660MB57	642.0	0	N/A	N/A
Pfam	UHGV-1360982_39	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1360982_39	PF13946	N/A	N/A	N/A	DUF4214
COG	UHGV-1360982_39	COG2340	N/A	N/A	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	N/A
PHROG	UHGV-1360982_43	phrog_3398	47.6	0.00000000000022	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1360982_43	1196031.ALEG01000039_gene1828	60.8	0.000000113	N/A	N/A
PHROG	UHGV-1360982_47	phrog_1885	84.6	9.8e-25	minor tail protein	tail
structural_annotation	UHGV-1360982_47	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_48	phrog_5577	112.5	4e-33	minor tail protein	tail
UniRef90	UHGV-1360982_48	UniRef90_A0A660MA29	537.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1360982_48	1280692.AUJL01000004_gene834	75.9	0.000000000000354	Phage tail protein	N/A
Pfam	UHGV-1360982_48	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1360982_48	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1360982_48	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_49	phrog_991	371.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1360982_49	UniRef90_A0A660MB66	1115.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1360982_49	697281.Mahau_2902	271.0	0	tail tape measure protein TP901 core region	N/A
Pfam	UHGV-1360982_49	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1360982_49	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1360982_49	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1360982_49	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_51	phrog_290	83.3	3e-24	minor tail protein	tail
eggNOG-mapper	UHGV-1360982_51	234621.RER_25210	115.0	4.87e-27	N/A	N/A
Pfam	UHGV-1360982_51	PF18906	N/A	N/A	Phage tail tube protein	Phage_tube_2
structural_annotation	UHGV-1360982_51	PF18906,TIGR02241,TIGR02126,COG5437,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_54	phrog_5	43.4	0.0000000000078	tail completion or Neck1 protein	connector
UniRef90	UHGV-1360982_54	UniRef90_A0A7T5EY71	53.1	0.00000857	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1360982_54	234621.RER_25180	70.1	0.000000000000491	N/A	N/A
PHROG	UHGV-1360982_56	phrog_442	77.7	1.5e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-1360982_56	234621.RER_25160	65.5	0.000000000128	N/A	N/A
Pfam	UHGV-1360982_56	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1360982_56	TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-1360982_58	phrog_10	57.3	2.9e-16	major head protein	head and packaging
eggNOG-mapper	UHGV-1360982_58	889378.Spiaf_1576	53.9	0.00000225	Phage capsid family	N/A
Pfam	UHGV-1360982_58	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1360982_58	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1360982_58	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1360982	Yes	34,623	49	100	1