vOTU vOTU-056643

vOTU: vOTU-056643

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-056643
Number of genomes	6
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00474 → vGENUS-00565 → vSUBGEN-28217 → vOTU-056643
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1370995
Biosample ID	SAMEA3664561
Genome length (bp)	42,653 bps
CheckV completeness	100.00% (Complete)
CDS count	66
CDS density	93.80%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02	Total connections	60	Host agreement	93.33
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → F23-B02 → F23-B02 sp001916715	Total connections	19	Host agreement	94.74

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1370995_1	phrog_27197	72.3	6.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1370995_1	886882.PPSC2_p0363	88.6	2.36e-19	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1370995_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
KOfam	UHGV-1370995_2	K01449	50.2	0.000000000000051	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1370995_2	phrog_30550	146.5	1.09301e-43	N/A	unknown function
UniRef90	UHGV-1370995_2	UniRef90_R6CIF0	124.0	5.53e-33	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1370995_2	1519439.JPJG01000077_gene920	107.0	1.39e-27	Cell Wall Hydrolase	N/A
Pfam	UHGV-1370995_2	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-1370995_2	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
KOfam	UHGV-1370995_3	K00558	43.2	0.000000000003	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1370995_3	phrog_757	114.3	9.5e-34	DNA methyltransferase	other
UniRef90	UHGV-1370995_3	UniRef90_A0A8D9PDD1	379.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-1370995_3	622312.ROSEINA2194_01264	369.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-1370995_3	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1370995_3	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1370995_3	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_5	phrog_38832	41.8	0.0000000000005	N/A	unknown function
eggNOG-mapper	UHGV-1370995_5	1232443.BAIA02000078_gene48	58.5	0.00000000211	N/A	N/A
Pfam	UHGV-1370995_6	PF00569	N/A	N/A	Zinc finger, ZZ type	ZZ
PHROG	UHGV-1370995_8	phrog_2164	47.2	0.00000000000038	N/A	unknown function
PHROG	UHGV-1370995_13	phrog_18716	143.8	4.30199e-43	N/A	unknown function
UniRef90	UHGV-1370995_13	UniRef90_A0A1J0GJP7	144.0	1.5106e-42	N/A	N/A
eggNOG-mapper	UHGV-1370995_13	665959.HMPREF1013_00856	113.0	7.24e-31	N/A	N/A
Pfam	UHGV-1370995_13	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1370995_13	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_16	phrog_4973	55.0	0.0000000000000015	N/A	unknown function
UniRef90	UHGV-1370995_16	UniRef90_A0A3D3Y0P8	73.6	0.00000000000000131	DNA-binding protein	N/A
Pfam	UHGV-1370995_16	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1370995_16	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370995_17	UniRef90_A0A3C0NNN3	58.2	0.000000162	HTH psq-type domain-containing protein	N/A
KOfam	UHGV-1370995_18	K06909	120.6	1.9e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1370995_18	phrog_979	137.0	7.19987e-42	terminase large subunit	head and packaging
UniRef90	UHGV-1370995_18	UniRef90_A0A3C0NMI6	595.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1370995_18	1410650.JHWL01000003_gene2834	523.0	0	N/A	N/A
Pfam	UHGV-1370995_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1370995_18	TIGR01445.1	N/A	N/A	intein N-terminal splicing region	N/A
COG	UHGV-1370995_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1370995_18	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_19	phrog_15471	120.7	1.2e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370995_19	UniRef90_A0A396QEH1	185.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1370995_19	1235800.C819_00490	119.0	2.71e-31	HNH endonuclease	N/A
Pfam	UHGV-1370995_19	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-1370995_20	phrog_28563	49.1	0.000000000000086	N/A	unknown function
UniRef90	UHGV-1370995_20	UniRef90_A0A7G9GB56	96.3	1.79e-24	INTEIN_C_TER domain-containing protein	N/A
NCBIFam	UHGV-1370995_20	TIGR01443.1	N/A	N/A	intein C-terminal splicing region	N/A
COG	UHGV-1370995_20	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
PHROG	UHGV-1370995_21	phrog_156	295.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1370995_21	1410650.JHWL01000003_gene2833	495.0	0	N/A	N/A
structural_annotation	UHGV-1370995_21	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-1370995_22	K07584	59.5	7.3e-17	N/A	N/A
PHROG	UHGV-1370995_22	phrog_4478	64.2	1.7e-18	peptidase	other
UniRef90	UHGV-1370995_22	UniRef90_A0A6N9P4C8	54.3	0.000000339	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1370995_22	1123009.AUID01000013_gene1737	48.9	0.00000761	Cysteine protease Prp	N/A
Pfam	UHGV-1370995_22	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1370995_22	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370995_22	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_23	phrog_13908	175.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1370995_23	1410650.JHWL01000003_gene2831	95.9	9.12e-20	N/A	N/A
PHROG	UHGV-1370995_24	phrog_1357	199.3	0	major head protein	head and packaging
UniRef90	UHGV-1370995_24	UniRef90_A0A2V2CFL5	535.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1370995_24	1410650.JHWL01000003_gene2830	265.0	0	N/A	N/A
NCBIFam	UHGV-1370995_24	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1370995_24	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_25	phrog_15239	40.8	0.000000000038	N/A	unknown function
PHROG	UHGV-1370995_26	phrog_12105	108.1	6.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-1370995_26	1519439.JPJG01000060_gene1891	66.6	0.00000000000213	N/A	N/A
PHROG	UHGV-1370995_27	phrog_511	208.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1370995_27	1410650.JHWL01000003_gene2827	259.0	0	N/A	N/A
structural_annotation	UHGV-1370995_27	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1370995_29	1410650.JHWL01000003_gene2815	90.9	1.09e-16	N/A	N/A
eggNOG-mapper	UHGV-1370995_30	693746.OBV_01590	443.0	0	N/A	N/A
Pfam	UHGV-1370995_30	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
PHROG	UHGV-1370995_32	phrog_37900	88.5	2e-27	N/A	unknown function
UniRef90	UHGV-1370995_32	UniRef90_UPI00051B4A1C	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-1370995_32	1519439.JPJG01000060_gene1894	266.0	0	N/A	N/A
Pfam	UHGV-1370995_32	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1370995_32	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1370995_32	PF19789,PF00041,COG3979	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370995_34	UniRef90_R6I1X1	190.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-1370995_34	552398.HMPREF0866_01159	103.0	3.05e-26	N/A	N/A
PHROG	UHGV-1370995_35	phrog_21357	55.8	5.8e-16	endolysin	lysis
UniRef90	UHGV-1370995_35	UniRef90_UPI001BB47323	85.1	1.85e-16	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-1370995_35	693746.OBV_22650	70.5	0.00000000000881	CHAP domain	N/A
Pfam	UHGV-1370995_35	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-1370995_35	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1370995_35	TIGR02594,COG3738	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_36	phrog_1863	66.9	2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1370995_36	748224.HMPREF9436_01412	94.0	2.16e-24	N/A	N/A
PHROG	UHGV-1370995_37	phrog_10091	110.7	1e-32	holin	lysis
UniRef90	UHGV-1370995_37	UniRef90_A0A1Y4RHF4	130.0	7.54e-38	Phage holin	N/A
eggNOG-mapper	UHGV-1370995_37	445975.COLSTE_02144	114.0	2.25e-32	Bacteriophage holin	N/A
Pfam	UHGV-1370995_37	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1370995_37	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1370995_37	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370995_37	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370995_38	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_39	phrog_3754	101.0	1.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-1370995_39	476272.RUMHYD_01764	146.0	7.42688e-44	N/A	N/A
PHROG	UHGV-1370995_40	phrog_21718	92.7	4.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1370995_40	397290.C810_05210	94.4	1.09e-22	N/A	N/A
PHROG	UHGV-1370995_42	phrog_16490	161.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1370995_42	1408437.JNJN01000043_gene803	139.0	7.69e-38	N/A	N/A
PHROG	UHGV-1370995_44	phrog_20016	188.8	0	N/A	unknown function
UniRef90	UHGV-1370995_44	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1370995_44	1226322.HMPREF1545_00077	164.0	0	N/A	N/A
structural_annotation	UHGV-1370995_44	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370995_45	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-1370995_46	K14059	150.7	1.68156e-44	int; integrase	N/A
PHROG	UHGV-1370995_46	phrog_1	156.6	0	integrase	integration and excision
UniRef90	UHGV-1370995_46	UniRef90_R6I1Y0	360.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-1370995_46	1384066.JAGT01000001_gene153	114.0	3.63e-26	Phage integrase family	N/A
Pfam	UHGV-1370995_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1370995_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1370995_46	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
COG	UHGV-1370995_47	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-1370995_47	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1370995_50	UniRef90_A0A8D9PDV2	52.0	0.00000045	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-1370995_50	1392493.JIAB01000001_gene1404	59.3	0.00000000156	repeat protein	N/A
COG	UHGV-1370995_50	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
eggNOG-mapper	UHGV-1370995_53	1378168.N510_01712	54.7	0.00000087	N/A	N/A
structural_annotation	UHGV-1370995_53	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1370995_55	K22300	52.0	0.000000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1370995_55	phrog_8	43.3	0.0000000000088	transcriptional regulator	transcription regulation
UniRef90	UHGV-1370995_55	UniRef90_A0A810PZI0	73.9	3.71e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1370995_55	693746.OBV_25500	62.4	0.00000000000245	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1370995_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1370995_55	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1370995_55	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1370995_56	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_59	phrog_253	100.6	1.8e-29	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370995_59	UniRef90_A0A1C5N4H2	112.0	2.07e-28	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-1370995_59	1410670.JHXF01000015_gene2268	100.0	1.32e-24	Siphovirus Gp157	N/A
Pfam	UHGV-1370995_59	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1370995_59	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_60	phrog_7838	126.4	2.6e-37	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370995_60	UniRef90_A0A8D9UGW3	189.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1370995_60	742767.HMPREF9456_02052	158.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-1370995_60	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_61	phrog_72	45.3	0.00000000000072	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370995_61	UniRef90_A0A2Z4Q9W9	105.0	1.86e-25	NinB	N/A
eggNOG-mapper	UHGV-1370995_61	445972.ANACOL_01825	77.8	0.00000000000000118	N/A	N/A
structural_annotation	UHGV-1370995_61	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_62	phrog_7566	90.7	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-1370995_62	508419.F8J187_9CAUD	99.8	3.09e-26	N/A	N/A
KOfam	UHGV-1370995_63	K03111	118.5	9.9e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1370995_63	phrog_44	119.3	4e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370995_63	UniRef90_R6IDK3	149.0	8.12753e-44	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1370995_63	877414.ATWA01000008_gene232	130.0	5.43e-37	Single-strand binding protein family	N/A
Pfam	UHGV-1370995_63	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1370995_63	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1370995_63	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1370995_63	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1370995_63	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_64	phrog_59	119.4	2e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1370995_64	UniRef90_UPI001EFA3BC2	144.0	2.21999e-40	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-1370995_64	945021.TEH_18310	140.0	5.66e-40	NUMOD4 motif	N/A
PADLOC	UHGV-1370995_64	HEase_00016	101.0	2.6e-31	homing endonuclease	RM
Pfam	UHGV-1370995_64	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-1370995_64	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1370995_64	PF13392,PF20987	N/A	N/A	N/A	N/A
PHROG	UHGV-1370995_65	phrog_16304	64.3	1.9e-18	N/A	unknown function
UniRef90	UHGV-1370995_65	UniRef90_UPI001E560709	104.0	8.55e-24	N/A	N/A
eggNOG-mapper	UHGV-1370995_65	1345695.CLSA_c35700	57.0	0.00000129	DnaD domain protein	N/A
Pfam	UHGV-1370995_65	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1370995_65	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1370995_65	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1370995_66	K24213	46.1	0.00000000000066	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1370995_66	phrog_4433	78.4	1.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-1370995_66	445970.ALIPUT_01592	100.0	1.12e-21	DNA-templated transcription, initiation	N/A
Pfam	UHGV-1370995_66	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1370995_66	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1370995	Yes	42,653	51	100	1
UHGV-0065846	No	35,532	50	82	1
UHGV-1467795	No	35,532	50	82	1
UHGV-1498602	No	25,730	51	60	1
UHGV-1493809	No	25,683	51	59	1
UHGV-0223094	No	24,760	51	57	1