vOTU vOTU-056818

vOTU: vOTU-056818

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-056818
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-00816 → vGENUS-02660 → vSUBGEN-02707 → vOTU-056818
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1371686
Biosample ID	SAMEA2738000
Genome length (bp)	57,785 bps
CheckV completeness	100.00% (Complete)
CDS count	79
CDS density	94.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	65	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1371686_1	phrog_4210	341.5	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371686_1	UniRef90_UPI001D131FEF	60.8	0.000000707	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-1371686_1	475178.B2BTL9_9CAUD	333.0	0	nucleic acid binding	N/A
Pfam	UHGV-1371686_1	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-1371686_1	PF00519,MF_00016,NF011296,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_3	phrog_998	313.6	0	endolysin	lysis
UniRef90	UHGV-1371686_3	UniRef90_A0A139R807	435.0	0	Phage lysin, N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1371686_3	59241.E7DNC3_BPDP1	409.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1371686_3	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1371686_3	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-1371686_3	PF19127,PF05382,TIGR04035,NF008096,COG5263,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_7	phrog_1485	82.3	3.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-1371686_7	1121871.AUAT01000002_gene1368	93.6	3.23e-21	N/A	N/A
Pfam	UHGV-1371686_7	PF07659	N/A	N/A	Nucleotide modification associated domain 1	DUF1599
PHROG	UHGV-1371686_15	phrog_2152	107.0	1.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-1371686_15	1476888.X4YUS5_9CAUD	90.9	1.75e-18	N/A	N/A
Pfam	UHGV-1371686_15	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-1371686_15	PF19880,NF010306	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_20	phrog_4079	131.9	7.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-1371686_20	742733.HMPREF9469_05076	70.9	0.00000000000263	N/A	N/A
PHROG	UHGV-1371686_44	phrog_1494	58.8	8.9e-17	N/A	unknown function
PHROG	UHGV-1371686_50	phrog_998	195.5	0	endolysin	lysis
UniRef90	UHGV-1371686_50	UniRef90_A0A239X196	249.0	0	Prophage LambdaSa1, lysin	N/A
eggNOG-mapper	UHGV-1371686_50	873448.STRPO_0302	242.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1371686_50	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-1371686_50	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1371686_50	PF05382,PF18341,NF033742,COG0791,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_52	phrog_1554	129.6	9.6e-39	N/A	unknown function
UniRef90	UHGV-1371686_52	UniRef90_A0A139Q9H9	122.0	2.51e-31	N/A	N/A
eggNOG-mapper	UHGV-1371686_52	1035189.HMPREF9954_1920	118.0	1.76e-30	N/A	N/A
structural_annotation	UHGV-1371686_52	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_54	phrog_1330	181.4	0	tail protein	tail
eggNOG-mapper	UHGV-1371686_54	1158604.I591_01756	129.0	3.26e-27	Prophage endopeptidase tail	N/A
Pfam	UHGV-1371686_54	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1371686_54	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1371686_54	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1371686_54	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_55	phrog_33	63.0	7.9e-18	distal tail protein Dit	tail
UniRef90	UHGV-1371686_55	UniRef90_A0A1M5Z1G4	76.6	0.000000000000459	Putative phage tail component, N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1371686_55	1408422.JHYF01000021_gene970	69.3	0.0000000000345	tail component	N/A
COG	UHGV-1371686_55	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1371686_55	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_56	phrog_4372	515.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1371686_56	UniRef90_A0A374ABI2	327.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1371686_56	742733.HMPREF9469_05020	333.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1371686_56	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1371686_56	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1371686_56	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1371686_58	phrog_5	42.8	0.000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-1371686_58	UniRef90_A0A4D7AM69	97.8	6.78e-24	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1371686_58	665950.HMPREF1025_02006	95.1	1.3e-23	N/A	N/A
structural_annotation	UHGV-1371686_58	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_59	phrog_4338	126.7	1.2e-37	N/A	unknown function
eggNOG-mapper	UHGV-1371686_59	475178.B2BTI0_9CAUD	95.9	2.57e-22	N/A	N/A
PHROG	UHGV-1371686_60	phrog_4282	110.4	1.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-1371686_60	742733.HMPREF9469_05024	66.6	0.00000000000326	N/A	N/A
PHROG	UHGV-1371686_61	phrog_2645	283.6	0	major tail protein	tail
UniRef90	UHGV-1371686_61	UniRef90_A0A2U8UI58	222.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-1371686_61	742733.HMPREF9469_05026	216.0	0	N/A	N/A
structural_annotation	UHGV-1371686_61	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371686_62	478749.BRYFOR_08519	77.0	6.17e-17	N/A	N/A
structural_annotation	UHGV-1371686_62	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_63	phrog_4270	88.8	4.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-1371686_63	742740.HMPREF9474_02268	82.0	1.2e-18	N/A	N/A
structural_annotation	UHGV-1371686_63	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-1371686_64	K06904	78.7	4.9e-23	N/A	N/A
PHROG	UHGV-1371686_64	phrog_3270	582.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1371686_64	UniRef90_A0A6G5Y7H0	423.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1371686_64	1476888.X4YUP1_9CAUD	387.0	0	peptidase activity	N/A
Pfam	UHGV-1371686_64	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-1371686_64	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-1371686_64	PF05065,PF04586,MF_04119,TIGR01554,TIGR01543,COG4653,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_65	phrog_12	101.6	4.7e-30	portal protein	head and packaging
UniRef90	UHGV-1371686_65	UniRef90_A0A7V7AAV0	338.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1371686_65	411460.RUMTOR_01348	328.0	0	Phage portal protein	N/A
Pfam	UHGV-1371686_65	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-1371686_65	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_66	phrog_9	260.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1371686_66	UniRef90_A0A5C7M263	768.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1371686_66	691965.D4P7C5_9CAUD	766.0	0	Phage Terminase	N/A
Pfam	UHGV-1371686_66	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1371686_66	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-1371686_66	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_67	phrog_7021	52.6	0.0000000000000067	N/A	unknown function
PHROG	UHGV-1371686_68	phrog_4247	46.8	0.00000000000039	virion structural protein	head and packaging
PHROG	UHGV-1371686_69	phrog_4321	143.7	5.19882e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371686_69	UniRef90_X4YEE5	133.0	1.55e-37	Homing endonuclease	N/A
eggNOG-mapper	UHGV-1371686_69	475178.B2BTG9_9CAUD	120.0	3.72e-33	N/A	N/A
PHROG	UHGV-1371686_70	phrog_4259	51.6	0.000000000000014	N/A	unknown function
PHROG	UHGV-1371686_71	phrog_6918	57.3	2.6e-16	holin	lysis
Pfam	UHGV-1371686_71	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1371686_71	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_73	phrog_4303	74.4	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1371686_73	475178.B2BTP0_9CAUD	53.1	0.0000000853	N/A	N/A
PHROG	UHGV-1371686_74	phrog_4291	1019.4	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371686_74	UniRef90_A0A1C5MZZ8	666.0	0	Transposase and inactivated derivatives, IS30 family	N/A
eggNOG-mapper	UHGV-1371686_74	742740.HMPREF9474_02278	647.0	0	N/A	N/A
Pfam	UHGV-1371686_74	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
Pfam	UHGV-1371686_74	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1371686_74	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_75	phrog_3953	160.5	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371686_75	UniRef90_A0A6N9P4D1	170.0	0	N/A	N/A
eggNOG-mapper	UHGV-1371686_75	478749.BRYFOR_08535	166.0	0	N/A	N/A
Pfam	UHGV-1371686_75	PF10926	N/A	N/A	N/A	DUF2800
structural_annotation	UHGV-1371686_75	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
UniRef90	UHGV-1371686_76	UniRef90_A0A140G723	82.4	2.19e-18	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1371686_76	691965.D4P7L5_9CAUD	66.6	0.00000000000073	N/A	N/A
structural_annotation	UHGV-1371686_76	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_77	phrog_62	115.9	1.2e-35	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371686_77	UniRef90_A0A4D7AM36	381.0	0	DEAD/DEAH box helicase family protein	N/A
eggNOG-mapper	UHGV-1371686_77	665950.HMPREF1025_01961	369.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-1371686_77	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1371686_77	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1371686_78	phrog_4787	68.4	4.2e-20	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1371686_78	742733.HMPREF9469_05065	59.7	0.00000000892	N/A	N/A
structural_annotation	UHGV-1371686_78	PF21265,MF_04153	N/A	N/A	N/A	N/A
KOfam	UHGV-1371686_79	K02319	43.4	0.000000000000069	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-1371686_79	phrog_4210	1086.4	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371686_79	UniRef90_A0A6G5Y767	845.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-1371686_79	475178.B2BTL9_9CAUD	775.0	0	nucleic acid binding	N/A
structural_annotation	UHGV-1371686_79	PF00136,PF09250,MF_04100,NF004417,COG0417	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1371686	Yes	57,785	37	100	1
UHGV-1417889	No	57,823	37	100	1
UHGV-1797602	No	12,851	38	23	1
UHGV-1679673	No	12,635	38	22	1