vOTU vOTU-056841

vOTU: vOTU-056841

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-056841
Number of genomes	5
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-02056 → vSUBGEN-04000 → vOTU-056841
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1371830
Biosample ID	N/A
Genome length (bp)	35,436 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	93.79%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	79	Host agreement	92.41
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1371830_2	phrog_3584	116.3	2.3e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1371830_2	537013.CLOSTMETH_02141	77.0	0.0000000000000176	N/A	N/A
structural_annotation	UHGV-1371830_2	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_3	1007096.BAGW01000031_gene129	77.4	1.63e-16	N/A	N/A
structural_annotation	UHGV-1371830_3	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_4	phrog_119	53.2	0.0000000000000043	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371830_4	UniRef90_A0A174XSZ8	121.0	3.52e-33	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1371830_4	1235793.C809_01915	122.0	7.76e-34	HNH endonuclease	N/A
Pfam	UHGV-1371830_4	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1371830_4	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1371830_5	phrog_1066	127.4	5.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-1371830_5	1341151.ASZU01000004_gene265	124.0	3.27e-35	N/A	N/A
structural_annotation	UHGV-1371830_5	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_6	phrog_9	373.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-1371830_6	UniRef90_A0A1Y3W5R1	779.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1371830_6	1203606.HMPREF1526_00981	726.0	0	Terminase	N/A
Pfam	UHGV-1371830_6	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1371830_6	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1371830_6	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1371830_6	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_7	phrog_12	174.7	0	portal protein	head and packaging
UniRef90	UHGV-1371830_7	UniRef90_C4GAS6	502.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1371830_7	626523.GCWU000342_01027	502.0	0	Portal protein	N/A
Pfam	UHGV-1371830_7	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1371830_7	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1371830_7	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1371830_8	K01358	134.0	1.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1371830_8	phrog_94	205.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1371830_8	UniRef90_UPI0018979DC8	207.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1371830_8	1211814.CAPG01000074_gene3455	192.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-1371830_8	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1371830_8	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1371830_8	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_9	phrog_10	185.5	0	major head protein	head and packaging
UniRef90	UHGV-1371830_9	UniRef90_UPI00189AE5FE	422.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1371830_9	1280689.AUJC01000011_gene1521	390.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1371830_9	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1371830_9	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1371830_9	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1371830_9	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_10	phrog_5223	48.4	0.00000000000012	neck protein	connector
UniRef90	UHGV-1371830_10	UniRef90_UPI00157A3953	55.1	0.0000000799	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1371830_10	931626.Awo_c31020	53.5	0.0000000585	N/A	N/A
PHROG	UHGV-1371830_11	phrog_1951	74.0	1.6e-21	head-tail adaptor	connector
UniRef90	UHGV-1371830_11	UniRef90_A0A1F8UNT5	63.2	0.0000000000699	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1371830_11	1094508.Tsac_2422	53.9	0.0000000568	Phage head-tail joining protein	N/A
Pfam	UHGV-1371830_11	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1371830_11	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1371830_11	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1371830_11	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_12	649639.Bcell_2725	60.8	0.000000000143	N/A	N/A
structural_annotation	UHGV-1371830_12	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_13	phrog_5	46.4	0.00000000000096	tail completion or Neck1 protein	connector
Pfam	UHGV-1371830_13	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1371830_13	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_14	phrog_88	80.8	1.8e-23	major tail protein	tail
UniRef90	UHGV-1371830_14	UniRef90_S0FUN2	110.0	2.95e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1371830_14	1195236.CTER_5106	110.0	4.95e-28	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1371830_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1371830_14	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_15	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_16	phrog_13338	116.6	2.1e-34	N/A	unknown function
UniRef90	UHGV-1371830_16	UniRef90_A0A1M6L1P7	191.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1371830_16	1195236.CTER_5104	213.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1371830_16	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1371830_16	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_17	phrog_37549	41.8	0.0000000000007	virion structural protein	head and packaging
UniRef90	UHGV-1371830_17	UniRef90_A0A3D0W045	217.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1371830_17	1195236.CTER_5103	102.0	7.8e-20	N/A	N/A
structural_annotation	UHGV-1371830_17	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_18	phrog_26795	87.8	3.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1371830_18	997296.PB1_16154	134.0	2.32e-33	N/A	N/A
structural_annotation	UHGV-1371830_18	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_19	PF18614,MF_00085,NF003082,COG0361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_20	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_22	phrog_19111	45.1	0.00000000000076	N/A	unknown function
eggNOG-mapper	UHGV-1371830_22	1232428.CAVO010000002_gene2342	65.5	0.00000000105	ATPase involved in DNA repair	N/A
COG	UHGV-1371830_22	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
UniRef90	UHGV-1371830_23	UniRef90_UPI001C012877	199.0	0	leucine-rich repeat protein	N/A
eggNOG-mapper	UHGV-1371830_23	471875.RUMLAC_02240	126.0	6.44e-29	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-1371830_23	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1371830_23	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_23	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_25	411471.SUBVAR_06976	57.8	0.0000000114	N/A	N/A
structural_annotation	UHGV-1371830_25	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_28	phrog_1454	43.2	0.0000000000063	N/A	unknown function
PHROG	UHGV-1371830_29	phrog_13256	64.7	8.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-1371830_29	1226322.HMPREF1545_00166	74.3	1.16e-16	N/A	N/A
PHROG	UHGV-1371830_30	phrog_14030	127.0	1.4e-37	N/A	unknown function
UniRef90	UHGV-1371830_30	UniRef90_R6LL81	247.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1371830_30	1121866.AUGK01000003_gene1444	97.1	2.09e-20	amidase activity	N/A
COG	UHGV-1371830_30	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1371830_31	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_33	1009370.ALO_12461	56.6	0.000000163	N/A	N/A
structural_annotation	UHGV-1371830_33	PF14528,PF05204,MF_01420,TIGR00647,COG3780	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_34	1160721.RBI_I00206	53.9	0.00000000468	N/A	N/A
structural_annotation	UHGV-1371830_34	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_35	1304866.K413DRAFT_4686	75.5	2.02e-17	N/A	N/A
UniRef90	UHGV-1371830_38	UniRef90_A0A8F0WD75	81.3	4.69e-16	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1371830_38	1408437.JNJN01000043_gene801	79.7	3.29e-16	N/A	N/A
KOfam	UHGV-1371830_39	K06400	372.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1371830_39	phrog_95	363.4	0	integrase	integration and excision
UniRef90	UHGV-1371830_39	UniRef90_UPI0019572FB3	519.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1371830_39	1235835.C814_00825	429.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1371830_39	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1371830_39	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1371830_39	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1371830_39	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1371830_39	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1371830_40	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1371830_40	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1371830_41	1121924.ATWH01000011_gene257	97.1	1.69e-19	TM2 domain	N/A
COG	UHGV-1371830_41	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1371830_43	K22300	64.1	2.9e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1371830_43	phrog_8	58.3	1.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1371830_43	UniRef90_A0A1Y4H5B2	121.0	3.36e-33	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1371830_43	748224.HMPREF9436_01444	119.0	1.07e-32	N/A	N/A
PADLOC	UHGV-1371830_43	retron_type_VI_hth_cluster2_1	49.8	0.000000000000075	N/A	Retron
Pfam	UHGV-1371830_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1371830_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1371830_43	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-1371830_46	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1371830_46	PF12728,NF040990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_48	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1371830_49	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-1371830_51	K00390	49.1	3.1e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1371830_51	phrog_424	91.8	5.8e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1371830_51	UniRef90_A0A098AU96	577.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes	N/A
eggNOG-mapper	UHGV-1371830_51	1235800.C819_02256	514.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1371830_51	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1371830_51	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1371830_51	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_53	phrog_3136	125.9	1.2e-37	N/A	unknown function
UniRef90	UHGV-1371830_53	UniRef90_UPI001C00EDA4	128.0	9.28e-35	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1371830_53	1235793.C809_02645	65.5	0.000000000166	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1371830_53	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1371830_53	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1371830_53	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_56	phrog_190	106.9	1.9e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1371830_56	UniRef90_UPI0006C2AC63	121.0	2.44e-32	N/A	N/A
eggNOG-mapper	UHGV-1371830_56	693746.OBV_25250	113.0	4.55e-30	N/A	N/A
Pfam	UHGV-1371830_56	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1371830_56	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1371830_63	phrog_21498	285.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1371830_63	78346.BRUM_0376	253.0	0	DNA binding	N/A
COG	UHGV-1371830_63	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1371830_63	PF05869,TIGR01712	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1371830	Yes	35,436	56	100	1
UHGV-1400033	No	36,396	56	98	1
UHGV-0125520	No	25,142	57	68	1
UHGV-0195002	No	25,126	57	68	1
UHGV-0239906	No	25,063	57	68	1