vOTU vOTU-057061

vOTU: vOTU-057061

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-057061
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00121 → vSUBGEN-28051 → vOTU-057061
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1372764
Biosample ID	N/A
Genome length (bp)	35,517 bps
CheckV completeness	100.00% (Complete)
CDS count	64
CDS density	91.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	238	Host agreement	85.29
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	22	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1372764_2	phrog_937	46.7	0.00000000000048	hemolysin	other
PHROG	UHGV-1372764_3	phrog_443	59.2	1.2e-16	holin	lysis
UniRef90	UHGV-1372764_3	UniRef90_UPI000C088FD8	91.3	6.22e-23	holin	N/A
eggNOG-mapper	UHGV-1372764_3	1469948.JPNB01000002_gene3855	89.4	6.04e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1372764_3	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1372764_3	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1372764_4	K01447	111.6	9.8e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1372764_4	phrog_1794	108.5	8.3e-32	amidase	lysis
UniRef90	UHGV-1372764_4	UniRef90_N1ZHY5	133.0	7.72e-35	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1372764_4	97138.C820_00251	133.0	1.3e-35	Ami_2	N/A
Pfam	UHGV-1372764_4	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1372764_4	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1372764_4	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_5	PF16509,MF_00245,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_7	phrog_16490	53.7	0.0000000000000042	N/A	unknown function
eggNOG-mapper	UHGV-1372764_7	641112.ACOK01000103_gene525	52.4	0.00001	N/A	N/A
structural_annotation	UHGV-1372764_8	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372764_9	UniRef90_A0A8F0WD75	77.0	0.0000000000000149	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1372764_9	1378168.N510_03079	70.9	0.00000000000144	N/A	N/A
KOfam	UHGV-1372764_10	K06400	244.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1372764_10	phrog_95	259.8	0	integrase	integration and excision
UniRef90	UHGV-1372764_10	UniRef90_G9YSD9	412.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-1372764_10	1408437.JNJN01000002_gene1420	405.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1372764_10	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1372764_10	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1372764_10	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1372764_10	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1372764_10	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1372764_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1372764_11	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1372764_11	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1372764_12	UniRef90_A0A7C9LXH3	80.1	0.00000000000115	NINE protein	N/A
eggNOG-mapper	UHGV-1372764_12	1348338.ADILRU_1828	75.1	0.00000000000508	TM2 domain	N/A
COG	UHGV-1372764_12	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1372764_14	K22300	60.4	3.9e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1372764_14	phrog_8	57.6	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1372764_14	UniRef90_A0A1Y4H5B2	116.0	3.15e-31	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1372764_14	748224.HMPREF9436_01444	115.0	2.46e-31	N/A	N/A
PADLOC	UHGV-1372764_14	retron_type_VI_hth_cluster2_1	45.0	0.0000000000022	N/A	Retron
Pfam	UHGV-1372764_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1372764_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1372764_14	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372764_19	642492.Clole_0961	76.6	1.38e-17	N/A	N/A
structural_annotation	UHGV-1372764_19	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_20	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_22	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_26	phrog_424	97.0	2.2e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1372764_26	UniRef90_A0A1Q6JI14	353.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1372764_26	1410628.JNKS01000054_gene544	300.0	0	N/A	N/A
Pfam	UHGV-1372764_26	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1372764_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1372764_26	PF01507,MF_01161,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_27	phrog_3136	136.6	8.19998e-41	N/A	unknown function
UniRef90	UHGV-1372764_27	UniRef90_A0A3D0HBD2	170.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1372764_27	717772.THIAE_09670	52.4	0.00000151	ASCH	N/A
Pfam	UHGV-1372764_27	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1372764_27	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1372764_27	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_28	phrog_38832	84.5	8.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1372764_28	665956.HMPREF1032_03087	93.6	3.57e-22	N/A	N/A
PHROG	UHGV-1372764_30	phrog_38832	64.8	8.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1372764_30	1232443.BAIA02000078_gene48	112.0	8.38e-31	N/A	N/A
PHROG	UHGV-1372764_34	phrog_374	59.6	6.5e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1372764_34	411467.BACCAP_02633	67.8	0.00000000000489	N/A	N/A
PHROG	UHGV-1372764_40	phrog_3584	113.3	1.9e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1372764_40	537013.CLOSTMETH_02141	69.7	0.00000000000902	N/A	N/A
structural_annotation	UHGV-1372764_40	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372764_41	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-1372764_41	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_42	phrog_119	48.6	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1372764_42	UniRef90_A0A174XSZ8	126.0	2.05e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1372764_42	1235793.C809_01915	118.0	9.94e-33	HNH endonuclease	N/A
Pfam	UHGV-1372764_42	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1372764_42	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1372764_43	phrog_1066	128.7	2.1e-38	N/A	unknown function
eggNOG-mapper	UHGV-1372764_43	1341151.ASZU01000004_gene265	126.0	8.07e-36	N/A	N/A
structural_annotation	UHGV-1372764_43	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_44	phrog_9	383.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1372764_44	UniRef90_UPI001D07C789	791.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1372764_44	1203606.HMPREF1526_00981	741.0	0	Terminase	N/A
Pfam	UHGV-1372764_44	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1372764_44	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1372764_44	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1372764_44	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_45	phrog_12	178.4	0	portal protein	head and packaging
UniRef90	UHGV-1372764_45	UniRef90_R8W4B0	505.0	0	HK97 family phage portal protein	N/A
eggNOG-mapper	UHGV-1372764_45	1203606.HMPREF1526_00980	505.0	0	Portal protein	N/A
Pfam	UHGV-1372764_45	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1372764_45	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1372764_45	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1372764_46	K01358	130.9	1.4e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1372764_46	phrog_94	199.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1372764_46	UniRef90_UPI0018979DC8	205.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1372764_46	1280689.AUJC01000011_gene1520	192.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1372764_46	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1372764_46	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1372764_46	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_47	phrog_10	181.6	0	major head protein	head and packaging
UniRef90	UHGV-1372764_47	UniRef90_UPI00189AE5FE	419.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1372764_47	1280689.AUJC01000011_gene1521	398.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1372764_47	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1372764_47	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1372764_47	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1372764_47	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_48	phrog_5223	44.6	0.0000000000019	neck protein	connector
UniRef90	UHGV-1372764_48	UniRef90_UPI001E56ACC2	58.2	0.00000000468	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1372764_48	931626.Awo_c31020	53.1	0.0000000911	N/A	N/A
PHROG	UHGV-1372764_49	phrog_1951	73.9	1.5e-21	head-tail adaptor	connector
UniRef90	UHGV-1372764_49	UniRef90_A0A1F8UNT5	63.5	0.0000000000494	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1372764_49	1094508.Tsac_2422	51.6	0.000000448	Phage head-tail joining protein	N/A
Pfam	UHGV-1372764_49	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1372764_49	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1372764_49	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1372764_49	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372764_50	1487921.DP68_11350	57.4	0.00000000313	N/A	N/A
structural_annotation	UHGV-1372764_50	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_51	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_52	phrog_88	86.4	3.3e-25	major tail protein	tail
UniRef90	UHGV-1372764_52	UniRef90_S0FUN2	114.0	1.33e-28	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1372764_52	1195236.CTER_5106	114.0	2.23e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1372764_52	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1372764_52	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_52	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_53	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_54	phrog_8462	113.7	1.2e-33	tail length tape measure protein	tail
UniRef90	UHGV-1372764_54	UniRef90_A0A174XMM8	168.0	1.98003e-41	Tail tape measure protein TP901 core region	N/A
eggNOG-mapper	UHGV-1372764_54	1195236.CTER_5104	210.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1372764_54	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1372764_54	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_55	phrog_37549	81.6	2.7e-27	virion structural protein	head and packaging
UniRef90	UHGV-1372764_55	UniRef90_A0A3D0W045	230.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1372764_55	1195236.CTER_5103	129.0	1.79e-28	N/A	N/A
structural_annotation	UHGV-1372764_55	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_56	phrog_26795	129.4	1e-38	N/A	unknown function
UniRef90	UHGV-1372764_56	UniRef90_A0A5J6T4K8	134.0	3.01e-32	Minor tail protein	N/A
eggNOG-mapper	UHGV-1372764_56	1382315.JPOI01000001_gene271	135.0	1.22e-33	N/A	N/A
structural_annotation	UHGV-1372764_56	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_57	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_58	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-1372764_60	phrog_10898	283.7	0	N/A	unknown function
UniRef90	UHGV-1372764_60	UniRef90_A0A7U3NJT3	190.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1372764_60	717606.PaecuDRAFT_2136	69.7	0.0000000000618	S-layer homology domain	N/A
COG	UHGV-1372764_60	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-1372764_60	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1372764_61	PF16408,NF033510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1372764_62	1519439.JPJG01000060_gene1892	54.7	0.000000257	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1372764_62	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-1372764_64	1519439.JPJG01000060_gene1895	59.7	0.0000000101	N/A	N/A
structural_annotation	UHGV-1372764_64	PF10618	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1372764	Yes	35,517	58	100	1
UHGV-1467170	No	35,523	58	96	1
UHGV-1420575	No	33,964	58	93	1
UHGV-1405398	No	28,536	58	78	1