vOTU vOTU-057125

vOTU: vOTU-057125

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-057125
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vGENUS-00172 → vSUBGEN-20866 → vOTU-057125
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira eligens_A
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1373021
Biosample ID	N/A
Genome length (bp)	37,756 bps
CheckV completeness	100.00% (Complete)
CDS count	50
CDS density	91.13%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira eligens_A	Total connections	1748	Host agreement	72.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira eligens_A	Total connections	323	Host agreement	86.38

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1373021_2	K07273	119.1	5e-35	acm; lysozyme	N/A
PHROG	UHGV-1373021_2	phrog_291	95.6	6.5e-28	endolysin	lysis
UniRef90	UHGV-1373021_2	UniRef90_A0A356C4L5	738.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1373021_2	515620.EUBELI_01316	166.0	4.2039e-45	Glycoside Hydrolase Family 25-like lysozyme endolysin	N/A
Pfam	UHGV-1373021_2	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1373021_2	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1373021_2	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_3	phrog_199	71.4	1.1e-20	holin	lysis
UniRef90	UHGV-1373021_3	UniRef90_A0A356C4Q2	240.0	0	Holin	N/A
eggNOG-mapper	UHGV-1373021_3	483218.BACPEC_01140	211.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1373021_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1373021_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1373021_3	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1373021_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_5	phrog_2566	46.1	0.00000000000074	N/A	unknown function
PHROG	UHGV-1373021_6	phrog_6616	163.1	0	tail protein	tail
UniRef90	UHGV-1373021_6	UniRef90_A0A8D9PGP3	677.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1373021_6	1232453.BAIF02000058_gene1641	270.0	0	Phage minor structural protein	N/A
COG	UHGV-1373021_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1373021_6	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_7	phrog_1401	64.2	1.9e-18	N/A	unknown function
UniRef90	UHGV-1373021_7	UniRef90_UPI0007099B7A	68.9	0.00000000000244	N/A	N/A
eggNOG-mapper	UHGV-1373021_7	1294142.CINTURNW_1705	57.8	0.00000000841	N/A	N/A
structural_annotation	UHGV-1373021_7	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_8	phrog_1194	82.4	4.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-1373021_8	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-1373021_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_9	phrog_1535	281.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1373021_9	UniRef90_R6TDK7	358.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-1373021_9	33035.JPJF01000093_gene2243	358.0	0	phage tail tape measure protein	N/A
COG	UHGV-1373021_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1373021_9	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_10	phrog_8355	105.1	2.1e-31	N/A	unknown function
UniRef90	UHGV-1373021_10	UniRef90_UPI0006BBA9AA	126.0	7.01e-36	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1373021_10	1151292.QEW_2424	103.0	4.06e-28	N/A	N/A
PHROG	UHGV-1373021_11	phrog_8300	67.4	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1373021_11	1151292.QEW_2425	60.8	0.000000000154	N/A	N/A
structural_annotation	UHGV-1373021_11	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_12	phrog_820	117.3	8.7e-35	major tail protein	tail
UniRef90	UHGV-1373021_12	UniRef90_T3DDR1	172.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1373021_12	1151292.QEW_2426	172.0	0	N/A	N/A
structural_annotation	UHGV-1373021_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_13	phrog_2595	80.3	2.1e-23	head-tail connector protein	connector
UniRef90	UHGV-1373021_13	UniRef90_UPI001D068DAC	137.0	6.52e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-1373021_13	742740.HMPREF9474_03510	125.0	5.53e-35	N/A	N/A
Pfam	UHGV-1373021_13	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1373021_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_14	phrog_556	59.6	4.5e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-1373021_14	742740.HMPREF9474_03509	142.0	8.75952e-42	N/A	N/A
structural_annotation	UHGV-1373021_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_15	phrog_8710	126.1	1.2e-37	N/A	unknown function
eggNOG-mapper	UHGV-1373021_15	33035.JPJF01000093_gene2249	109.0	8.48e-30	N/A	N/A
structural_annotation	UHGV-1373021_15	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_16	phrog_541	66.6	3.6e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1373021_16	483218.BACPEC_01153	145.0	2.0459e-43	N/A	N/A
PHROG	UHGV-1373021_18	phrog_422	211.1	0	major head protein	head and packaging
UniRef90	UHGV-1373021_18	UniRef90_W0U896	209.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1373021_18	1121947.AUHK01000002_gene935	217.0	0	N/A	N/A
structural_annotation	UHGV-1373021_18	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_19	phrog_2303	132.6	3.2e-39	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1373021_19	1304866.K413DRAFT_0806	140.0	6.29e-39	N/A	N/A
PHROG	UHGV-1373021_21	phrog_581	249.5	0	minor head protein	head and packaging
UniRef90	UHGV-1373021_21	UniRef90_A0A413YU28	676.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1373021_21	33035.JPJF01000093_gene2255	449.0	0	N/A	N/A
Pfam	UHGV-1373021_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1373021_21	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1373021_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_22	phrog_533	286.1	0	portal protein	head and packaging
UniRef90	UHGV-1373021_22	UniRef90_A0A413YU90	955.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1373021_22	33035.JPJF01000093_gene2257	548.0	0	N/A	N/A
structural_annotation	UHGV-1373021_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1373021_23	K06909	94.9	9.9e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1373021_23	phrog_2	70.0	4.9e-20	terminase large subunit	head and packaging
UniRef90	UHGV-1373021_23	UniRef90_A0A413YU24	963.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1373021_23	1294142.CINTURNW_1023	518.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1373021_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1373021_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1373021_23	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1373021_24	K07474	149.6	2.94273e-44	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1373021_24	phrog_51	159.9	0	terminase small subunit	head and packaging
UniRef90	UHGV-1373021_24	UniRef90_A0A413YU49	340.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1373021_24	1499683.CCFF01000014_gene3916	148.0	1.98984e-42	Terminase small subunit	N/A
Pfam	UHGV-1373021_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1373021_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1373021_24	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_25	phrog_36	63.7	3.6e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1373021_25	397290.C810_01391	100.0	7.49e-25	N/A	N/A
structural_annotation	UHGV-1373021_25	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_26	phrog_874	163.4	0	N/A	unknown function
UniRef90	UHGV-1373021_26	UniRef90_A0A6N7W7Q7	207.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1373021_26	411468.CLOSCI_00298	186.0	0	N/A	N/A
structural_annotation	UHGV-1373021_26	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_27	phrog_20593	68.0	8.7e-20	N/A	unknown function
AcrCatalog	UHGV-1373021_27	cluster_27421	39.7	0.000000289	NA	N/A
PHROG	UHGV-1373021_28	phrog_2118	125.2	4.9e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373021_28	UniRef90_R5ZJF1	285.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1373021_28	610130.Closa_0730	128.0	1.63e-36	HNH endonuclease	N/A
Pfam	UHGV-1373021_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1373021_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1373021_32	K00558	232.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1373021_32	phrog_116	268.6	0	DNA methyltransferase	other
UniRef90	UHGV-1373021_32	UniRef90_A0A356C6K5	897.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1373021_32	1235800.C819_02255	664.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1373021_32	MTase_II_00020	115.7	2e-38	Type II methyltransferase	RM
Pfam	UHGV-1373021_32	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1373021_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1373021_32	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1373021_33	K07319	90.2	1.8e-26	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1373021_33	phrog_16	223.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373021_33	UniRef90_A0A356C6C6	1491.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-1373021_33	1298920.KI911353_gene2709	1388.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-1373021_33	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-1373021_33	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1373021_33	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1373021_33	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_35	phrog_7566	96.1	2.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1373021_35	1235800.C819_00511	95.5	1.89e-22	N/A	N/A
structural_annotation	UHGV-1373021_36	PF02179,NF011863	N/A	N/A	N/A	N/A
KOfam	UHGV-1373021_37	K03469	68.1	1.7e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1373021_37	phrog_531	64.8	1.4e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373021_37	UniRef90_A0A413YU26	271.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373021_37	1121447.JONL01000002_gene2134	76.3	0.00000000000000173	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1373021_37	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1373021_37	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1373021_37	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_38	phrog_3584	241.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1373021_38	UniRef90_A0A4P8IFK4	346.0	0	N/A	N/A
eggNOG-mapper	UHGV-1373021_38	742741.HMPREF9475_00404	297.0	0	N/A	N/A
structural_annotation	UHGV-1373021_38	PF21578	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373021_39	UniRef90_A0A356C6A4	154.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-1373021_39	318464.IO99_13850	65.5	0.000000000000379	Helix-turn-helix domain	N/A
Pfam	UHGV-1373021_39	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1373021_39	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1373021_39	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_44	phrog_3	40.2	0.00000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-1373021_44	UniRef90_UPI000E7391FB	71.6	0.00000000000000706	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1373021_44	1321782.HMPREF1986_02244	59.3	0.000000000105	Helix-turn-helix domain	N/A
Pfam	UHGV-1373021_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1373021_44	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-1373021_45	phrog_2967	57.4	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1373021_45	UniRef90_R6A4U7	251.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1373021_45	1235798.C817_00620	97.1	3.8e-24	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1373021_45	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1373021_45	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1373021_45	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_46	phrog_20886	53.7	0.0000000000000025	N/A	unknown function
UniRef90	UHGV-1373021_46	UniRef90_UPI0013E038FD	53.1	0.000000137	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1373021_46	861450.HMPREF0080_02020	47.8	0.00000413	N/A	N/A
structural_annotation	UHGV-1373021_46	PF06114	N/A	N/A	N/A	N/A
UniRef90	UHGV-1373021_47	UniRef90_UPI0006C337A0	230.0	0	tetratricopeptide repeat protein	N/A
eggNOG-mapper	UHGV-1373021_47	2754.EH55_11435	166.0	1.079e-43	cell adhesion	N/A
COG	UHGV-1373021_47	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_48	phrog_27728	52.3	0.0000000000000081	N/A	unknown function
UniRef90	UHGV-1373021_48	UniRef90_A0A0N9YRJ3	64.7	0.0000000000873	FlgT_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1373021_48	875454.BAEW01000002_gene513	70.1	0.000000000000101	N/A	N/A
AcrCatalog	UHGV-1373021_48	cluster_25916	64.7	4.05e-16	NA	N/A
structural_annotation	UHGV-1373021_48	PF16538	N/A	N/A	N/A	N/A
PHROG	UHGV-1373021_49	phrog_2158	180.6	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1373021_49	UniRef90_A0A1M4WG46	341.0	0	Abortive infection bacteriophage resistance protein	N/A
eggNOG-mapper	UHGV-1373021_49	875454.BAEW01000002_gene514	204.0	0	Abi-like protein	N/A
PADLOC	UHGV-1373021_49	AbiD	118.9	8.7e-35	AbiD	Abi
Pfam	UHGV-1373021_49	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1373021_49	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
KOfam	UHGV-1373021_50	K14059	218.8	0	int; integrase	N/A
PHROG	UHGV-1373021_50	phrog_1	206.6	0	integrase	integration and excision
UniRef90	UHGV-1373021_50	UniRef90_R6AKI6	811.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-1373021_50	536233.CLO_0855	391.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-1373021_50	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1373021_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1373021_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1373021_50	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1373021	Yes	37,756	38	100	1
UHGV-0067210	No	37,553	38	98	1
UHGV-1542831	No	29,250	39	76	1
UHGV-1462352	No	20,660	39	54	1
UHGV-1596100	No	18,092	39	47	1
UHGV-0150800	No	15,521	40	40	1
UHGV-1774958	No	15,521	40	40	1
UHGV-1701013	No	14,388	39	36	1