vOTU vOTU-057624

vOTU: vOTU-057624

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-057624
Number of genomes	7
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00121 → vSUBGEN-32925 → vOTU-057624
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1375315
Biosample ID	SAMN02334065
Genome length (bp)	37,252 bps
CheckV completeness	100.00% (Complete)
CDS count	68
CDS density	94.07%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	216	Host agreement	87.5
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1375315_1	UniRef90_A0A7M1RTM1	85.1	1.2e-17	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1375315_1	1378168.N510_03079	71.2	0.000000000000983	N/A	N/A
UniRef90	UHGV-1375315_5	UniRef90_UPI00164AED9E	62.0	0.000000000382	helix-turn-helix domain-containing protein	N/A
COG	UHGV-1375315_5	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-1375315_5	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-1375315_8	UniRef90_A0A358M2Y7	219.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1375315_8	525254.HMPREF0072_1273	220.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1375315_8	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1375315_8	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_9	phrog_6918	99.3	2.4e-29	holin	lysis
UniRef90	UHGV-1375315_9	UniRef90_A0A316QCY7	102.0	2.45e-26	Holin	N/A
eggNOG-mapper	UHGV-1375315_9	1297617.JPJD01000020_gene301	101.0	1.71e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1375315_9	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1375315_9	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_15	phrog_37900	303.1	0	N/A	unknown function
UniRef90	UHGV-1375315_15	UniRef90_UPI001C3EA4DF	399.0	0	N/A	N/A
eggNOG-mapper	UHGV-1375315_15	552398.HMPREF0866_03098	232.0	0	N/A	N/A
Pfam	UHGV-1375315_15	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1375315_15	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
PHROG	UHGV-1375315_16	phrog_19111	41.7	2.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-1375315_16	411471.SUBVAR_06929	298.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1375315_16	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-1375315_17	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_18	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_19	phrog_26795	131.2	2.6e-39	N/A	unknown function
UniRef90	UHGV-1375315_19	UniRef90_A0A5J6T4K8	139.0	5.86e-34	Minor tail protein	N/A
eggNOG-mapper	UHGV-1375315_19	1195236.CTER_5102	145.0	1.66e-37	N/A	N/A
structural_annotation	UHGV-1375315_19	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_20	phrog_37549	80.4	6.3e-27	virion structural protein	head and packaging
UniRef90	UHGV-1375315_20	UniRef90_A0A3D0W045	230.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1375315_20	1195236.CTER_5103	133.0	7.26e-30	N/A	N/A
structural_annotation	UHGV-1375315_20	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_21	phrog_33680	140.6	6.60012e-42	N/A	unknown function
UniRef90	UHGV-1375315_21	UniRef90_A0A1M6L1P7	257.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1375315_21	1195236.CTER_5104	263.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1375315_21	PF08614	N/A	N/A	Autophagy protein 16 (ATG16)	ATG16
COG	UHGV-1375315_21	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1375315_21	TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_22	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_23	phrog_88	85.6	6.1e-25	major tail protein	tail
UniRef90	UHGV-1375315_23	UniRef90_S0FUN2	114.0	9.42e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1375315_23	1195236.CTER_5106	114.0	1.58e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1375315_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1375315_23	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_23	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_24	phrog_5	41.7	0.000000000029	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1375315_24	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1375315_25	1487921.DP68_11350	61.2	0.000000000099	N/A	N/A
structural_annotation	UHGV-1375315_25	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_26	phrog_1951	76.8	2.2e-22	head-tail adaptor	connector
UniRef90	UHGV-1375315_26	UniRef90_W2E6H3	69.7	0.000000000000226	Phage-related protein	N/A
eggNOG-mapper	UHGV-1375315_26	1094508.Tsac_2422	54.7	0.0000000285	Phage head-tail joining protein	N/A
Pfam	UHGV-1375315_26	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1375315_26	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1375315_26	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1375315_26	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_27	phrog_5223	44.1	0.0000000000028	neck protein	connector
UniRef90	UHGV-1375315_27	UniRef90_E6MGY0	57.0	0.0000000157	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1375315_27	887929.HMP0721_1264	57.0	0.00000000263	N/A	N/A
PHROG	UHGV-1375315_28	phrog_10	178.9	0	major head protein	head and packaging
UniRef90	UHGV-1375315_28	UniRef90_UPI00189AE5FE	397.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1375315_28	1280689.AUJC01000011_gene1521	370.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1375315_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1375315_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1375315_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1375315_28	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1375315_29	K01358	131.1	1.3e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1375315_29	phrog_94	194.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1375315_29	UniRef90_A0A355BJ21	204.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1375315_29	1140001.I571_01745	182.0	0	Clp protease	N/A
Pfam	UHGV-1375315_29	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1375315_29	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1375315_29	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_30	phrog_12	180.1	0	portal protein	head and packaging
UniRef90	UHGV-1375315_30	UniRef90_C4GAS6	504.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1375315_30	626523.GCWU000342_01027	504.0	0	Portal protein	N/A
Pfam	UHGV-1375315_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1375315_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1375315_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_31	phrog_9	382.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1375315_31	UniRef90_A0A1Y3W5R1	789.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1375315_31	1203606.HMPREF1526_00981	740.0	0	Terminase	N/A
Pfam	UHGV-1375315_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1375315_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1375315_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1375315_31	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_32	phrog_1066	124.9	3.3e-37	N/A	unknown function
eggNOG-mapper	UHGV-1375315_32	1341151.ASZU01000004_gene265	124.0	4.64e-35	N/A	N/A
structural_annotation	UHGV-1375315_32	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_33	phrog_119	49.8	0.000000000000048	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375315_33	UniRef90_A0A174XSZ8	125.0	5.87e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1375315_33	1235793.C809_01915	120.0	1.73e-33	HNH endonuclease	N/A
COG	UHGV-1375315_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-1375315_34	1297617.JPJD01000059_gene2640	76.6	5.09e-16	N/A	N/A
structural_annotation	UHGV-1375315_34	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_35	phrog_3584	123.4	1.7e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1375315_35	537013.CLOSTMETH_02141	67.0	0.0000000000873	N/A	N/A
structural_annotation	UHGV-1375315_35	PF21578,MF_00360	N/A	N/A	N/A	N/A
KOfam	UHGV-1375315_36	K00571	113.8	2.1e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1375315_36	phrog_23224	142.7	4.2039e-43	DNA methyltransferase	other
UniRef90	UHGV-1375315_36	UniRef90_A0A1C6JAJ2	277.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1375315_36	981335.G4W934_9CAUD	247.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-1375315_36	MTase_II_00172	116.6	3e-34	Type II methyltransferase	RM
Pfam	UHGV-1375315_36	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1375315_36	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_41	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_43	phrog_190	110.0	2.3e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375315_43	UniRef90_A0A6N9P911	131.0	3.8e-36	N/A	N/A
eggNOG-mapper	UHGV-1375315_43	1226322.HMPREF1545_00295	113.0	6.51e-30	N/A	N/A
Pfam	UHGV-1375315_43	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1375315_43	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_46	phrog_38832	41.0	0.000000000022	N/A	unknown function
eggNOG-mapper	UHGV-1375315_46	445972.ANACOL_00165	55.5	0.000000331	N/A	N/A
PHROG	UHGV-1375315_47	phrog_38832	65.3	6.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1375315_47	665956.HMPREF1032_00143	73.6	0.0000000000000659	N/A	N/A
PHROG	UHGV-1375315_48	phrog_355	59.3	7.2e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1375315_48	UniRef90_A0A413FXK8	106.0	5.67e-28	N/A	N/A
eggNOG-mapper	UHGV-1375315_48	573061.Clocel_3558	74.3	5.4e-16	N/A	N/A
Pfam	UHGV-1375315_48	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1375315_48	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1375315_48	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_49	phrog_3136	129.6	8.7e-39	N/A	unknown function
UniRef90	UHGV-1375315_49	UniRef90_UPI001C00EDA4	124.0	2.45e-33	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1375315_49	1235793.C809_02645	63.5	0.000000000912	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1375315_49	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1375315_49	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1375315_49	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_50	phrog_8684	70.6	1.4e-21	N/A	unknown function
UniRef90	UHGV-1375315_50	UniRef90_A0A1C6K9I9	128.0	3.49e-35	YopX protein	N/A
eggNOG-mapper	UHGV-1375315_50	1226322.HMPREF1545_00036	68.2	0.000000000000991	YopX protein	N/A
Pfam	UHGV-1375315_50	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1375315_50	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1375315_50	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1375315_52	K00390	98.3	9.1e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1375315_52	phrog_424	123.9	9.6e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1375315_52	UniRef90_UPI001D087498	426.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1375315_52	1408437.JNJN01000032_gene2312	328.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-1375315_52	BrxP_00001	58.4	9.2e-18	BrxP	BREX
Pfam	UHGV-1375315_52	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1375315_52	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1375315_52	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_56	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_57	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1375315_60	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-1375315_63	K22300	54.7	0.0000000000000026	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1375315_63	phrog_8	51.8	0.0000000000000091	transcriptional regulator	transcription regulation
UniRef90	UHGV-1375315_63	UniRef90_A0A2U1BEG8	122.0	1.16e-33	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1375315_63	445972.ANACOL_03315	110.0	1.14e-29	N/A	N/A
PADLOC	UHGV-1375315_63	retron_type_VI_hth_cluster2_1	43.1	0.0000000000094	N/A	Retron
Pfam	UHGV-1375315_63	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1375315_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1375315_63	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1375315_66	phrog_10292	78.1	5.2e-23	N/A	unknown function
UniRef90	UHGV-1375315_66	UniRef90_A0A416W984	104.0	3.05e-26	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1375315_66	537013.CLOSTMETH_02269	84.0	1.76e-18	TM2 domain	N/A
Pfam	UHGV-1375315_66	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1375315_66	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1375315_66	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1375315_67	K22299	47.6	0.00000000000037	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1375315_67	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1375315_67	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1375315_67	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1375315_68	K06400	255.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1375315_68	phrog_95	263.7	0	integrase	integration and excision
UniRef90	UHGV-1375315_68	UniRef90_G9YSD9	407.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-1375315_68	1408437.JNJN01000002_gene1420	400.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1375315_68	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1375315_68	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1375315_68	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1375315_68	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1375315_68	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1375315	Yes	37,252	58	100	1
UHGV-1402470	No	37,341	58	100	1
UHGV-1446723	No	37,147	58	100	1
UHGV-1445792	No	37,082	58	100	1
UHGV-1703920	No	14,372	58	39	1
UHGV-1701328	No	14,413	58	39	1
UHGV-1628496	No	10,612	60	29	1