vOTU vOTU-057901

vOTU: vOTU-057901

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-057901
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-02835 → vGENUS-09620 → vSUBGEN-11583 → vOTU-057901
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-841 → CAG-841 sp900544285
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0052048
Biosample ID	N/A
Genome length (bp)	26,738 bps
CheckV completeness	100.00% (Complete)
CDS count	42
CDS density	91.27%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → CAG-841 → CAG-841 sp900544285	Total connections	11	Host agreement	72.73
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0052048_1	397291.C804_00979	90.1	6.69e-20	N/A	N/A
PHROG	UHGV-0052048_2	phrog_19789	41.5	0.00000000000039	N/A	unknown function
eggNOG-mapper	UHGV-0052048_2	1123278.KB893581_gene1049	70.1	0.000000000000127	N/A	N/A
PHROG	UHGV-0052048_4	phrog_5968	141.9	3.59994e-42	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052048_4	UniRef90_UPI0015602129	218.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_4	558169.AGAV01000001_gene3326	201.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0052048_4	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0052048_4	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0052048_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0052048_4	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052048_5	PF12990	N/A	N/A	N/A	N/A
KOfam	UHGV-0052048_6	K03111	147.2	1.69557e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0052048_6	phrog_44	148.7	3.22299e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052048_6	UniRef90_A0A316QA23	160.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0052048_6	445972.ANACOL_01827	129.0	1.59e-36	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0052048_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0052048_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0052048_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0052048_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0052048_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_7	phrog_659	193.4	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052048_7	UniRef90_A0A843GXL3	193.0	0	N/A	N/A
eggNOG-mapper	UHGV-0052048_7	1507.HMPREF0262_00431	184.0	0	N/A	N/A
Pfam	UHGV-0052048_7	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0052048_7	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_12	phrog_1129	45.1	0.0000000000012	holin	lysis
eggNOG-mapper	UHGV-0052048_12	1226322.HMPREF1545_00069	57.0	0.00000000225	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0052048_12	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0052048_12	PF06946	N/A	N/A	N/A	N/A
Pfam	UHGV-0052048_13	PF18902	N/A	N/A	N/A	DUF5658
structural_annotation	UHGV-0052048_13	PF18902	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0052048_15	411902.CLOBOL_00124	65.1	0.0000000495	N/A	N/A
PHROG	UHGV-0052048_16	phrog_1194	55.2	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0052048_16	1120998.AUFC01000030_gene2246	68.9	0.00000000000282	N/A	N/A
structural_annotation	UHGV-0052048_16	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_17	phrog_9959	96.1	1.8e-28	tail length tape measure protein	tail
UniRef90	UHGV-0052048_17	UniRef90_A0A4R8ICR0	153.0	4.96e-37	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_17	1492737.FEM08_12070	164.0	2.37002e-41	tape measure	N/A
Pfam	UHGV-0052048_17	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0052048_17	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0052048_17	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0052048_21	phrog_885	89.6	3.3e-26	major tail protein	tail
UniRef90	UHGV-0052048_21	UniRef90_A0A843J9F0	197.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_21	1504822.CCNO01000012_gene492	206.0	0	N/A	N/A
structural_annotation	UHGV-0052048_21	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_22	phrog_17405	41.0	0.000000000031	head protein	head and packaging
structural_annotation	UHGV-0052048_22	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_23	phrog_17977	83.0	2.7e-24	N/A	unknown function
UniRef90	UHGV-0052048_23	UniRef90_UPI00141211AB	127.0	9.61e-36	head-tail adaptor protein	N/A
Pfam	UHGV-0052048_23	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0052048_23	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_25	phrog_267	193.1	0	major head protein	head and packaging
UniRef90	UHGV-0052048_25	UniRef90_F8UBM2	268.0	0	p22 coat protein	N/A
eggNOG-mapper	UHGV-0052048_25	673376.F2VHW8_9CAUD	268.0	0	viral capsid	N/A
Pfam	UHGV-0052048_25	PF19821	N/A	N/A	Phage capsid protein	Phage_capsid_2
structural_annotation	UHGV-0052048_25	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0052048_26	UniRef90_A0A6B9SU02	134.0	4.75e-36	Fibronectin autolysin	N/A
structural_annotation	UHGV-0052048_26	PF06810	N/A	N/A	N/A	N/A
UniRef90	UHGV-0052048_27	UniRef90_UPI0018AA0B5A	62.4	0.000000000105	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0052048_27	1504822.CCNO01000013_gene284	55.5	0.00000000511	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0052048_27	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
PHROG	UHGV-0052048_28	phrog_595	92.4	6.5e-27	head maturation protease	head and packaging
UniRef90	UHGV-0052048_28	UniRef90_A0A3D2MUF2	224.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_28	1111135.HMPREF1248_0663	153.0	3.86e-39	cell adhesion	N/A
Pfam	UHGV-0052048_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0052048_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052048_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_30	phrog_64	161.8	0	portal protein	head and packaging
UniRef90	UHGV-0052048_30	UniRef90_UPI0018A8A301	507.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0052048_30	673376.F2VHW1_9CAUD	226.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0052048_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0052048_30	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_31	phrog_38	159.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0052048_31	UniRef90_UPI001C397E52	441.0	0	Terminase family protein	N/A
eggNOG-mapper	UHGV-0052048_31	742722.HMPREF9463_00238	452.0	0	N/A	N/A
structural_annotation	UHGV-0052048_31	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_32	phrog_704	170.6	0	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052048_32	UniRef90_A0A024QBB4	225.0	0	Myb-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_32	1462526.BN990_01842	225.0	0	N/A	N/A
structural_annotation	UHGV-0052048_32	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_33	phrog_2412	42.8	0.0000000000027	N/A	unknown function
UniRef90	UHGV-0052048_33	UniRef90_UPI000427CABE	52.0	0.00000547	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_33	563192.HMPREF0179_00168	65.9	0.00000000000308	N/A	N/A
Pfam	UHGV-0052048_33	PF18932	N/A	N/A	N/A	DUF5681
PHROG	UHGV-0052048_34	phrog_16866	187.1	0	N/A	unknown function
UniRef90	UHGV-0052048_34	UniRef90_A0A518LP53	183.0	0	MgsA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_34	435590.BVU_2840	184.0	0	atpase related to the helicase subunit of the holliday junction resolvase	N/A
COG	UHGV-0052048_34	COG2256	N/A	N/A	Replication-associated recombination protein RarA (DNA-dependent ATPase)	N/A
structural_annotation	UHGV-0052048_34	PF12002	N/A	N/A	N/A	N/A
KOfam	UHGV-0052048_35	K00012	109.5	3e-32	UGDH, ugd; UDPglucose 6-dehydrogenase [EC:1.1.1.22]	N/A
PHROG	UHGV-0052048_35	phrog_9148	81.5	2.5e-24	UDP-glucose dehydrogenase	other
UniRef90	UHGV-0052048_35	UniRef90_A0A6P1Y3C8	146.0	1.44e-39	UDPG_MGDP_dh domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_35	182217.HCW_07015	132.0	9.99e-35	Belongs to the UDP-glucose GDP-mannose dehydrogenase family	N/A
Pfam	UHGV-0052048_35	PF00984	N/A	N/A	UDP-glucose/GDP-mannose dehydrogenase family, central domain	UDPG_MGDP_dh
COG	UHGV-0052048_35	COG1004	N/A	N/A	UDP-glucose 6-dehydrogenase	N/A
structural_annotation	UHGV-0052048_35	PF00984,PF03446,MF_02029,NF041297,COG1004	N/A	N/A	N/A	N/A
PHROG	UHGV-0052048_36	phrog_842	68.2	1.4e-19	beta-glucosyl-HMC-alpha-glucosyltransferase	other
eggNOG-mapper	UHGV-0052048_36	761193.Runsl_0329	105.0	2.45e-24	N/A	N/A
Pfam	UHGV-0052048_36	PF20691	N/A	N/A	TET-Associated Glycosyltransferase	TAGT
structural_annotation	UHGV-0052048_36	PF20691,MF_00057,NF038299,COG1216	N/A	N/A	N/A	N/A
KOfam	UHGV-0052048_37	K03497	58.0	2.1e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0052048_37	phrog_620	139.7	1.49995e-41	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052048_37	UniRef90_A0A810PZK9	160.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0052048_37	1035196.HMPREF9998_01728	114.0	4.22e-27	N/A	N/A
PADLOC	UHGV-0052048_37	MTase_II_00015	80.5	2.9e-23	Type II methyltransferase	RM
Pfam	UHGV-0052048_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0052048_37	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-0052048_38	phrog_190	128.2	5.3e-38	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052048_38	UniRef90_UPI0005288167	120.0	8.75e-33	N/A	N/A
eggNOG-mapper	UHGV-0052048_38	742767.HMPREF9456_03412	102.0	8.62e-27	N/A	N/A
Pfam	UHGV-0052048_38	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0052048_38	PF06356	N/A	N/A	N/A	N/A
Pfam	UHGV-0052048_42	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0052048	Yes	26,738	44	100	1
UHGV-1376637	No	26,738	44	100	1
UHGV-1376636	No	26,684	44	100	1
UHGV-0371620	No	26,394	44	99	1
UHGV-1447244	No	13,898	45	52	1