vOTU vOTU-058377

vOTU: vOTU-058377

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-058377
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vSUBFAM-02348 → vGENUS-02800 → vSUBGEN-09314 → vOTU-058377
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → Borkfalkiaceae → UBA10281 → UBA10281 sp900767815
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1443719
Biosample ID	SAMEA3664893
Genome length (bp)	28,881 bps
CheckV completeness	100.00% (Complete)
CDS count	41
CDS density	92.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → Borkfalkiaceae → UBA10281 → UBA10281 sp900767815	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1443719_5	PF07041	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443719_6	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443719_7	PF09097,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443719_10	UniRef90_A0A2Z4GU91	84.7	2.72e-19	Minor capsid protein	N/A
structural_annotation	UHGV-1443719_11	PF07405,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443719_13	UniRef90_A0A2Z4GUC0	597.0	0	Chitobiase/beta-hexosaminidase	N/A
eggNOG-mapper	UHGV-1443719_13	1408324.JNJK01000056_gene3661	71.6	0.000000000376	Pilus formation protein N terminal region	N/A
Pfam	UHGV-1443719_13	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
COG	UHGV-1443719_13	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-1443719_13	PF05065,PF13620,MF_04119,TIGR04387,TIGR04134,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_15	phrog_581	90.1	3.3e-26	minor head protein	head and packaging
UniRef90	UHGV-1443719_15	UniRef90_A0A2Z4GUI4	230.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1443719_15	997296.PB1_16234	62.4	0.0000000694	Phage minor capsid protein 2	N/A
Pfam	UHGV-1443719_15	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1443719_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443719_15	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_16	phrog_533	112.4	2.9e-33	portal protein	head and packaging
UniRef90	UHGV-1443719_16	UniRef90_A0A2Z4GUT7	593.0	0	Portal protein	N/A
structural_annotation	UHGV-1443719_16	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1443719_17	K06909	124.2	1.4e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1443719_17	phrog_2	68.3	1.6e-19	terminase large subunit	head and packaging
UniRef90	UHGV-1443719_17	UniRef90_A0A2Z4GUK2	309.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-1443719_17	66692.ABC2839	70.9	0.000000000231	Terminase RNAseH like domain	N/A
Pfam	UHGV-1443719_17	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1443719_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1443719_17	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-1443719_18	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1443719_18	PF02796,NF040785	N/A	N/A	N/A	N/A
KOfam	UHGV-1443719_21	K03111	132.9	3.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1443719_21	phrog_44	133.0	2.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443719_21	UniRef90_A0A2V2ET02	140.0	2.06001e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1443719_21	1042163.BRLA_c031440	111.0	1.41e-29	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1443719_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1443719_21	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1443719_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1443719_21	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1443719_21	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_23	phrog_4897	116.0	4.6e-34	kinase	other
UniRef90	UHGV-1443719_23	UniRef90_A0A418MBD6	102.0	2.89e-27	N/A	N/A
eggNOG-mapper	UHGV-1443719_23	560178.B6D7L1_9CAUD	81.3	1e-17	N/A	N/A
Pfam	UHGV-1443719_23	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1443719_23	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_24	phrog_398	208.1	0	N/A	unknown function
UniRef90	UHGV-1443719_24	UniRef90_UPI00137B6F1E	219.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-1443719_24	1485543.JMME01000021_gene802	209.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-1443719_24	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-1443719_24	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_25	phrog_4973	43.3	0.0000000000056	N/A	unknown function
Pfam	UHGV-1443719_25	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1443719_25	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
KOfam	UHGV-1443719_29	K00571	173.6	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1443719_29	phrog_67	192.6	0	DNA methyltransferase	other
UniRef90	UHGV-1443719_29	UniRef90_A0A2D6M9R3	263.0	0	Type II methyltransferase	N/A
eggNOG-mapper	UHGV-1443719_29	1151292.QEW_0441	232.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1443719_29	MTase_II_00037	218.9	0	Type II methyltransferase	RM
Pfam	UHGV-1443719_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1443719_29	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1443719_29	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_30	phrog_3136	120.7	5.3e-36	N/A	unknown function
UniRef90	UHGV-1443719_30	UniRef90_A0A3D0HBD2	92.4	1.87e-20	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1443719_30	1235792.C808_00630	73.2	0.000000000000182	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1443719_30	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1443719_30	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_31	phrog_824	102.3	2.9e-30	N/A	unknown function
UniRef90	UHGV-1443719_31	UniRef90_A0A1M5ZHV0	89.0	7.45e-20	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1443719_31	1027273.GZ77_20585	84.3	9.46e-19	VRR-NUC domain	N/A
Pfam	UHGV-1443719_31	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
KOfam	UHGV-1443719_33	K00558	196.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1443719_33	phrog_116	217.9	0	DNA methyltransferase	other
UniRef90	UHGV-1443719_33	UniRef90_A0A7K3ZBD4	375.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1443719_33	397290.C810_05213	328.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1443719_33	MTase_II_00058	219.1	0	Type II methyltransferase	RM
Pfam	UHGV-1443719_33	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1443719_33	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1443719_33	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1443719_33	PF00145,MF_02100,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_34	phrog_14970	219.5	0	N/A	unknown function
UniRef90	UHGV-1443719_34	UniRef90_A0A3P6JH63	164.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-1443719_34	469604.HMPREF0946_00830	177.0	0	DNA recombination	N/A
COG	UHGV-1443719_34	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1443719_34	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1443719_35	phrog_253	126.6	1.6e-37	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443719_35	UniRef90_UPI001898EED4	103.0	7.84e-25	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1443719_35	1129146.H2BDF7_9CAUD	79.7	1.69e-16	Siphovirus Gp157	N/A
Pfam	UHGV-1443719_35	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1443719_35	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443719_38	PF01376	N/A	N/A	N/A	N/A
KOfam	UHGV-1443719_40	K07729	61.8	1.5e-17	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1443719_40	phrog_8	59.6	7.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443719_40	UniRef90_UPI0009E291B2	50.4	0.000000708	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1443719_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443719_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1443719_40	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1443719	Yes	28,881	40	100	1
UHGV-1380258	No	22,155	41	64	1
UHGV-0208880	No	13,605	42	39	1