vOTU vOTU-058385

vOTU: vOTU-058385

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-058385
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00027 → vSUBFAM-00430 → vGENUS-02630 → vSUBGEN-01364 → vOTU-058385
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1449973
Biosample ID	N/A
Genome length (bp)	44,541 bps
CheckV completeness	100.00% (Complete)
CDS count	58
CDS density	81.60%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	197	Host agreement	98.48
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1449973_7	PF21138,NF009630,COG2375	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_8	phrog_2002	49.7	0.000000000000032	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1449973_8	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_10	phrog_374	59.1	8.1e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1449973_10	320843.Q4ZBR0_9CAUD	54.3	0.000000183	sequence-specific DNA binding transcription factor activity	N/A
KOfam	UHGV-1449973_11	K09882	118.0	9.1e-35	cobS; cobaltochelatase CobS [EC:6.6.1.2]	N/A
PHROG	UHGV-1449973_11	phrog_249	159.5	0	porphyrin biosynthesis	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1449973_11	UniRef90_UPI001373859D	232.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1449973_11	278957.ABEA03000120_gene1205	146.0	6.1e-38	Associated with various cellular activities	N/A
Pfam	UHGV-1449973_11	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
Pfam	UHGV-1449973_11	PF08406	N/A	N/A	CbbQ/NirQ/NorQ C-terminal	CbbQ_C
COG	UHGV-1449973_11	COG0714	N/A	N/A	MoxR-like ATPase	N/A
structural_annotation	UHGV-1449973_11	PF07728,MF_00016,TIGR01650,COG0714	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_12	phrog_1909	136.5	1.50001e-40	N/A	unknown function
eggNOG-mapper	UHGV-1449973_12	1458697.W6E8E8_9CAUD	61.6	0.0000000546	N/A	N/A
PHROG	UHGV-1449973_14	phrog_159	41.7	0.000000000012	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
structural_annotation	UHGV-1449973_14	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_15	phrog_1706	54.7	0.0000000000000016	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1449973_15	1499968.TCA2_4616	55.5	0.00000498	DNA catabolic process, exonucleolytic	N/A
COG	UHGV-1449973_15	COG1468	N/A	N/A	CRISPR/Cas system-associated exonuclease Cas4, RecB family	N/A
structural_annotation	UHGV-1449973_15	PF01930,MF_03030,TIGR00372,COG5377	N/A	N/A	N/A	N/A
Pfam	UHGV-1449973_17	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
KOfam	UHGV-1449973_20	K03553	180.2	0	recA; recombination protein RecA	N/A
PHROG	UHGV-1449973_20	phrog_97	171.2	0	UvsX-like recombinase	other
UniRef90	UHGV-1449973_20	UniRef90_A0A843GSV7	387.0	0	RECA_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1449973_20	1123500.ATUU01000001_gene371	142.0	1.36e-36	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-1449973_20	PF00154	N/A	N/A	recA bacterial DNA recombination protein	RecA
COG	UHGV-1449973_20	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1449973_20	PF00154,MF_00268,TIGR02012,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_21	phrog_799	83.8	2.1e-24	DNA methyltransferase	other
UniRef90	UHGV-1449973_21	UniRef90_UPI00164E7D72	257.0	0	sugar-phospahte nucleotidyltransferase	N/A
eggNOG-mapper	UHGV-1449973_21	1235797.C816_04032	181.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-1449973_21	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-1449973_21	PF13651,MF_00607,NF000077,COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-1449973_23	K02337	741.7	0	dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]	N/A
PHROG	UHGV-1449973_23	phrog_405	697.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449973_23	UniRef90_A0A843GPT9	1098.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-1449973_23	1158345.JNLL01000001_gene729	413.0	0	TIGRFAM DNA polymerase III, alpha subunit	N/A
Pfam	UHGV-1449973_23	PF02811	N/A	N/A	PHP domain	PHP
Pfam	UHGV-1449973_23	PF07733	N/A	N/A	Bacterial DNA polymerase III alpha NTPase domain	DNA_pol3_alpha
Pfam	UHGV-1449973_23	PF17657	N/A	N/A	Bacterial DNA polymerase III alpha subunit finger domain	DNA_pol3_finger
Pfam	UHGV-1449973_23	PF14579	N/A	N/A	Helix-hairpin-helix motif	HHH_6
NCBIFam	UHGV-1449973_23	TIGR00594.1	N/A	N/A	DNA polymerase III subunit alpha	N/A
COG	UHGV-1449973_23	COG0587	N/A	N/A	DNA polymerase III, alpha subunit	N/A
structural_annotation	UHGV-1449973_23	PF07733,PF02811,PF17657,PF14579,MF_01902,TIGR00594,COG0587	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_24	phrog_236	91.8	1.4e-26	nucleotide kinase	other
UniRef90	UHGV-1449973_24	UniRef90_UPI001D04CE99	124.0	1.41e-35	N/A	N/A
eggNOG-mapper	UHGV-1449973_24	1123263.AUKY01000015_gene1590	84.0	1.75e-20	N/A	N/A
Pfam	UHGV-1449973_24	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1449973_24	PF11753	N/A	N/A	N/A	N/A
UniRef90	UHGV-1449973_25	UniRef90_A0A7X8WD06	72.0	0.000000000000198	N/A	N/A
structural_annotation	UHGV-1449973_25	PF12643,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449973_26	PF08804	N/A	N/A	N/A	N/A
KOfam	UHGV-1449973_27	K02316	138.2	6.40001e-41	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1449973_27	phrog_47	133.2	2.2e-39	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449973_27	UniRef90_A0A843GN62	345.0	0	Toprim domain-containing protein	N/A
eggNOG-mapper	UHGV-1449973_27	573061.Clocel_1457	90.5	4.35e-17	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-1449973_27	drt-UG29	43.5	2.5e-22	DRT	DRT
Pfam	UHGV-1449973_27	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
Pfam	UHGV-1449973_27	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-1449973_27	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1449973_27	PF01807,PF13155,MF_00974,TIGR01391,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_31	phrog_937	70.3	2.7e-20	hemolysin	other
eggNOG-mapper	UHGV-1449973_31	478749.BRYFOR_07561	100.0	4.05e-26	N/A	N/A
PHROG	UHGV-1449973_32	phrog_1220	231.1	0	head protein	head and packaging
UniRef90	UHGV-1449973_32	UniRef90_A0A6B3YJZ4	156.0	6.65056e-42	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-1449973_32	536232.CLM_2920	157.0	5.35997e-42	N/A	N/A
structural_annotation	UHGV-1449973_32	PF08931,PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_33	phrog_538	257.0	0	minor tail protein	tail
UniRef90	UHGV-1449973_33	UniRef90_A0A1M6L0E8	198.0	0	Virus ReqiPepy6 Gp37-like protein	N/A
eggNOG-mapper	UHGV-1449973_33	536232.CLM_2044	185.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-1449973_33	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1449973_33	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_34	phrog_36410	110.7	4.4e-33	N/A	unknown function
UniRef90	UHGV-1449973_34	UniRef90_A0A7X9C3E1	339.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1449973_34	536232.CLM_2922	137.0	9.75e-36	Phage tail protein	N/A
Pfam	UHGV-1449973_34	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1449973_34	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1449973_34	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_35	phrog_1533	490.5	0	tail length tape measure protein	tail
UniRef90	UHGV-1449973_35	UniRef90_A0A351TJS6	367.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1449973_35	411473.RUMCAL_03183	368.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1449973_35	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1449973_35	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1449973_35	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1449973_35	PF10145,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_36	phrog_6280	113.1	1.4e-33	N/A	unknown function
UniRef90	UHGV-1449973_36	UniRef90_A0A8J6PH67	112.0	1.67e-28	Esterase	N/A
eggNOG-mapper	UHGV-1449973_36	445335.CBN_3078	101.0	8.41e-25	N/A	N/A
PHROG	UHGV-1449973_37	phrog_6686	141.3	5.09933e-42	tail tube protein	tail
UniRef90	UHGV-1449973_37	UniRef90_A0A1C6KI12	171.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1449973_37	1304880.JAGB01000002_gene2211	118.0	7.43e-31	N/A	N/A
structural_annotation	UHGV-1449973_37	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_38	phrog_7585	66.0	6.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1449973_38	1196322.A370_04060	62.8	0.00000000011	N/A	N/A
structural_annotation	UHGV-1449973_38	PF05657,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449973_39	632292.Calhy_0769	79.3	1.34e-17	Phage virion morphogenesis	N/A
COG	UHGV-1449973_39	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449973_39	PF04883,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1449973_40	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_41	phrog_4020	63.0	4e-18	N/A	unknown function
eggNOG-mapper	UHGV-1449973_41	1121342.AUCO01000012_gene1692	51.2	0.000000263	N/A	N/A
PHROG	UHGV-1449973_43	phrog_29	260.7	0	major head protein	head and packaging
UniRef90	UHGV-1449973_43	UniRef90_UPI00082C04A5	380.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1449973_43	1158612.I580_01912	321.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1449973_43	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1449973_43	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1449973_44	1158612.I580_01911	53.5	0.000000266	N/A	N/A
structural_annotation	UHGV-1449973_44	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_45	phrog_2303	79.0	6.8e-23	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1449973_45	997296.PB1_16214	65.5	0.000000000485	N/A	N/A
structural_annotation	UHGV-1449973_45	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_46	phrog_1315	42.4	0.0000000000086	N/A	unknown function
structural_annotation	UHGV-1449973_47	PF06133	N/A	N/A	N/A	N/A
KOfam	UHGV-1449973_49	K11044	72.1	8.2e-21	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	N/A
PHROG	UHGV-1449973_49	phrog_1657	162.1	0	head morphogenesis	head and packaging
UniRef90	UHGV-1449973_49	UniRef90_A0A349YJR5	668.0	0	ADPrib_exo_Tox domain-containing protein	N/A
eggNOG-mapper	UHGV-1449973_49	1567015.A0A0A7RUI1_9VIRU	144.0	4.98e-34	Phage Mu protein F like protein	N/A
Pfam	UHGV-1449973_49	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
structural_annotation	UHGV-1449973_49	PF03496,NF040688	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_50	phrog_64	111.8	4.4e-33	portal protein	head and packaging
UniRef90	UHGV-1449973_50	UniRef90_A0A843GSM3	405.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1449973_50	1121342.AUCO01000012_gene1700	149.0	1.63e-36	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1449973_50	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1449973_50	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1449973_51	K01448	119.8	2.6e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1449973_51	phrog_435	189.1	0	endolysin	lysis
UniRef90	UHGV-1449973_51	UniRef90_B0G4K0	251.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1449973_51	411461.DORFOR_01187	251.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1449973_51	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1449973_51	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1449973_51	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1449973_51	PF01520,PF01471,MF_00562,TIGR02883,NF038080,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_52	phrog_355	50.1	0.000000000000035	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1449973_52	UniRef90_A0A385Q0Q2	99.0	5.24e-25	N/A	N/A
eggNOG-mapper	UHGV-1449973_52	1256908.HMPREF0373_00479	94.7	4.13e-24	N/A	N/A
Pfam	UHGV-1449973_52	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1449973_52	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_53	phrog_443	58.1	2.4e-16	holin	lysis
UniRef90	UHGV-1449973_53	UniRef90_UPI000C75746C	107.0	7.34e-29	holin	N/A
eggNOG-mapper	UHGV-1449973_53	626523.GCWU000342_01012	87.0	1.61e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1449973_53	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1449973_53	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1449973_55	K06909	290.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1449973_55	phrog_3717	133.3	5.59959e-42	terminase large subunit	head and packaging
UniRef90	UHGV-1449973_55	UniRef90_A0A349YI29	656.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1449973_55	536232.CLM_2529	464.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1449973_55	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1449973_55	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1449973_55	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1449973_55	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1449973_55	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1449973_56	phrog_309	124.1	8.3e-37	terminase small subunit	head and packaging
UniRef90	UHGV-1449973_56	UniRef90_A0A843GSL4	130.0	1.17e-34	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1449973_56	742733.HMPREF9469_01828	102.0	6.83e-25	transposase activity	N/A
Pfam	UHGV-1449973_56	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
COG	UHGV-1449973_56	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1449973	Yes	44,541	34	100	1