vOTU vOTU-058481

vOTU: vOTU-058481

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-058481
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-01342 → vSUBGEN-28779 → vOTU-058481
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1849100
Biosample ID	SAMN18819172
Genome length (bp)	41,891 bps
CheckV completeness	100.00% (Complete)
CDS count	63
CDS density	93.96%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	40	Host agreement	90
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1849100_3	K00571	92.6	1.7e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1849100_3	phrog_67	59.4	1.3e-25	DNA methyltransferase	other
UniRef90	UHGV-1849100_3	UniRef90_UPI001331804A	260.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1849100_3	1268240.ATFI01000007_gene431	199.0	0	DNA methylase	N/A
PADLOC	UHGV-1849100_3	MTase_II_00172	129.6	2.9e-38	Type II methyltransferase	RM
Pfam	UHGV-1849100_3	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1849100_3	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1849100_3	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_4	phrog_190	108.0	8.2e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1849100_4	UniRef90_A0A8D9PDD6	249.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-1849100_4	1226322.HMPREF1545_00295	114.0	3.49e-30	N/A	N/A
Pfam	UHGV-1849100_4	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1849100_4	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-1849100_6	K02315	123.9	1.7e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1849100_6	phrog_50	130.8	1.2e-38	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1849100_6	UniRef90_A0A810Q3X8	295.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-1849100_6	445972.ANACOL_01829	187.0	0	N/A	N/A
Pfam	UHGV-1849100_6	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-1849100_6	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1849100_6	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_7	phrog_15768	80.6	1.7e-24	N/A	unknown function
UniRef90	UHGV-1849100_7	UniRef90_A0A416HMA1	107.0	3.82e-25	N/A	N/A
eggNOG-mapper	UHGV-1849100_7	445970.ALIPUT_02689	80.9	0.00000000000000112	DNA-binding transcription factor activity	N/A
Pfam	UHGV-1849100_7	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1849100_7	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-1849100_7	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1849100_9	K03111	123.2	3.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1849100_9	phrog_44	121.9	5.7e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1849100_9	UniRef90_A0A8D9PDS7	248.0	0	Single strand binding protein	N/A
eggNOG-mapper	UHGV-1849100_9	552398.HMPREF0866_01635	119.0	8.91e-33	Single-strand binding protein family	N/A
Pfam	UHGV-1849100_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1849100_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1849100_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1849100_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1849100_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_10	phrog_7566	96.8	1.3e-28	N/A	unknown function
UniRef90	UHGV-1849100_10	UniRef90_A0A8D9UHC0	193.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-1849100_10	693746.OBV_24070	122.0	5.46e-35	N/A	N/A
PHROG	UHGV-1849100_12	phrog_72	54.1	0.0000000000000013	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1849100_12	UniRef90_A0A8D9PDS2	357.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1849100_12	445972.ANACOL_01825	132.0	1.11e-36	N/A	N/A
structural_annotation	UHGV-1849100_12	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_13	phrog_155	150.1	1.4013e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1849100_13	UniRef90_UPI001439856C	197.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1849100_13	748224.HMPREF9436_03360	173.0	0	ERF superfamily	N/A
Pfam	UHGV-1849100_13	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1849100_13	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_14	phrog_253	85.9	5.4e-25	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1849100_14	UniRef90_A0A8D9PDS3	313.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-1849100_14	748224.HMPREF9436_03356	107.0	3.26e-27	Siphovirus Gp157	N/A
Pfam	UHGV-1849100_14	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1849100_14	PF05565	N/A	N/A	N/A	N/A
UniRef90	UHGV-1849100_16	UniRef90_A0A8D9UH91	309.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1849100_16	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1849100_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1849100_16	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-1849100_22	K22300	40.4	0.000000000058	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
Pfam	UHGV-1849100_22	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
UniRef90	UHGV-1849100_23	UniRef90_A0A8D9PDN2	127.0	1.82e-37	DNA-binding protein	N/A
structural_annotation	UHGV-1849100_23	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_26	phrog_8	42.6	0.000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1849100_26	UniRef90_A0A8D9UHB1	187.0	0	Repressor protein CI	N/A
eggNOG-mapper	UHGV-1849100_26	1507.HMPREF0262_00424	58.9	0.000000000967	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1849100_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1849100_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1849100_26	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1849100_28	UniRef90_A0A8D9UHA6	345.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-1849100_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1849100_28	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1849100_28	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1849100_29	K14059	168.8	0	int; integrase	N/A
PHROG	UHGV-1849100_29	phrog_1	162.7	0	integrase	integration and excision
UniRef90	UHGV-1849100_29	UniRef90_A0A174HFN7	345.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-1849100_29	742738.HMPREF9460_01344	218.0	0	Phage integrase family	N/A
Pfam	UHGV-1849100_29	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1849100_29	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1849100_29	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1849100_30	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_31	phrog_20016	184.0	0	N/A	unknown function
UniRef90	UHGV-1849100_31	UniRef90_A0A285PT46	187.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1849100_31	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-1849100_31	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_32	phrog_16490	124.7	1e-36	N/A	unknown function
eggNOG-mapper	UHGV-1849100_32	1408437.JNJN01000043_gene803	164.0	0	N/A	N/A
PHROG	UHGV-1849100_33	phrog_22984	75.7	5e-22	N/A	unknown function
PHROG	UHGV-1849100_34	phrog_21718	103.6	1.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-1849100_34	397290.C810_05210	70.9	0.000000000000232	N/A	N/A
PHROG	UHGV-1849100_35	phrog_3754	94.2	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1849100_35	476272.RUMHYD_01764	162.0	0	N/A	N/A
KOfam	UHGV-1849100_36	K07741	54.6	0.0000000000000037	antB; anti-repressor protein	N/A
PHROG	UHGV-1849100_36	phrog_130	204.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1849100_36	UniRef90_UPI001C128E30	353.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1849100_36	663952.SDD27957_09050	238.0	0	COG3617 Prophage antirepressor	N/A
Pfam	UHGV-1849100_36	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1849100_36	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1849100_36	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1849100_36	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-1849100_38	UniRef90_A0A845RC52	75.9	4.88e-17	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-1849100_38	PF01402,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-1849100_39	UniRef90_A0A8D9PDQ3	112.0	8.27e-31	ECF sigma factor	N/A
PHROG	UHGV-1849100_40	phrog_22978	924.9	0	N/A	unknown function
UniRef90	UHGV-1849100_40	UniRef90_R5G452	472.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-1849100_40	1410650.JHWL01000003_gene2814	301.0	0	N/A	N/A
eggNOG-mapper	UHGV-1849100_41	1410650.JHWL01000003_gene2815	55.8	0.00000831	N/A	N/A
UniRef90	UHGV-1849100_42	UniRef90_A0A8D9UGT1	135.0	1.04e-38	Sigma C capsid protein	N/A
PHROG	UHGV-1849100_43	phrog_511	221.4	0	internal virion protein	head and packaging
UniRef90	UHGV-1849100_43	UniRef90_A0A8D9UH72	853.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-1849100_43	1226322.HMPREF1545_00785	330.0	0	N/A	N/A
structural_annotation	UHGV-1849100_43	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_44	phrog_12105	85.2	4.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-1849100_44	1519439.JPJG01000060_gene1891	62.8	0.0000000000499	N/A	N/A
PHROG	UHGV-1849100_45	phrog_435	51.9	0.000000000000015	endolysin	lysis
UniRef90	UHGV-1849100_45	UniRef90_A0A8D9PDS4	458.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-1849100_45	1226322.HMPREF1545_01953	82.4	4.9e-16	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1849100_45	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1849100_45	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_46	phrog_1129	79.9	1.9e-23	holin	lysis
UniRef90	UHGV-1849100_46	UniRef90_A0A8D9PDD4	184.0	0	Holin	N/A
eggNOG-mapper	UHGV-1849100_46	1226322.HMPREF1545_00069	113.0	1.51e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1849100_46	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1849100_46	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_47	phrog_4105	104.7	5e-31	N/A	unknown function
UniRef90	UHGV-1849100_47	UniRef90_A0A8D9UHA9	200.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-1849100_47	411460.RUMTOR_01326	142.0	8.18358e-43	N/A	N/A
PHROG	UHGV-1849100_50	phrog_1419	45.1	0.0000000000006	tail protein	tail
COG	UHGV-1849100_50	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-1849100_51	phrog_15239	86.6	1.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-1849100_51	1449126.JQKL01000003_gene1694	52.4	0.00000096	N/A	N/A
PHROG	UHGV-1849100_52	phrog_1357	276.0	0	major head protein	head and packaging
UniRef90	UHGV-1849100_52	UniRef90_A0A8D9UH64	620.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1849100_52	1449126.JQKL01000003_gene1695	399.0	0	N/A	N/A
Pfam	UHGV-1849100_52	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1849100_52	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1849100_52	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_53	phrog_13908	309.6	0	N/A	unknown function
UniRef90	UHGV-1849100_53	UniRef90_A0A174CZ20	113.0	7.05e-25	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-1849100_53	1410650.JHWL01000003_gene2831	119.0	9.72e-29	N/A	N/A
UniRef90	UHGV-1849100_54	UniRef90_A0A8D9PDR6	180.0	0	YsxB-like protein	N/A
Pfam	UHGV-1849100_54	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-1849100_54	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_55	phrog_156	334.3	0	portal protein	head and packaging
UniRef90	UHGV-1849100_55	UniRef90_A0A8D9UH10	1138.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1849100_55	748224.HMPREF9436_01396	530.0	0	N/A	N/A
structural_annotation	UHGV-1849100_55	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1849100_56	K06909	116.8	2.2e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1849100_56	phrog_979	197.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1849100_56	UniRef90_A0A8D9PDR5	978.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-1849100_56	657322.FPR_02290	618.0	0	Terminase-like family	N/A
Pfam	UHGV-1849100_56	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1849100_56	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1849100_56	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_57	phrog_606	88.3	8.2e-26	terminase small subunit	head and packaging
UniRef90	UHGV-1849100_57	UniRef90_UPI00195648BB	181.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1849100_57	445972.ANACOL_01838	149.0	3.92364e-44	DNA-packaging protein gp3	N/A
Pfam	UHGV-1849100_57	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1849100_57	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1849100_58	K22299	47.4	0.00000000000045	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1849100_58	phrog_8	64.7	2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1849100_58	UniRef90_A0A8D9PDC4	152.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-1849100_58	1226322.HMPREF1545_00039	79.0	1.69e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-1849100_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1849100_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1849100_58	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1849100_59	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1849100_60	phrog_18716	56.0	7.1e-16	N/A	unknown function
UniRef90	UHGV-1849100_60	UniRef90_UPI001C023F62	74.7	6e-16	N/A	N/A
eggNOG-mapper	UHGV-1849100_60	665959.HMPREF1013_00856	53.9	0.0000000343	N/A	N/A
Pfam	UHGV-1849100_60	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
PHROG	UHGV-1849100_61	phrog_38832	80.4	9.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1849100_61	665956.HMPREF1032_00143	71.6	0.000000000000276	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1849100	Yes	41,891	56	100	1