Viral OTU vOTU-059560

vOTU: vOTU-059560

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster Properties
vOTU ID	vOTU-059560
Number of Genomes	1
Taxonomy (ICTV)	root → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00128 → vGENUS-20599 → vSUBGEN-40656 → vOTU-059560
Host Lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Viral Lifestyle	temperate

Representative Genome
Genome ID	UHGV-0041016
Biosample ID	N/A
Length	38,074 bps
CheckV Completeness	93.75% (High-quality)
CDS Count	68
CDS Density	90.38%
tRNA Count	0
Viral Confidence	Confident

Representative Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.75)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0041016_2	phrog_9534	122.5	2.4e-36	head protein	head and packaging
eggNOG-mapper	UHGV-0041016_2	748224.HMPREF9436_00702	86.7	1.3e-16	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0041016_3	phrog_538	109.0	4.4e-32	minor tail protein	tail
UniRef90	UHGV-0041016_3	UniRef90_UPI001C113FEF	684.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0041016_3	931626.Awo_c34990	62.0	0.0000000771	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0041016_3	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0041016_3	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_4	phrog_33	67.9	2.3e-19	distal tail protein Dit	tail
UniRef90	UHGV-0041016_4	UniRef90_UPI001C0FCFFA	558.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0041016_4	536232.CLM_2045	108.0	7.21e-25	Phage tail protein	N/A
COG	UHGV-0041016_4	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0041016_4	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_5	phrog_991	206.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0041016_5	1201292.DR75_1631	134.0	1.38e-29	Phage-related minor tail protein	N/A
Pfam	UHGV-0041016_5	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0041016_5	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0041016_5	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0041016_5	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_7	phrog_885	90.2	1.9e-26	major tail protein	tail
eggNOG-mapper	UHGV-0041016_7	1111121.HMPREF1247_0789	150.0	2.11596e-43	N/A	N/A
structural_annotation	UHGV-0041016_7	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_8	phrog_17405	49.3	0.000000000000084	head protein	head and packaging
structural_annotation	UHGV-0041016_8	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_9	phrog_17977	69.0	6e-20	N/A	unknown function
UniRef90	UHGV-0041016_9	UniRef90_A0A285PT57	130.0	3.99e-37	Phage head-tail joining protein	N/A
structural_annotation	UHGV-0041016_9	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_11	phrog_544	118.5	6.6e-35	major head protein	head and packaging
UniRef90	UHGV-0041016_11	UniRef90_A0A1C6B5R0	322.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0041016_11	476272.RUMHYD_01776	304.0	0	N/A	N/A
structural_annotation	UHGV-0041016_11	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0041016_12	UniRef90_A0A6B9SU02	60.8	0.0000000605	Fibronectin autolysin	N/A
structural_annotation	UHGV-0041016_12	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_13	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_14	phrog_5	53.8	0.0000000000000054	tail completion or Neck1 protein	connector
UniRef90	UHGV-0041016_14	UniRef90_A4E784	89.0	3.25e-20	HK97 gp10 family phage protein	N/A
NCBIFam	UHGV-0041016_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
COG	UHGV-0041016_14	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_16	phrog_859	92.9	1.2e-27	portal protein	head and packaging
UniRef90	UHGV-0041016_16	UniRef90_A0A3A9EHQ6	224.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0041016_16	1504822.CCNO01000013_gene286	217.0	0	cell adhesion	N/A
Pfam	UHGV-0041016_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0041016_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_16	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_17	phrog_64	146.4	1.09301e-43	portal protein	head and packaging
UniRef90	UHGV-0041016_17	UniRef90_A0A856HZB4	434.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0041016_17	673376.F2VHW1_9CAUD	209.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0041016_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0041016_17	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_18	phrog_38	179.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0041016_18	UniRef90_UPI00166CA12B	447.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0041016_18	1140001.I571_01829	451.0	0	N/A	N/A
structural_annotation	UHGV-0041016_18	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-0041016_20	K03497	51.3	0.000000000000011	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0041016_20	phrog_21498	302.4	0	N/A	unknown function
UniRef90	UHGV-0041016_20	UniRef90_A0A7X2P836	292.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0041016_20	469378.Ccur_02830	285.0	0	DNA binding	N/A
PADLOC	UHGV-0041016_20	MTase_II_00015	92.2	7.1e-27	Type II methyltransferase	RM
Pfam	UHGV-0041016_20	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0041016_20	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0041016_20	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0041016_21	742738.HMPREF9460_02503	61.6	0.0000000000522	N/A	N/A
PHROG	UHGV-0041016_25	phrog_924	52.5	0.000000000000011	N/A	unknown function
UniRef90	UHGV-0041016_25	UniRef90_UPI000EB16F57	57.8	0.00000000345	N/A	N/A
Pfam	UHGV-0041016_25	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0041016_25	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_27	phrog_3136	129.4	9.1e-39	N/A	unknown function
UniRef90	UHGV-0041016_27	UniRef90_UPI001C26B029	134.0	1.43e-35	ASCH domain-containing protein	N/A
structural_annotation	UHGV-0041016_27	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_29	phrog_9298	65.8	5.2e-19	radical SAM domain protein	other
UniRef90	UHGV-0041016_29	UniRef90_A0A841L4D7	282.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-0041016_29	742817.HMPREF9449_01796	274.0	0	radical SAM domain protein	N/A
COG	UHGV-0041016_29	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0041016_29	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
Pfam	UHGV-0041016_33	PF09889	N/A	N/A	N/A	DUF2116
structural_annotation	UHGV-0041016_33	PF09889,COG4068	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_34	phrog_9804	123.4	1.7e-36	N/A	unknown function
UniRef90	UHGV-0041016_34	UniRef90_A0A174S716	193.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0041016_34	585394.RHOM_14005	122.0	1.94e-32	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0041016_34	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0041016_34	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_35	phrog_16304	66.0	9.4e-19	N/A	unknown function
UniRef90	UHGV-0041016_35	UniRef90_UPI000E537812	104.0	1.46e-23	N/A	N/A
eggNOG-mapper	UHGV-0041016_35	931626.Awo_c31180	91.3	5.34e-19	DnaD domain protein	N/A
AcrCatalog	UHGV-0041016_35	cluster_14472	77.0	1.56e-18	NA	N/A
Pfam	UHGV-0041016_35	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0041016_35	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0041016_35	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_36	phrog_190	110.9	1.1e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041016_36	UniRef90_A0A3R6WN18	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0041016_36	1236514.BAKL01000051_gene3708	99.4	2.11e-25	N/A	N/A
Pfam	UHGV-0041016_36	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0041016_36	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_37	phrog_18107	109.0	5.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0041016_37	476272.RUMHYD_02831	149.0	1.14066e-42	N/A	N/A
structural_annotation	UHGV-0041016_37	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_38	phrog_2872	222.1	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041016_38	UniRef90_UPI00058FD242	284.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0041016_38	1345695.CLSA_c30180	281.0	0	AAA domain	N/A
structural_annotation	UHGV-0041016_38	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_39	phrog_253	135.2	3.9e-40	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0041016_39	UniRef90_A0A7G9G713	127.0	2.21e-34	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0041016_39	397290.C810_05162	135.0	3.21e-38	Siphovirus Gp157	N/A
Pfam	UHGV-0041016_39	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0041016_39	PF05565	N/A	N/A	N/A	N/A
KOfam	UHGV-0041016_40	K07729	50.5	0.000000000000051	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0041016_40	phrog_8	44.4	0.000000000004	transcriptional regulator	transcription regulation
UniRef90	UHGV-0041016_40	UniRef90_UPI0002EC8427	53.9	0.0000000413	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0041016_40	1235794.C811_01748	52.0	0.000000195	Putative zinc ribbon domain	N/A
PADLOC	UHGV-0041016_40	retron_type_VI_hth_cluster2_1	42.4	0.000000000019	N/A	Retron
Pfam	UHGV-0041016_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0041016_40	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0041016_40	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_44	PF20432,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_46	phrog_8	55.2	0.0000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-0041016_46	UniRef90_A0A2V2F4F9	77.4	3.81e-16	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0041016_46	97138.C820_00203	60.8	0.000000000357	Transcriptional	N/A
COG	UHGV-0041016_46	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0041016_46	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_47	PF09202,MF_01177,TIGR02702,COG1846	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0041016_51	1507.HMPREF0262_00289	54.7	0.00000421	sequence-specific DNA binding	N/A
Pfam	UHGV-0041016_51	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0041016_51	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0041016_51	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0041016_52	K14059	136.6	3.5e-40	int; integrase	N/A
PHROG	UHGV-0041016_52	phrog_1	134.9	8.20001e-40	integrase	integration and excision
UniRef90	UHGV-0041016_52	UniRef90_A0A3D2HVQ9	387.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0041016_52	1226322.HMPREF1545_00144	130.0	2.59e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0041016_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0041016_52	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0041016_52	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0041016_54	UniRef90_A0A174XWS3	85.5	1.58e-19	Bacterial regulatory proteins, luxR family	N/A
eggNOG-mapper	UHGV-0041016_54	485916.Dtox_2202	63.5	0.000000000247	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0041016_54	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
Pfam	UHGV-0041016_54	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0041016_54	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_58	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_59	phrog_20016	174.4	0	N/A	unknown function
UniRef90	UHGV-0041016_59	UniRef90_A0A2Z4QB67	152.0	8.40779e-45	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0041016_59	1226322.HMPREF1545_00077	150.0	8.40779e-45	N/A	N/A
structural_annotation	UHGV-0041016_59	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_60	phrog_16490	151.8	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0041016_60	1408437.JNJN01000043_gene803	100.0	1.57e-22	N/A	N/A
PHROG	UHGV-0041016_61	phrog_22984	68.1	1.2e-19	N/A	unknown function
PHROG	UHGV-0041016_62	phrog_21718	44.2	0.000000000003	N/A	unknown function
UniRef90	UHGV-0041016_62	UniRef90_A0A285PT36	85.5	2e-18	Consensus disorder prediction	N/A
PHROG	UHGV-0041016_63	phrog_3754	102.8	3.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0041016_63	476272.RUMHYD_01764	138.0	1.20999e-40	N/A	N/A
structural_annotation	UHGV-0041016_64	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_65	phrog_6918	82.8	3.1e-24	holin	lysis
UniRef90	UHGV-0041016_65	UniRef90_UPI001897547F	99.8	5.72e-25	phage holin, LLH family	N/A
eggNOG-mapper	UHGV-0041016_65	1297617.JPJD01000020_gene301	97.4	9.51e-25	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0041016_65	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0041016_65	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0041016_66	phrog_774	71.3	1.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0041016_66	397290.C810_05225	89.0	4.73e-22	N/A	N/A
PHROG	UHGV-0041016_67	phrog_4105	101.7	4.3e-30	N/A	unknown function
UniRef90	UHGV-0041016_67	UniRef90_A0A8D9UHA9	127.0	4.62e-36	Holin protein	N/A
eggNOG-mapper	UHGV-0041016_67	742733.HMPREF9469_05011	139.0	1.71e-41	N/A	N/A
KOfam	UHGV-0041016_68	K08640	90.2	4.1e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0041016_68	phrog_894	50.0	0.000000000000043	endolysin	lysis
UniRef90	UHGV-0041016_68	UniRef90_UPI001C12323B	233.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0041016_68	1121423.JONT01000035_gene915	96.3	3.54e-22	N/A	N/A
Pfam	UHGV-0041016_68	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0041016_68	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0041016_68	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0041016_68	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A

All Viral Genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0041016	Yes	38,074	52	94	1