vOTU vOTU-059618

vOTU: vOTU-059618

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-059618
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00408 → vGENUS-01276 → vSUBGEN-36771 → vOTU-059618
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G
Host range breadth	Genus
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0119017
Biosample ID	SAMEA4431981
Genome length (bp)	33,759 bps
CheckV completeness	90.90% (High-quality)
CDS count	48
CDS density	94.00%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G	Total connections	29	Host agreement	72.41
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Eubacterium_G → Eubacterium_G sp000434315	Total connections	24	Host agreement	91.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0119017_1	phrog_5763	107.6	7.1e-32	N/A	unknown function
UniRef90	UHGV-0119017_1	UniRef90_X8GWQ1	107.0	3.85e-23	Endoplasmic reticulum-based factor for assembly of V-ATPase domain protein	N/A
eggNOG-mapper	UHGV-0119017_1	1211844.CBLM010000016_gene1501	93.6	1.07e-18	N/A	N/A
PHROG	UHGV-0119017_2	phrog_1281	104.2	8.3e-31	N/A	unknown function
UniRef90	UHGV-0119017_2	UniRef90_A0A7U9X949	224.0	0	Antitoxin SocA	N/A
eggNOG-mapper	UHGV-0119017_2	1211844.CBLM010000016_gene1502	145.0	6.78228e-43	N/A	N/A
Pfam	UHGV-0119017_2	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0119017_2	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119017_2	PF13274,COG3600	N/A	N/A	N/A	N/A
KOfam	UHGV-0119017_3	K01447	91.7	1.1e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0119017_3	phrog_9611	104.4	1.2e-30	endolysin	lysis
UniRef90	UHGV-0119017_3	UniRef90_A0A352SK06	187.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0119017_3	411490.ANACAC_00703	134.0	9.49e-37	Ami_2	N/A
Pfam	UHGV-0119017_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0119017_3	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0119017_3	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_4	phrog_872	83.5	2.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0119017_4	397290.C810_05225	112.0	2.33e-30	N/A	N/A
dbAPIS	UHGV-0119017_4	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_5	phrog_443	55.8	0.0000000000000012	holin	lysis
UniRef90	UHGV-0119017_5	UniRef90_A0A1I5VN65	87.0	3.63e-21	Phage r1t holin	N/A
eggNOG-mapper	UHGV-0119017_5	411463.EUBVEN_02210	82.4	4.11e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0119017_5	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0119017_5	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_6	phrog_4105	93.2	1.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-0119017_6	1121105.ATXL01000027_gene760	77.0	1.47e-16	N/A	N/A
PHROG	UHGV-0119017_7	phrog_16164	49.4	0.000000000000022	N/A	unknown function
PHROG	UHGV-0119017_8	phrog_6616	451.5	0	tail protein	tail
UniRef90	UHGV-0119017_8	UniRef90_A0A0J1FXD9	341.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0119017_8	1121866.AUGK01000003_gene1439	207.0	0	Phage minor structural protein	N/A
COG	UHGV-0119017_8	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0119017_8	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_9	phrog_1194	84.0	1.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0119017_9	33035.JPJF01000093_gene2242	154.0	0	N/A	N/A
structural_annotation	UHGV-0119017_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_10	phrog_1535	268.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0119017_10	UniRef90_A0A1C5PIN9	759.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0119017_10	33035.JPJF01000093_gene2243	473.0	0	phage tail tape measure protein	N/A
COG	UHGV-0119017_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0119017_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_11	phrog_8355	85.9	2.2e-25	N/A	unknown function
UniRef90	UHGV-0119017_11	UniRef90_UPI001F2CFAB2	80.5	4.83e-18	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0119017_11	1232449.BAHV02000018_gene1518	68.6	0.0000000000000378	Bacteriophage Gp15 protein	N/A
PHROG	UHGV-0119017_12	phrog_8300	88.1	7.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0119017_12	1282664.H354_06701	90.9	1.4e-22	N/A	N/A
structural_annotation	UHGV-0119017_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_13	phrog_820	114.0	8.1e-34	major tail protein	tail
eggNOG-mapper	UHGV-0119017_13	33035.JPJF01000093_gene2246	193.0	0	N/A	N/A
structural_annotation	UHGV-0119017_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_14	phrog_2595	98.5	5e-29	head-tail connector protein	connector
UniRef90	UHGV-0119017_14	UniRef90_UPI001D0627B3	135.0	1.21e-38	minor capsid protein	N/A
eggNOG-mapper	UHGV-0119017_14	1282664.H354_06686	149.0	1.54143e-44	N/A	N/A
Pfam	UHGV-0119017_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0119017_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_15	phrog_556	72.0	7.5e-21	minor head protein	head and packaging
eggNOG-mapper	UHGV-0119017_15	742740.HMPREF9474_03509	167.0	0	N/A	N/A
Pfam	UHGV-0119017_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
PHROG	UHGV-0119017_16	phrog_8710	131.0	3.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-0119017_16	1304866.K413DRAFT_0782	135.0	5.5e-40	N/A	N/A
structural_annotation	UHGV-0119017_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_17	phrog_541	88.7	5e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0119017_17	742740.HMPREF9474_03507	169.0	0	N/A	N/A
PHROG	UHGV-0119017_18	phrog_1378	61.3	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0119017_18	483218.BACPEC_01154	65.1	0.00000000000145	N/A	N/A
PHROG	UHGV-0119017_19	phrog_422	316.6	0	major head protein	head and packaging
UniRef90	UHGV-0119017_19	UniRef90_A0A413RCT9	545.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0119017_19	552396.HMPREF0863_01635	396.0	0	N/A	N/A
structural_annotation	UHGV-0119017_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_20	phrog_2303	166.5	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0119017_20	483218.BACPEC_01156	152.0	2.71852e-43	N/A	N/A
PHROG	UHGV-0119017_22	phrog_3675	109.0	1.9e-32	N/A	unknown function
UniRef90	UHGV-0119017_22	UniRef90_UPI001C02868E	121.0	1.32e-33	YjcQ family protein	N/A
eggNOG-mapper	UHGV-0119017_22	1235799.C818_04221	122.0	7.27e-35	YjcQ protein	N/A
Pfam	UHGV-0119017_22	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0119017_22	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_23	phrog_581	230.0	0	minor head protein	head and packaging
UniRef90	UHGV-0119017_23	UniRef90_A0A1C5VPR8	851.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-0119017_23	33035.JPJF01000093_gene2255	392.0	0	N/A	N/A
Pfam	UHGV-0119017_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0119017_23	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
COG	UHGV-0119017_23	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
PHROG	UHGV-0119017_24	phrog_25639	82.1	4.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0119017_24	742740.HMPREF9474_03502	68.9	0.0000000000000103	N/A	N/A
PHROG	UHGV-0119017_25	phrog_533	286.0	0	portal protein	head and packaging
UniRef90	UHGV-0119017_25	UniRef90_UPI00164B2A37	888.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0119017_25	33035.JPJF01000093_gene2257	566.0	0	N/A	N/A
structural_annotation	UHGV-0119017_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0119017_26	K06909	89.2	5.8e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0119017_26	phrog_2	78.1	1.6e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0119017_26	UniRef90_A0A413RCQ1	889.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0119017_26	552396.HMPREF0863_01628	577.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0119017_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0119017_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0119017_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0119017_27	K07474	86.3	6.8e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0119017_27	phrog_51	107.4	1.3e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0119017_27	UniRef90_A0A413RCV1	317.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0119017_27	1256908.HMPREF0373_00489	139.0	1.01e-39	Terminase small subunit	N/A
Pfam	UHGV-0119017_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0119017_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0119017_27	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_28	phrog_36	80.9	1.7e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0119017_28	UniRef90_UPI001121E44A	86.7	6.45e-19	N/A	N/A
eggNOG-mapper	UHGV-0119017_28	1408303.JNJJ01000049_gene2728	79.0	1.06e-16	N/A	N/A
COG	UHGV-0119017_28	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0119017_28	PF07374,MF_00674,TIGR02984,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119017_30	UniRef90_A0A373LPL3	121.0	7.16e-35	Chemotaxis protein	N/A
eggNOG-mapper	UHGV-0119017_30	1042156.CXIVA_01870	68.9	0.00000000000000658	N/A	N/A
structural_annotation	UHGV-0119017_30	PF10723,NF008671,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119017_31	UniRef90_A0A373LPL3	52.0	0.000000172	Chemotaxis protein	N/A
eggNOG-mapper	UHGV-0119017_31	1042156.CXIVA_01870	84.0	6.3e-21	N/A	N/A
structural_annotation	UHGV-0119017_31	NF008671,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_33	phrog_17690	123.1	1.1e-36	N/A	unknown function
UniRef90	UHGV-0119017_33	UniRef90_A0A6L5XWF4	114.0	2.03e-30	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0119017_33	33035.JPJF01000123_gene2433	107.0	1.93e-28	N/A	N/A
KOfam	UHGV-0119017_35	K00571	102.3	4e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0119017_35	phrog_16	222.7	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119017_35	UniRef90_UPI000E475660	1564.0	0	SNF2-related protein	N/A
eggNOG-mapper	UHGV-0119017_35	1298920.KI911353_gene2709	1354.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0119017_35	MTase_II_00085	44.6	1.8e-17	Type II methyltransferase	RM
Pfam	UHGV-0119017_35	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0119017_35	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0119017_35	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0119017_35	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_36	phrog_59	50.7	0.000000000000027	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119017_36	UniRef90_R7CC66	136.0	3.35e-37	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0119017_36	1410650.JHWL01000037_gene604	117.0	1.14e-30	N/A	N/A
PADLOC	UHGV-0119017_36	HEase_00016	40.8	0.0000000000019	homing endonuclease	RM
structural_annotation	UHGV-0119017_36	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119017_37	PF20531	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_38	phrog_2562	123.0	2.2e-36	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119017_38	UniRef90_A0A413RCW1	327.0	0	N/A	N/A
eggNOG-mapper	UHGV-0119017_38	1507.HMPREF0262_00435	167.0	0	N/A	N/A
Pfam	UHGV-0119017_38	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0119017_38	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0119017_38	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0119017_39	K01160	40.6	0.000000000058	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0119017_39	phrog_140	106.9	1.8e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119017_39	UniRef90_UPI00157032DC	160.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0119017_39	642492.Clole_2784	114.0	1.11e-30	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0119017_39	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0119017_39	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0119017_39	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0119017_40	PF21715,COG1654	N/A	N/A	N/A	N/A
KOfam	UHGV-0119017_41	K07455	203.6	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0119017_41	phrog_148	220.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119017_41	UniRef90_UPI0004130437	409.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0119017_41	742765.HMPREF9457_02107	376.0	0	RecT family	N/A
Pfam	UHGV-0119017_41	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0119017_41	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0119017_41	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0119017_41	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_43	phrog_674	180.8	0	N/A	unknown function
UniRef90	UHGV-0119017_43	UniRef90_A0A413RZX0	262.0	0	N/A	N/A
eggNOG-mapper	UHGV-0119017_43	742740.HMPREF9474_03487	218.0	0	N/A	N/A
Pfam	UHGV-0119017_43	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0119017_43	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0119017_44	phrog_434	157.3	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0119017_44	UniRef90_UPI0019150417	281.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0119017_44	1095750.HMPREF9970_1677	246.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0119017_44	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0119017_44	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0119017_44	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0119017_44	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0119017_48	UniRef90_UPI000E52936A	87.4	3.77e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0119017_48	887929.HMP0721_1290	69.3	0.00000000000000837	Helix-turn-helix domain of resolvase	N/A
Pfam	UHGV-0119017_48	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0119017_48	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0119017	Yes	33,759	35	91	1
UHGV-1499856	No	30,652	35	85	1
UHGV-0128944	No	31,047	35	84	1
UHGV-1304975	No	30,200	35	81	1
UHGV-1559915	No	29,120	35	80	1