vOTU vOTU-059916

vOTU: vOTU-059916

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-059916
Number of genomes	5
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → RUG11462 → ERR7745438_bin.187
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-06492 → vGENUS-16442 → vSUBGEN-29681 → vOTU-059916
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → RUG11462 → ERR7745438_bin.187
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0002214
Biosample ID	SAMEA4766184
Genome length (bp)	39,120 bps
CheckV completeness	99.90% (High-quality)
CDS count	62
CDS density	92.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae	Total connections	10	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → RUG11462 → ERR7745438_bin.187	Total connections	12	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0002214_1	K14059	174.6	0	int; integrase	N/A
PHROG	UHGV-0002214_1	phrog_1	169.1	0	integrase	integration and excision
UniRef90	UHGV-0002214_1	UniRef90_UPI000368143B	220.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0002214_1	742738.HMPREF9460_01344	246.0	0	Phage integrase family	N/A
Pfam	UHGV-0002214_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0002214_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0002214_1	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002214_3	UniRef90_A0A2N0ZC60	110.0	1.15e-26	Adhesin_P1_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_3	1033743.CAES01000057_gene4711	110.0	1.62e-27	N/A	N/A
KOfam	UHGV-0002214_4	K01356	114.1	1.9e-33	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0002214_4	phrog_4	132.4	3.7e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0002214_4	UniRef90_A0A6N9NXR9	249.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_4	428125.CLOLEP_01832	125.0	3.74e-33	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-0002214_4	retron_type_VI_hth_cluster2_1	50.4	0.000000000000037	N/A	Retron
Pfam	UHGV-0002214_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0002214_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0002214_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0002214_4	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0002214_5	K07729	40.5	0.000000000056	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0002214_5	UniRef90_A0A417QHZ7	86.7	4.45e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0002214_5	1132442.KB889752_gene869	80.5	3.05e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0002214_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0002214_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002214_6	PF11614,TIGR02588,COG2847	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_7	phrog_4583	40.3	0.000000000042	transcriptional repressor	transcription regulation
eggNOG-mapper	UHGV-0002214_7	1247726.MIM_c10620	52.0	0.00000052	Helix-turn-helix domain	N/A
Pfam	UHGV-0002214_7	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0002214_7	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
PHROG	UHGV-0002214_12	phrog_253	114.5	8.1e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002214_12	UniRef90_UPI001C3A3B51	125.0	1.44e-33	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0002214_12	1226322.HMPREF1545_04074	119.0	5.93e-32	Siphovirus Gp157	N/A
Pfam	UHGV-0002214_12	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0002214_12	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_13	phrog_2872	262.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002214_13	UniRef90_A0A316RHU5	313.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0002214_13	754027.HMPREF9554_00709	243.0	0	N/A	N/A
Pfam	UHGV-0002214_13	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0002214_13	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_14	phrog_18107	94.0	1.9e-27	N/A	unknown function
UniRef90	UHGV-0002214_14	UniRef90_R6I207	104.0	1.21e-24	PF05037 family protein	N/A
eggNOG-mapper	UHGV-0002214_14	476272.RUMHYD_02831	167.0	0	N/A	N/A
structural_annotation	UHGV-0002214_14	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_15	phrog_3490	123.6	1.4e-36	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002214_15	UniRef90_UPI000C0868DD	211.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_15	476272.RUMHYD_01740	176.0	0	ERCC4 domain	N/A
Pfam	UHGV-0002214_15	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-0002214_15	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-0002214_15	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0002214_16	K02316	89.2	6.1e-26	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0002214_16	phrog_11992	109.9	2.7e-32	N/A	unknown function
UniRef90	UHGV-0002214_16	UniRef90_UPI000F5422CA	92.4	1.34e-19	CHC2 zinc finger domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_16	926567.TheveDRAFT_0539	82.4	9e-16	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication	N/A
PADLOC	UHGV-0002214_16	drt-cluster192	78.5	1.7e-22	DRT	DRT
Pfam	UHGV-0002214_16	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0002214_16	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0002214_16	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_17	phrog_8841	523.2	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002214_17	UniRef90_UPI000C07D7A2	689.0	0	N/A	N/A
eggNOG-mapper	UHGV-0002214_17	742738.HMPREF9460_02495	483.0	0	N/A	N/A
Pfam	UHGV-0002214_17	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0002214_17	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0002214_17	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002214_17	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_23	phrog_3136	122.6	1.1e-36	N/A	unknown function
UniRef90	UHGV-0002214_23	UniRef90_UPI001C02A61B	124.0	1.65e-31	ASCH domain-containing protein	N/A
Pfam	UHGV-0002214_23	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0002214_23	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0002214_23	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002214_24	UniRef90_A0A3D4CAL9	405.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_24	1078085.HMPREF1210_01161	78.6	0.0000000000000228	GIY-YIG catalytic domain	N/A
Pfam	UHGV-0002214_24	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
PHROG	UHGV-0002214_26	phrog_10714	52.3	0.0000000000000089	N/A	unknown function
UniRef90	UHGV-0002214_26	UniRef90_R6PMU2	55.8	0.0000000554	DNA polymerase II large subunit	N/A
eggNOG-mapper	UHGV-0002214_26	97139.C824_00134	50.1	0.00000254	N/A	N/A
PHROG	UHGV-0002214_28	phrog_11237	65.5	9.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0002214_28	875454.BAEW01000017_gene1604	63.2	0.0000000000687	N/A	N/A
structural_annotation	UHGV-0002214_28	TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002214_30	UniRef90_A0A7W5ZMT3	146.0	4.1e-33	Regulator of replication initiation timing	N/A
eggNOG-mapper	UHGV-0002214_30	1121097.JCM15093_1575	133.0	1.48e-29	N/A	N/A
KOfam	UHGV-0002214_31	K06909	416.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0002214_31	phrog_3717	157.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0002214_31	UniRef90_A0A2N0ULW5	799.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0002214_31	411461.DORFOR_01162	600.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0002214_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0002214_31	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0002214_31	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0002214_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0002214_31	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_32	phrog_533	339.8	0	portal protein	head and packaging
UniRef90	UHGV-0002214_32	UniRef90_UPI00189C53D6	508.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0002214_32	1304866.K413DRAFT_3035	446.0	0	N/A	N/A
structural_annotation	UHGV-0002214_32	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_33	phrog_581	335.1	0	minor head protein	head and packaging
UniRef90	UHGV-0002214_33	UniRef90_UPI00189CAB20	469.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0002214_33	411461.DORFOR_01164	437.0	0	N/A	N/A
Pfam	UHGV-0002214_33	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0002214_33	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002214_33	PF06152,PF15887,TIGR01641,COG4307	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002214_34	UniRef90_A0A373VXK4	77.4	1.31e-17	Glutamyl-tRNA amidotransferase	N/A
PHROG	UHGV-0002214_35	phrog_918	121.0	3.5e-36	N/A	unknown function
UniRef90	UHGV-0002214_35	UniRef90_UPI000F547B2A	112.0	1.37e-30	N/A	N/A
eggNOG-mapper	UHGV-0002214_35	1499683.CCFF01000014_gene3910	109.0	1.89e-30	N/A	N/A
Pfam	UHGV-0002214_35	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0002214_35	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_36	phrog_194	107.7	1.3e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0002214_36	UniRef90_UPI001B3C6D0D	197.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0002214_36	411470.RUMGNA_02218	145.0	1.27995e-41	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0002214_36	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0002214_36	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_37	phrog_544	281.5	0	major head protein	head and packaging
UniRef90	UHGV-0002214_37	UniRef90_R6T873	426.0	0	Major head protein	N/A
eggNOG-mapper	UHGV-0002214_37	936580.HMPREF1516_0718	320.0	0	N/A	N/A
NCBIFam	UHGV-0002214_37	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0002214_37	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_38	phrog_541	88.2	7.8e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0002214_38	411902.CLOBOL_00133	102.0	1.97e-26	N/A	N/A
PHROG	UHGV-0002214_39	phrog_3366	45.7	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0002214_39	1449050.JNLE01000003_gene3887	63.5	0.0000000000458	N/A	N/A
Pfam	UHGV-0002214_39	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0002214_39	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_40	phrog_556	102.6	2.4e-30	minor head protein	head and packaging
UniRef90	UHGV-0002214_40	UniRef90_UPI000691B8FF	104.0	6.33e-26	minor capsid protein	N/A
eggNOG-mapper	UHGV-0002214_40	1449050.JNLE01000003_gene3886	104.0	1.06e-26	N/A	N/A
Pfam	UHGV-0002214_40	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0002214_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_41	phrog_3266	85.0	7.5e-25	tail completion	connector
eggNOG-mapper	UHGV-0002214_41	1449050.JNLE01000003_gene3885	140.0	9.05996e-41	N/A	N/A
structural_annotation	UHGV-0002214_41	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_42	phrog_3099	132.0	3.7e-39	N/A	unknown function
eggNOG-mapper	UHGV-0002214_42	33035.JPJF01000106_gene3126	147.0	7.00649e-43	N/A	N/A
structural_annotation	UHGV-0002214_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_43	phrog_11299	132.4	2.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-0002214_43	1449050.JNLE01000003_gene3883	82.4	4.24e-18	N/A	N/A
structural_annotation	UHGV-0002214_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_44	phrog_706	138.8	3.20001e-41	N/A	unknown function
UniRef90	UHGV-0002214_44	UniRef90_A0A2N0ULW2	241.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0002214_44	1449050.JNLE01000003_gene3882	207.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0002214_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0002214_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_45	phrog_5319	56.7	2.6e-16	outer membrane protein	other
UniRef90	UHGV-0002214_45	UniRef90_A0A1Q6JN93	191.0	0	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_45	471855.Shel_11450	92.0	1.21e-19	sh3 domain protein	N/A
COG	UHGV-0002214_45	COG3103	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002214_46	UniRef90_A0A373KVZ7	89.4	2.23e-22	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-0002214_46	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
KOfam	UHGV-0002214_49	K07741	138.1	1.4e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-0002214_49	phrog_130	257.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0002214_49	UniRef90_A0A2N5NVG8	324.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0002214_49	33035.JPJF01000057_gene3118	293.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0002214_49	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0002214_49	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0002214_49	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0002214_49	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_50	phrog_1535	269.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0002214_50	UniRef90_R6TDK7	399.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0002214_50	1235790.C805_00087	305.0	0	tape measure	N/A
COG	UHGV-0002214_50	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0002214_50	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002214_51	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_52	phrog_13879	63.3	1.6e-18	N/A	unknown function
structural_annotation	UHGV-0002214_52	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0002214_57	phrog_13256	79.9	1.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0002214_57	1226322.HMPREF1545_00132	70.5	0.00000000000000213	N/A	N/A
KOfam	UHGV-0002214_58	K08640	88.4	5.2e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0002214_58	phrog_894	67.9	1.4e-19	endolysin	lysis
UniRef90	UHGV-0002214_58	UniRef90_A0A7C3FJJ2	77.4	0.0000000000000302	N/A	N/A
eggNOG-mapper	UHGV-0002214_58	1121423.JONT01000003_gene1010	84.0	2.75e-17	N/A	N/A
Pfam	UHGV-0002214_58	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0002214_58	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0002214_58	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002214_58	PF05951,PF01471,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002214_61	1168289.AJKI01000040_gene3186	51.6	0.00000228	N/A	N/A
structural_annotation	UHGV-0002214_61	PF05168,COG1895	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0002214	Yes	39,120	33	100	1
UHGV-0002834	No	38,036	33	100	1
UHGV-0004897	No	38,036	33	100	1
UHGV-0006074	No	38,036	33	100	1
UHGV-0002445	No	37,753	33	100	1