vOTU vOTU-060686

vOTU: vOTU-060686

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-060686
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01112 → vGENUS-21566 → vSUBGEN-42901 → vOTU-060686
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1311545
Biosample ID	N/A
Genome length (bp)	36,243 bps
CheckV completeness	98.53% (High-quality)
CDS count	64
CDS density	87.69%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum	Total connections	40	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.53)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1311545_1	phrog_1535	165.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1311545_1	UniRef90_A0A1C6HCQ7	372.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1311545_1	1121866.AUGK01000003_gene1437	232.0	0	phage tail tape measure protein	N/A
COG	UHGV-1311545_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1311545_1	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_2	phrog_1194	57.0	3.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1311545_2	742740.HMPREF9474_03515	53.1	0.000000373	N/A	N/A
Pfam	UHGV-1311545_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1311545_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_3	phrog_13879	273.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1311545_3	1304866.K413DRAFT_0774	59.3	0.00000437	N/A	N/A
structural_annotation	UHGV-1311545_3	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_4	phrog_18725	50.7	0.000000000000029	N/A	unknown function
eggNOG-mapper	UHGV-1311545_4	665956.HMPREF1032_02705	102.0	3.88e-26	N/A	N/A
eggNOG-mapper	UHGV-1311545_5	742740.HMPREF9474_03518	59.3	0.0000000117	N/A	N/A
UniRef90	UHGV-1311545_6	UniRef90_R6NDD3	98.2	1.68e-25	Glycosyl hydrolase family 25	N/A
structural_annotation	UHGV-1311545_6	PF02796,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1311545_7	K07273	227.3	0	acm; lysozyme	N/A
PHROG	UHGV-1311545_7	phrog_291	176.1	0	endolysin	lysis
UniRef90	UHGV-1311545_7	UniRef90_A0A1C6ERW8	420.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1311545_7	428125.CLOLEP_00561	422.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1311545_7	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1311545_7	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1311545_7	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1311545_7	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_8	phrog_937	81.2	1.3e-23	hemolysin	other
eggNOG-mapper	UHGV-1311545_8	428125.CLOLEP_00170	224.0	0	N/A	N/A
PHROG	UHGV-1311545_9	phrog_297	55.4	0.0000000000000012	holin	lysis
UniRef90	UHGV-1311545_9	UniRef90_A7VT88	180.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-1311545_9	428125.CLOLEP_00169	182.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1311545_9	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1311545_9	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1311545_9	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1311545_9	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1311545_11	K14059	207.1	0	int; integrase	N/A
PHROG	UHGV-1311545_11	phrog_1	190.1	0	integrase	integration and excision
UniRef90	UHGV-1311545_11	UniRef90_A0A1C6FNS1	791.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1311545_11	428125.CLOLEP_01837	132.0	8.39e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1311545_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1311545_11	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1311545_11	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_15	phrog_87	78.8	5.9e-23	metallo-protease	other
UniRef90	UHGV-1311545_15	UniRef90_A7VVX5	280.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-1311545_15	428125.CLOLEP_02739	280.0	0	N/A	N/A
Pfam	UHGV-1311545_15	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1311545_15	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1311545_15	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_16	phrog_8	58.0	2.4e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1311545_16	UniRef90_A0A855A1Q3	176.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1311545_16	428125.CLOLEP_02738	173.0	0	SMART helix-turn-helix domain protein	N/A
Pfam	UHGV-1311545_16	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1311545_16	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1311545_16	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1311545_17	UniRef90_A0A1Y3XM81	83.6	1.01e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1311545_17	428125.CLOLEP_02737	93.2	3.32e-24	N/A	N/A
structural_annotation	UHGV-1311545_17	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_21	phrog_478	137.6	4.10006e-41	site-specific recombination directionality factor RDF	integration and excision
eggNOG-mapper	UHGV-1311545_21	665956.HMPREF1032_03082	194.0	0	N/A	N/A
PHROG	UHGV-1311545_29	phrog_862	56.1	7.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-1311545_29	1203606.HMPREF1526_00310	122.0	3.95e-32	N/A	N/A
structural_annotation	UHGV-1311545_29	PF05037,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_30	phrog_16304	123.0	3.1e-36	N/A	unknown function
UniRef90	UHGV-1311545_30	UniRef90_A0A417HNC3	155.0	9.66896e-44	N/A	N/A
eggNOG-mapper	UHGV-1311545_30	1449126.JQKL01000003_gene1705	96.7	3.52e-21	ROK family	N/A
Pfam	UHGV-1311545_30	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-1311545_30	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-1311545_30	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1311545_31	K02314	252.0	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1311545_31	phrog_19	239.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1311545_31	UniRef90_A0A6N8HZR2	336.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1311545_31	693746.OBV_27440	188.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1311545_31	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1311545_31	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1311545_31	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1311545_31	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-1311545_32	K01160	46.5	0.0000000000011	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1311545_32	phrog_140	107.4	1.4e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1311545_32	UniRef90_A0A1C6HG31	275.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1311545_32	411461.DORFOR_00015	115.0	7.41e-31	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1311545_32	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1311545_32	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1311545_32	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_35	phrog_1384	129.7	1.9e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-1311545_35	428125.CLOLEP_01816	322.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-1311545_35	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1311545_36	PF17399	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_37	phrog_2245	93.4	2.4e-27	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1311545_37	UniRef90_A0A4U9RLZ8	85.1	1.07e-19	N/A	N/A
eggNOG-mapper	UHGV-1311545_37	428125.CLOLEP_01814	179.0	0	COG NOG14118 non supervised orthologous group	N/A
structural_annotation	UHGV-1311545_37	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_48	phrog_606	43.4	0.0000000000039	terminase small subunit	head and packaging
UniRef90	UHGV-1311545_48	UniRef90_UPI001D08D6B6	128.0	7.77e-35	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1311545_48	1235793.C809_00539	63.2	0.000000000238	N/A	N/A
Pfam	UHGV-1311545_48	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1311545_48	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1311545_50	K14060	140.7	1.29998e-41	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1311545_50	phrog_125	175.1	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1311545_50	UniRef90_A0A1M5TXA4	172.0	0	Site-specific DNA recombinase	N/A
eggNOG-mapper	UHGV-1311545_50	931626.Awo_c01430	151.0	1.5134e-43	Resolvase, N terminal domain	N/A
Pfam	UHGV-1311545_50	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1311545_50	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1311545_50	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1311545_51	NF009949	N/A	N/A	N/A	N/A
Pfam	UHGV-1311545_52	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-1311545_52	PF12869,MF_00720,NF040991,COG4085	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_53	phrog_38	186.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1311545_53	UniRef90_A0A318EQM2	433.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1311545_53	1123263.AUKY01000015_gene1608	483.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1311545_53	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1311545_53	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1311545_53	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_54	phrog_64	158.2	0	portal protein	head and packaging
UniRef90	UHGV-1311545_54	UniRef90_A0A3D3Y472	315.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1311545_54	1123263.AUKY01000015_gene1609	276.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1311545_54	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1311545_54	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1311545_56	phrog_422	263.3	0	major head protein	head and packaging
eggNOG-mapper	UHGV-1311545_56	645991.Sgly_0340	232.0	0	N/A	N/A
structural_annotation	UHGV-1311545_56	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-1311545_58	UniRef90_UPI001D07B1DB	141.0	1.13996e-41	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1311545_58	936580.HMPREF1516_0716	59.7	0.000000000292	N/A	N/A
Pfam	UHGV-1311545_58	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1311545_58	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1311545_59	1232453.BAIF02000058_gene1630	69.7	0.000000000000157	N/A	N/A
eggNOG-mapper	UHGV-1311545_60	476272.RUMHYD_01963	71.6	0.00000000000027	N/A	N/A
structural_annotation	UHGV-1311545_61	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1311545_62	1121333.JMLH01000047_gene1013	176.0	0	N/A	N/A
structural_annotation	UHGV-1311545_62	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1311545_63	UniRef90_A0A843HLA7	118.0	3.98e-32	N/A	N/A
Pfam	UHGV-1311545_63	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1311545_63	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1311545_64	1121333.JMLH01000047_gene1011	57.8	0.00000000209	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1311545	Yes	36,243	45	99	1