vOTU vOTU-060754

vOTU: vOTU-060754

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-060754
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-00738 → vGENUS-00975 → vSUBGEN-22087 → vOTU-060754
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0002324
Biosample ID	SAMEA4766322
Genome length (bp)	34,602 bps
CheckV completeness	94.31% (High-quality)
CDS count	52
CDS density	93.00%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	860	Host agreement	88.72
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	22	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0002324_3	UniRef90_R6TP76	84.7	2.39e-20	RHH_1 domain-containing protein	N/A
structural_annotation	UHGV-0002324_3	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_6	phrog_263	77.1	1.4e-22	holin	lysis
UniRef90	UHGV-0002324_6	UniRef90_A0A3D5TN47	178.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0002324_6	315750.BPUM_3085	62.8	0.00000000000894	SPP1 phage holin	N/A
Pfam	UHGV-0002324_6	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0002324_6	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0002324_6	PF04688,TIGR01592	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_7	phrog_9428	120.6	4.1e-37	N/A	unknown function
UniRef90	UHGV-0002324_7	UniRef90_A0A3D5TMQ6	154.0	1.4013e-45	Serine/threonine protein kinase	N/A
eggNOG-mapper	UHGV-0002324_7	1519439.JPJG01000059_gene1948	111.0	5.72e-30	N/A	N/A
KOfam	UHGV-0002324_8	K01448	116.3	3.3e-34	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0002324_8	phrog_435	154.4	1.4013e-45	endolysin	lysis
UniRef90	UHGV-0002324_8	UniRef90_A0A3D5TMB6	571.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0002324_8	1203606.HMPREF1526_00346	96.3	1.83e-20	Ami_3	N/A
Pfam	UHGV-0002324_8	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0002324_8	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0002324_8	PF01520,PF15591,MF_00562,TIGR02883,NF033202,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_9	phrog_27545	86.8	2.7e-25	N/A	unknown function
UniRef90	UHGV-0002324_9	UniRef90_R6ELD6	80.9	9.2e-17	Glycosyl hydrolase family 18 family protein	N/A
eggNOG-mapper	UHGV-0002324_9	411471.SUBVAR_06976	84.3	8.46e-19	N/A	N/A
UniRef90	UHGV-0002324_11	UniRef90_UPI001956EB51	71.6	0.0000000000268	leucine-rich repeat protein	N/A
Pfam	UHGV-0002324_11	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
structural_annotation	UHGV-0002324_11	PF13306	N/A	N/A	N/A	N/A
KOfam	UHGV-0002324_12	K19479	46.3	0.00000000000028	COL10A; collagen type X alpha	N/A
PHROG	UHGV-0002324_12	phrog_11541	89.5	2.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0002324_12	1469948.JPNB01000002_gene4082	94.0	9.25e-18	GDSL-like Lipase/Acylhydrolase	N/A
Pfam	UHGV-0002324_12	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0002324_12	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0002324_12	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0002324_14	phrog_1067	354.7	0	minor head protein	head and packaging
UniRef90	UHGV-0002324_14	UniRef90_R6GLF8	345.0	0	Phage minor structural protein region	N/A
eggNOG-mapper	UHGV-0002324_14	1160721.RBI_I01574	320.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0002324_14	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0002324_14	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0002324_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0002324_14	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_15	phrog_33	65.6	1.3e-18	distal tail protein Dit	tail
UniRef90	UHGV-0002324_15	UniRef90_UPI00164BA811	138.0	1.26e-36	phage tail family protein	N/A
eggNOG-mapper	UHGV-0002324_15	1444306.JFZC01000034_gene2623	150.0	3.30006e-42	tail component	N/A
COG	UHGV-0002324_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0002324_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_16	phrog_58	97.1	3.6e-35	tail length tape measure protein	tail
UniRef90	UHGV-0002324_16	UniRef90_A0A316QKN8	284.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0002324_16	1230342.CTM_17027	275.0	0	tape measure	N/A
COG	UHGV-0002324_16	COG5185	N/A	N/A	Chromosome segregation protein NDC80, interacts with SMC proteins	N/A
structural_annotation	UHGV-0002324_16	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002324_17	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_18	phrog_88	79.1	5.6e-23	major tail protein	tail
UniRef90	UHGV-0002324_18	UniRef90_UPI001D07B441	135.0	1.18e-36	major tail protein	N/A
eggNOG-mapper	UHGV-0002324_18	411459.RUMOBE_00930	123.0	9.85e-33	N/A	N/A
NCBIFam	UHGV-0002324_18	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0002324_18	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_19	phrog_78	52.7	0.0000000000000082	tail terminator	connector
eggNOG-mapper	UHGV-0002324_19	1238184.CM001792_gene2512	67.0	0.000000000000734	N/A	N/A
structural_annotation	UHGV-0002324_19	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_20	phrog_5	42.7	0.000000000011	tail completion or Neck1 protein	connector
UniRef90	UHGV-0002324_20	UniRef90_A0A174CK72	98.6	1.39e-23	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0002324_20	1195236.CTER_5108	87.8	3.33e-20	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0002324_20	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_21	phrog_1951	47.8	0.00000000000024	head-tail adaptor	connector
eggNOG-mapper	UHGV-0002324_21	457396.CSBG_01051	53.5	0.0000000801	head-tail adaptor	N/A
Pfam	UHGV-0002324_21	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
COG	UHGV-0002324_21	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
UniRef90	UHGV-0002324_22	UniRef90_UPI0006544DF9	52.0	0.00000095	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0002324_22	1274524.BSONL12_06143	51.2	0.000000511	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0002324_22	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0002324_22	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0002324_22	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_23	phrog_10	159.8	0	major head protein	head and packaging
UniRef90	UHGV-0002324_23	UniRef90_UPI000C7BECD8	314.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0002324_23	1414720.CBYM010000002_gene572	240.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0002324_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0002324_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0002324_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0002324_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_24	phrog_16951	255.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0002324_24	246199.CUS_7602	191.0	0	N/A	N/A
structural_annotation	UHGV-0002324_24	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_25	phrog_12	272.4	0	portal protein	head and packaging
UniRef90	UHGV-0002324_25	UniRef90_UPI001C11FE4E	489.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0002324_25	634956.Geoth_0787	431.0	0	Phage portal protein	N/A
Pfam	UHGV-0002324_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0002324_25	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0002324_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0002324_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_26	phrog_9	330.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0002324_26	UniRef90_UPI000C7CE66A	719.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0002324_26	742738.HMPREF9460_04067	650.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0002324_26	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0002324_26	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0002324_26	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0002324_26	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_27	phrog_83	83.6	2.5e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0002324_27	UniRef90_UPI00067FA7FA	135.0	1.54e-37	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0002324_27	1567013.A0A0A7S0C4_9CAUD	132.0	3.31e-37	Phage terminase, small subunit	N/A
Pfam	UHGV-0002324_27	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0002324_27	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
structural_annotation	UHGV-0002324_27	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0002324_28	K07451	48.7	0.00000000000014	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0002324_28	phrog_144	107.0	1.5e-31	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002324_28	UniRef90_UPI0006D7C695	94.4	3.45e-22	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0002324_28	1508644.SFBmNL_01550	88.2	9.02e-21	HNH endonuclease	N/A
Pfam	UHGV-0002324_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0002324_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0002324_28	PF05766	N/A	N/A	N/A	N/A
KOfam	UHGV-0002324_29	K00571	160.2	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0002324_29	phrog_18293	164.2	0	methyltransferase	other
UniRef90	UHGV-0002324_29	UniRef90_UPI000A26DFF4	325.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0002324_29	1120998.AUFC01000030_gene2227	311.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0002324_29	MTase_II_00037	144.0	0	Type II methyltransferase	RM
Pfam	UHGV-0002324_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0002324_29	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0002324_29	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_30	phrog_11237	77.5	1.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0002324_30	537013.CLOSTMETH_01096	58.9	0.00000000209	N/A	N/A
structural_annotation	UHGV-0002324_30	TIGR01636	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0002324_31	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
PHROG	UHGV-0002324_32	phrog_3584	130.3	1.2e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0002324_32	537013.CLOSTMETH_02141	79.3	0.00000000000000229	N/A	N/A
structural_annotation	UHGV-0002324_32	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_33	phrog_24518	48.1	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0002324_33	693746.OBV_25370	80.1	3.74e-16	N/A	N/A
eggNOG-mapper	UHGV-0002324_34	1235790.C805_00069	66.2	0.000000000000351	Restriction alleviation protein Lar	N/A
KOfam	UHGV-0002324_39	K03497	146.5	3.09687e-43	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0002324_39	phrog_6218	248.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002324_39	UniRef90_A0A3D1I1E6	766.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0002324_39	445972.ANACOL_00162	259.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0002324_39	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0002324_39	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0002324_39	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0002324_39	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_40	phrog_824	133.0	1e-39	N/A	unknown function
UniRef90	UHGV-0002324_40	UniRef90_A0A3D5TLJ2	324.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0002324_40	1235792.C808_00075	140.0	7.14e-39	VRR_NUC	N/A
Pfam	UHGV-0002324_40	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0002324_40	PF08774,COG1996	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_43	phrog_22040	40.1	0.000000000052	N/A	unknown function
structural_annotation	UHGV-0002324_43	PF07073,COG4568	N/A	N/A	N/A	N/A
KOfam	UHGV-0002324_46	K01449	59.0	7.2e-17	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0002324_46	phrog_18750	151.0	8.40779e-45	N/A	unknown function
UniRef90	UHGV-0002324_46	UniRef90_A0A3D5TM41	217.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0002324_46	1203606.HMPREF1526_01876	143.0	1.60999e-40	Cell wall hydrolase	N/A
Pfam	UHGV-0002324_46	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0002324_46	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0002324_46	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0002324_48	phrog_6058	46.1	0.0000000000005	N/A	unknown function
eggNOG-mapper	UHGV-0002324_48	693746.OBV_19810	48.9	0.00000825	N/A	N/A
UniRef90	UHGV-0002324_49	UniRef90_A0A7X5KPU5	63.9	0.00000000000632	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0002324_49	484770.UFO1_1664	55.5	0.00000000188	N/A	N/A
Pfam	UHGV-0002324_49	PF02954	N/A	N/A	Bacterial regulatory protein, Fis family	HTH_8
structural_annotation	UHGV-0002324_49	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0002324_50	K01356	105.6	7.3e-31	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0002324_50	phrog_4	123.5	2.1e-36	transcriptional repressor	transcription regulation
UniRef90	UHGV-0002324_50	UniRef90_R5L1M5	233.0	0	DNA-binding helix-turn-helix / peptidase S24-like multi-domain protein	N/A
eggNOG-mapper	UHGV-0002324_50	320839.Q4ZCJ1_9CAUD	119.0	9.37e-31	sequence-specific DNA binding	N/A
Pfam	UHGV-0002324_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0002324_50	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
structural_annotation	UHGV-0002324_50	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002324_51	PF08797,TIGR00086	N/A	N/A	N/A	N/A
KOfam	UHGV-0002324_52	K14059	159.2	0	int; integrase	N/A
PHROG	UHGV-0002324_52	phrog_1	190.5	0	integrase	integration and excision
UniRef90	UHGV-0002324_52	UniRef90_A0A7K4BXA9	291.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0002324_52	693746.OBV_19730	268.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0002324_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0002324_52	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0002324_52	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0002324	Yes	34,602	51	94	1