vOTU vOTU-060793

vOTU: vOTU-060793

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-060793
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01067 → vGENUS-01090 → vSUBGEN-04555 → vOTU-060793
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1509162
Biosample ID	N/A
Genome length (bp)	35,980 bps
CheckV completeness	90.52% (High-quality)
CDS count	41
CDS density	96.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans	Total connections	222	Host agreement	94.59
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Roseburia → Roseburia inulinivorans	Total connections	33	Host agreement	87.88

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.52)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1509162_2	phrog_1419	71.2	7.5e-21	tail protein	tail
UniRef90	UHGV-1509162_2	UniRef90_A0A1I0BH39	216.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1509162_2	397288.C806_02170	75.9	0.000000000000628	N/A	N/A
Pfam	UHGV-1509162_2	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-1509162_3	phrog_22978	573.8	0	N/A	unknown function
UniRef90	UHGV-1509162_3	UniRef90_A0A396KH15	591.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509162_3	1410650.JHWL01000003_gene2814	613.0	0	N/A	N/A
Pfam	UHGV-1509162_3	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
PHROG	UHGV-1509162_4	phrog_21397	62.0	8.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-1509162_4	1410650.JHWL01000003_gene2815	131.0	1.17e-31	N/A	N/A
PHROG	UHGV-1509162_6	phrog_511	264.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1509162_6	1410650.JHWL01000003_gene2827	314.0	0	N/A	N/A
structural_annotation	UHGV-1509162_6	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_7	phrog_12105	112.4	2.5e-33	N/A	unknown function
eggNOG-mapper	UHGV-1509162_7	1226322.HMPREF1545_03850	68.6	0.000000000000435	N/A	N/A
PHROG	UHGV-1509162_8	phrog_15239	56.5	1.4e-16	N/A	unknown function
PHROG	UHGV-1509162_9	phrog_1357	256.2	0	major head protein	head and packaging
UniRef90	UHGV-1509162_9	UniRef90_A0A3R6PQZ4	402.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1509162_9	718252.FP2_29220	350.0	0	N/A	N/A
NCBIFam	UHGV-1509162_9	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1509162_9	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_10	phrog_13908	272.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1509162_10	1410650.JHWL01000003_gene2831	102.0	2.7e-22	N/A	N/A
KOfam	UHGV-1509162_11	K07584	71.9	1e-20	N/A	N/A
PHROG	UHGV-1509162_11	phrog_4478	79.9	2e-23	peptidase	other
UniRef90	UHGV-1509162_11	UniRef90_A0A7X8QR99	64.7	0.0000000000382	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1509162_11	1347392.CCEZ01000026_gene2980	57.0	0.00000000587	Cysteine protease Prp	N/A
Pfam	UHGV-1509162_11	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1509162_11	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509162_11	NF011130,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_12	phrog_156	328.5	0	portal protein	head and packaging
UniRef90	UHGV-1509162_12	UniRef90_A0A8D9UH10	508.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1509162_12	748224.HMPREF9436_01396	521.0	0	N/A	N/A
structural_annotation	UHGV-1509162_12	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-1509162_13	K06909	93.6	2.5e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1509162_13	phrog_979	207.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1509162_13	UniRef90_A0A2V2D4K5	690.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1509162_13	411483.FAEPRAA2165_01044	667.0	0	Terminase-like family	N/A
Pfam	UHGV-1509162_13	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1509162_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1509162_13	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1509162_14	K07474	101.2	1.8e-29	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1509162_14	phrog_2606	172.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-1509162_14	UniRef90_A0A4P9C628	162.0	1.4013e-45	Phage portal protein	N/A
eggNOG-mapper	UHGV-1509162_14	748727.CLJU_c00350	143.0	4.79e-38	terminase, small subunit	N/A
Pfam	UHGV-1509162_14	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-1509162_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1509162_14	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1509162_14	PF03592,PF06056,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_16	phrog_24386	342.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1509162_16	742740.HMPREF9474_02291	293.0	0	phosphatase activity	N/A
COG	UHGV-1509162_16	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
structural_annotation	UHGV-1509162_16	TIGR01689	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509162_17	UniRef90_A0A6L9HMX6	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-1509162_17	585394.RHOM_04340	280.0	0	N/A	N/A
Pfam	UHGV-1509162_17	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-1509162_17	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509162_23	PF09889,COG4068	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509162_24	UniRef90_UPI00164A90AD	123.0	1.44e-33	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1509162_24	1235800.C819_02254	110.0	3.62e-29	HNH nucleases	N/A
PHROG	UHGV-1509162_25	phrog_15077	101.8	1.1e-29	N/A	unknown function
UniRef90	UHGV-1509162_25	UniRef90_A0A174WLY0	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-1509162_25	1280698.AUJS01000007_gene1019	221.0	0	N/A	N/A
structural_annotation	UHGV-1509162_25	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_26	phrog_8470	222.5	0	N/A	unknown function
UniRef90	UHGV-1509162_26	UniRef90_UPI000E4BB21C	649.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1509162_26	411459.RUMOBE_01776	315.0	0	N/A	N/A
Pfam	UHGV-1509162_26	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1509162_26	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_27	phrog_4433	84.8	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1509162_27	742738.HMPREF9460_01792	123.0	3.99e-33	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1509162_27	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1509162_27	PF12120,NF000318	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509162_28	1280698.AUJS01000007_gene1016	147.0	6.40393e-43	N/A	N/A
KOfam	UHGV-1509162_29	K03469	56.1	8e-16	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1509162_29	phrog_531	53.8	0.0000000000000033	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509162_29	UniRef90_A0A1Q6KIM6	279.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509162_29	1120963.KB894491_gene1009	56.2	0.0000000744	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1509162_29	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1509162_29	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1509162_29	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_30	phrog_3584	141.7	2.40042e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1509162_30	1235800.C819_02258	259.0	0	N/A	N/A
structural_annotation	UHGV-1509162_30	PF21578,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509162_33	PF07408,MF_01560,TIGR00029,COG0268	N/A	N/A	N/A	N/A
PHROG	UHGV-1509162_35	phrog_6058	65.0	7.3e-19	N/A	unknown function
UniRef90	UHGV-1509162_35	UniRef90_A0A0V8QBN7	68.9	0.000000000000263	Histone-lysine N-methyltransferase	N/A
eggNOG-mapper	UHGV-1509162_35	428125.CLOLEP_01347	69.3	0.000000000000026	N/A	N/A
structural_annotation	UHGV-1509162_35	PF12728,NF040990	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509162_36	411468.CLOSCI_00322	46.6	0.00000227	N/A	N/A
KOfam	UHGV-1509162_37	K18830	68.6	3.9e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1509162_37	phrog_2967	52.3	0.0000000000000049	transcriptional regulator	transcription regulation
UniRef90	UHGV-1509162_37	UniRef90_A0A1Q6KH79	193.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1509162_37	1235793.C809_03587	158.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1509162_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1509162_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1509162_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1509162_39	K07729	49.6	0.000000000000078	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1509162_39	phrog_3	42.9	0.000000000015	transcriptional repressor	transcription regulation
UniRef90	UHGV-1509162_39	UniRef90_A0A1Q6KGJ8	108.0	5.26e-29	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1509162_39	411470.RUMGNA_00189	91.7	3.12e-23	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1509162_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
eggNOG-mapper	UHGV-1509162_40	1163671.JAGI01000002_gene1685	58.5	0.000000257	Flagellar rod assembly protein muramidase FlgJ	N/A
NCBIFam	UHGV-1509162_40	NF033223.2	N/A	N/A	YHYH domain-containing protein	N/A
COG	UHGV-1509162_40	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
KOfam	UHGV-1509162_41	K14059	111.0	1.9e-32	int; integrase	N/A
PHROG	UHGV-1509162_41	phrog_1	127.5	1.3e-37	integrase	integration and excision
UniRef90	UHGV-1509162_41	UniRef90_UPI00093149AF	313.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1509162_41	585394.RHOM_14030	269.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1509162_41	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1509162_41	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1509162_41	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1509162	Yes	35,980	40	91	1
UHGV-2121470	No	33,046	41	83	1