vOTU vOTU-061013

vOTU: vOTU-061013

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061013
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00118 → vSUBFAM-01766 → vGENUS-08034 → vSUBGEN-07216 → vOTU-061013
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → Borkfalkiaceae → HGM11416 → ERR7803603_bin.335
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0025420
Biosample ID	SAMEA4766131
Genome length (bp)	51,416 bps
CheckV completeness	97.80% (High-quality)
CDS count	86
CDS density	93.00%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → Borkfalkiaceae → HGM11416 → ERR7803603_bin.335	Total connections	9	Host agreement	88.89
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.8)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0025420_1	phrog_27197	120.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0025420_1	394503.Ccel_3068	62.8	0.000000000339	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0025420_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0025420_1	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_2	phrog_674	145.3	4.30199e-43	N/A	unknown function
UniRef90	UHGV-0025420_2	UniRef90_A0A174S425	99.8	2.09e-20	N/A	N/A
eggNOG-mapper	UHGV-0025420_2	1121441.AUCX01000014_gene537	96.7	2.21e-20	N/A	N/A
Pfam	UHGV-0025420_2	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0025420_2	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_3	K07455	155.8	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0025420_3	phrog_148	160.7	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_3	UniRef90_A0A7G5N2X4	247.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0025420_3	1211844.CBLM010000016_gene1512	206.0	0	RecT family	N/A
Pfam	UHGV-0025420_3	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0025420_3	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0025420_3	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0025420_3	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_7	phrog_8684	80.5	1.4e-28	N/A	unknown function
UniRef90	UHGV-0025420_7	UniRef90_A0A3N9TQP2	106.0	4.51e-27	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0025420_7	1121097.JCM15093_2710	95.1	1.94e-23	YopX protein	N/A
Pfam	UHGV-0025420_7	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0025420_7	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0025420_7	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025420_9	886882.PPSC2_p0520	68.6	0.000000000000064	N/A	N/A
PHROG	UHGV-0025420_11	phrog_3136	110.4	1e-32	N/A	unknown function
UniRef90	UHGV-0025420_11	UniRef90_UPI001CBCD733	167.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0025420_11	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0025420_11	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_12	phrog_8684	57.5	2.6e-16	N/A	unknown function
UniRef90	UHGV-0025420_12	UniRef90_A0A212JSX6	74.7	0.0000000000000113	YopX domain-containing protein	N/A
Pfam	UHGV-0025420_20	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0025420_20	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0025420_20	COG0789	N/A	N/A	DNA-binding transcriptional regulator, MerR family	N/A
KOfam	UHGV-0025420_21	K03111	141.6	8.59977e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0025420_21	phrog_44	132.1	4.3e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_21	UniRef90_R7FWV6	141.0	1.35e-40	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0025420_21	796940.HMPREF9628_00166	110.0	2.98e-29	Single-strand binding protein family	N/A
Pfam	UHGV-0025420_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0025420_21	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0025420_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0025420_21	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0025420_22	PF16362	N/A	N/A	N/A	N/A
UniRef90	UHGV-0025420_23	UniRef90_A0A7C6UUX4	73.2	0.0000000000000057	N/A	N/A
eggNOG-mapper	UHGV-0025420_23	1227349.C170_11270	71.6	0.00000000000000474	N/A	N/A
structural_annotation	UHGV-0025420_23	PF16475,MF_00436,NF033216,COG1923	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_26	K00390	46.2	0.0000000000007	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0025420_26	phrog_424	54.4	0.0000000000000025	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0025420_26	UniRef90_A0A3A8WPC0	150.0	7.31478e-43	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0025420_26	913865.DOT_0576	133.0	3.64e-36	N/A	N/A
Pfam	UHGV-0025420_26	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0025420_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0025420_27	phrog_424	57.8	1.8e-16	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0025420_27	UniRef90_G9RV39	185.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0025420_27	665956.HMPREF1032_00140	185.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0025420_27	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0025420_27	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
KOfam	UHGV-0025420_28	K00571	133.3	2.5e-39	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0025420_28	phrog_67	129.0	3.3e-39	DNA methyltransferase	other
UniRef90	UHGV-0025420_28	UniRef90_A0A3N4VUU2	303.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0025420_28	877240.E1AC06_9CAUD	127.0	2.06e-33	helicase activity	N/A
PADLOC	UHGV-0025420_28	MTase_II_00157	133.6	2.29999e-40	Type II methyltransferase	RM
Pfam	UHGV-0025420_28	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-0025420_28	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_29	phrog_5968	102.7	2.3e-30	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_29	UniRef90_A0A1Q6LC25	140.0	9.26e-37	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0025420_29	718252.FP2_01000	158.0	2.38221e-44	N/A	N/A
Pfam	UHGV-0025420_29	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0025420_29	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0025420_29	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0025420_29	PF09681,TIGR01714	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_30	K02315	109.6	4e-32	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0025420_30	phrog_50	104.3	1.5e-30	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_30	UniRef90_A0A3D0LZW1	203.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-0025420_30	1507.HMPREF0262_00302	177.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-0025420_30	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0025420_30	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0025420_30	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025420_33	PF18892	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_37	K01160	52.6	0.000000000000013	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0025420_37	phrog_34	56.7	5e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_37	UniRef90_A0A892AQS8	138.0	1.22e-39	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0025420_37	525919.Apre_0813	129.0	4.93e-37	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0025420_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0025420_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0025420_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0025420_41	1378168.N510_03079	61.6	0.00000000914	N/A	N/A
structural_annotation	UHGV-0025420_42	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_43	phrog_16490	104.6	8.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0025420_43	476272.RUMHYD_01770	115.0	4.64e-29	N/A	N/A
structural_annotation	UHGV-0025420_46	PF08281,NF001067,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_53	K10450	42.1	0.0000000000059	KLHL12, C3IP1; kelch-like protein 12	N/A
UniRef90	UHGV-0025420_53	UniRef90_A0A1F2PCN2	104.0	3.75e-20	Kelch motif protein	N/A
Pfam	UHGV-0025420_53	PF01344	N/A	N/A	Kelch motif	Kelch_1
PHROG	UHGV-0025420_56	phrog_37900	79.4	1.7e-24	N/A	unknown function
UniRef90	UHGV-0025420_56	UniRef90_UPI00164D57E4	152.0	5.43e-39	N/A	N/A
eggNOG-mapper	UHGV-0025420_56	931626.Awo_c11420	160.0	2.44e-40	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0025420_56	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0025420_56	COG3209	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_58	K17256	42.9	0.0000000000028	IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit	N/A
PHROG	UHGV-0025420_58	phrog_35892	106.0	4.1002e-42	N/A	unknown function
Pfam	UHGV-0025420_58	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-0025420_58	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-0025420_58	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0025420_65	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_70	phrog_29	163.0	0	major head protein	head and packaging
UniRef90	UHGV-0025420_70	UniRef90_A0A2K9P3U0	241.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0025420_70	1232443.BAIA02000078_gene29	224.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0025420_70	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0025420_70	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_73	phrog_64	116.1	2.3e-34	portal protein	head and packaging
UniRef90	UHGV-0025420_73	UniRef90_UPI001BAB50B9	184.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0025420_73	1121866.AUGK01000003_gene1429	136.0	1.14e-31	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0025420_73	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0025420_73	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_74	phrog_144	49.6	0.000000000000083	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_74	UniRef90_A0A0F9C7D9	56.2	0.0000000404	HNH domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0025420_74	1237149.C900_03881	50.8	0.00000516	HNH nucleases	N/A
Pfam	UHGV-0025420_74	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0025420_77	phrog_38	111.0	1.1e-32	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-0025420_77	428127.EUBDOL_01551	133.0	1.71e-31	chromosome segregation	N/A
NCBIFam	UHGV-0025420_77	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0025420_77	COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0025420_83	K03466	202.6	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0025420_83	phrog_1358	175.2	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0025420_83	UniRef90_A0A2E8BVL4	174.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-0025420_83	717231.Flexsi_2302	165.0	5.53513e-43	Ftsk_gamma	N/A
PADLOC	UHGV-0025420_83	SspH_00002	97.0	1.2e-28	SspH	SSP
Pfam	UHGV-0025420_83	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-0025420_83	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0025420_83	PF01580,PF17854,MF_01076,NF041214,COG0433	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_85	phrog_434	117.7	1.3e-34	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0025420_85	UniRef90_A0A412YTC0	137.0	1.34e-36	Recombinase	N/A
eggNOG-mapper	UHGV-0025420_85	742740.HMPREF9474_03486	132.0	1.82e-35	YqaJ viral recombinase family	N/A
Pfam	UHGV-0025420_85	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0025420_85	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0025420_85	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0025420_85	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0025420_86	phrog_4433	191.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0025420_86	573061.Clocel_3578	112.0	6.04e-27	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0025420_86	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0025420_86	NF000318	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0025420	Yes	51,416	40	98	1