vOTU vOTU-061044

vOTU: vOTU-061044

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061044
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01064 → vGENUS-01079 → vSUBGEN-43325 → vOTU-061044
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0006587
Biosample ID	SAMEA4765921
Genome length (bp)	31,034 bps
CheckV completeness	95.70% (High-quality)
CDS count	43
CDS density	94.45%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488	Total connections	83	Host agreement	98.8
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-488	Total connections	25	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0006587_1	K01448	70.9	1.6e-20	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0006587_1	phrog_435	89.4	4.5e-26	endolysin	lysis
UniRef90	UHGV-0006587_1	UniRef90_A0A810PUG7	227.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0006587_1	994573.T472_0202030	86.3	2.65e-17	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0006587_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0006587_1	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0006587_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0006587_1	PF01520,PF01471,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_2	phrog_263	75.9	3.4e-22	holin	lysis
UniRef90	UHGV-0006587_2	UniRef90_A0A350XYL1	137.0	1.46e-40	Holin	N/A
eggNOG-mapper	UHGV-0006587_2	458233.MCCL_1512	62.4	0.0000000000123	SPP1 phage holin	N/A
Pfam	UHGV-0006587_2	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0006587_2	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0006587_2	PF04688,TIGR01592	N/A	N/A	N/A	N/A
KOfam	UHGV-0006587_5	K03651	43.2	0.0000000000048	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
Pfam	UHGV-0006587_5	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
PHROG	UHGV-0006587_8	phrog_1067	300.8	0	minor head protein	head and packaging
UniRef90	UHGV-0006587_8	UniRef90_A0A413DNC1	291.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0006587_8	1160721.RBI_I01574	284.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0006587_8	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0006587_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0006587_8	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0006587_9	phrog_33	62.4	1.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-0006587_9	UniRef90_R6GVG8	107.0	1.36e-24	Phage putative tail component N-domain protein	N/A
eggNOG-mapper	UHGV-0006587_9	1160721.RBI_I01575	114.0	5.41e-28	Phage tail protein	N/A
NCBIFam	UHGV-0006587_9	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0006587_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0006587_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_10	phrog_6900	255.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0006587_10	UniRef90_A0A373CK98	289.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-0006587_10	411470.RUMGNA_02076	289.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0006587_10	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0006587_10	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006587_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_12	phrog_88	82.7	3.8e-24	major tail protein	tail
UniRef90	UHGV-0006587_12	UniRef90_A5ZPL3	105.0	1.12e-24	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0006587_12	411459.RUMOBE_00930	105.0	1.88e-25	N/A	N/A
NCBIFam	UHGV-0006587_12	TIGR01603.1	N/A	N/A	major tail protein	N/A
eggNOG-mapper	UHGV-0006587_13	203119.Cthe_1624	51.6	0.00000079	N/A	N/A
structural_annotation	UHGV-0006587_13	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006587_14	UniRef90_A0A174CK72	87.0	4.37e-19	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0006587_14	97139.C824_05967	77.0	4.46e-16	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0006587_14	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_15	phrog_1951	65.5	6e-19	head-tail adaptor	connector
COG	UHGV-0006587_15	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0006587_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_16	phrog_5223	65.3	6.2e-19	neck protein	connector
UniRef90	UHGV-0006587_16	UniRef90_B6W9Y5	62.4	0.000000000128	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0006587_16	561177.ANHYDRO_01411	62.4	0.0000000000215	N/A	N/A
structural_annotation	UHGV-0006587_16	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_17	phrog_10	65.3	7e-19	major head protein	head and packaging
UniRef90	UHGV-0006587_17	UniRef90_A0A1C5W5F9	349.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0006587_17	742740.HMPREF9474_04304	387.0	0	Phage capsid family	N/A
Pfam	UHGV-0006587_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0006587_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0006587_17	PF05065,PF09032,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0006587_18	K06904	83.9	2.3e-24	N/A	N/A
PHROG	UHGV-0006587_18	phrog_80	97.2	2.2e-28	head maturation protease	head and packaging
UniRef90	UHGV-0006587_18	UniRef90_A0A2V2GKJ3	253.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0006587_18	1321814.HMPREF9089_00929	194.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0006587_18	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0006587_18	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0006587_18	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_19	phrog_12	113.9	1.1e-33	portal protein	head and packaging
UniRef90	UHGV-0006587_19	UniRef90_A0A2V2GK98	479.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0006587_19	742740.HMPREF9474_04306	367.0	0	Phage portal protein	N/A
Pfam	UHGV-0006587_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0006587_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0006587_19	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_20	phrog_9	339.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0006587_20	UniRef90_C9LCN6	810.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0006587_20	411470.RUMGNA_02062	810.0	0	N/A	N/A
Pfam	UHGV-0006587_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0006587_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0006587_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0006587_20	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_21	phrog_1066	102.2	3.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0006587_21	397290.C810_00417	129.0	3.24e-37	N/A	N/A
structural_annotation	UHGV-0006587_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006587_22	UniRef90_A0A350U006	92.0	4.06e-22	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0006587_22	1203606.HMPREF1526_00983	112.0	4.77e-31	HNH endonuclease	N/A
COG	UHGV-0006587_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0006587_23	PF09055	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_24	phrog_11237	61.8	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0006587_24	1235798.C817_02584	56.2	0.0000000353	N/A	N/A
PHROG	UHGV-0006587_25	phrog_824	122.0	2.5e-36	N/A	unknown function
UniRef90	UHGV-0006587_25	UniRef90_R6DT92	261.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0006587_25	1414720.CBYM010000002_gene588	120.0	1.31e-33	VRR-NUC domain	N/A
Pfam	UHGV-0006587_25	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0006587_25	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_26	phrog_3584	167.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0006587_26	561177.ANHYDRO_01389	108.0	1.91e-25	N/A	N/A
structural_annotation	UHGV-0006587_26	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_33	phrog_15609	198.4	0	N/A	unknown function
UniRef90	UHGV-0006587_33	UniRef90_UPI001C12751D	129.0	1.22e-31	N/A	N/A
eggNOG-mapper	UHGV-0006587_33	1501230.ET33_21155	133.0	1.25e-33	N/A	N/A
Pfam	UHGV-0006587_33	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0006587_33	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0006587_33	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_34	phrog_8470	240.3	0	N/A	unknown function
UniRef90	UHGV-0006587_34	UniRef90_UPI0019580896	346.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0006587_34	1226322.HMPREF1545_00100	285.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0006587_34	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0006587_34	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_35	phrog_36399	72.6	5.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0006587_35	1226322.HMPREF1545_00099	62.8	0.0000000000345	N/A	N/A
UniRef90	UHGV-0006587_36	UniRef90_A0A3D1LDL3	62.8	0.0000000000507	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0006587_36	1235797.C816_00778	57.0	0.00000000143	TIGRFAM DNA binding domain, excisionase family	N/A
UniRef90	UHGV-0006587_37	UniRef90_UPI0005B296BA	67.4	0.000000000000209	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0006587_37	1347392.CCEZ01000005_gene1206	67.4	0.0000000000000351	N/A	N/A
structural_annotation	UHGV-0006587_37	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0006587_38	K07727	41.0	0.00000000004	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0006587_38	phrog_8	41.7	0.00000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0006587_38	UniRef90_UPI00164B50E0	112.0	5.86e-29	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0006587_38	1235793.C809_00679	52.4	0.000000866	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0006587_38	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0006587_38	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0006587_39	phrog_1914	105.5	2.4e-32	N/A	unknown function
UniRef90	UHGV-0006587_39	UniRef90_R6DVV5	271.0	0	Predicted Zn peptidase	N/A
eggNOG-mapper	UHGV-0006587_39	1160721.RBI_I01604	140.0	1.18e-39	N/A	N/A
Pfam	UHGV-0006587_39	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0006587_39	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0006587_39	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0006587_40	K02342	112.2	4.6e-33	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0006587_40	phrog_192	114.6	6.4e-34	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006587_40	UniRef90_UPI00145AEB3D	224.0	0	DNA polymerase III	N/A
eggNOG-mapper	UHGV-0006587_40	748727.CLJU_c36230	165.0	7.00649e-45	3' exoribonuclease, RNase T-like	N/A
PADLOC	UHGV-0006587_40	cd06127	83.6	3.3e-24	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0006587_40	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0006587_40	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0006587_40	COG0847	N/A	N/A	DNA polymerase III, epsilon subunit or related 3'-5' exonuclease	N/A
structural_annotation	UHGV-0006587_40	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0006587_41	1232453.BAIF02000097_gene2773	55.1	0.00000154	EXOIII	N/A
COG	UHGV-0006587_41	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
KOfam	UHGV-0006587_42	K14059	269.8	0	int; integrase	N/A
PHROG	UHGV-0006587_42	phrog_1	200.1	0	integrase	integration and excision
UniRef90	UHGV-0006587_42	UniRef90_A0A413G0Q9	348.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0006587_42	641112.ACOK01000036_gene788	324.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0006587_42	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0006587_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0006587_42	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0006587_42	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0006587_43	K18843	55.9	9.5e-16	hicB; antitoxin HicB	N/A
PHROG	UHGV-0006587_43	phrog_497	72.9	5.3e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0006587_43	UniRef90_R6GVF3	201.0	0	HicB-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0006587_43	397288.C806_02660	165.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0006587_43	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0006587_43	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0006587_43	PF15919,COG1598	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0006587	Yes	31,034	43	96	1
UHGV-0010833	No	27,679	43	85	1
UHGV-0016302	No	19,271	44	59	1
UHGV-0018307	No	16,875	44	52	1
UHGV-1611978	No	10,576	45	33	1