vOTU vOTU-061566

vOTU: vOTU-061566

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061566
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01395 → vGENUS-02189 → vSUBGEN-13087 → vOTU-061566
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0034346
Biosample ID	SAMEA4765706
Genome length (bp)	41,200 bps
CheckV completeness	98.59% (High-quality)
CDS count	61
CDS density	91.70%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	26	Host agreement	92.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0034346_1	K03646	43.3	0.0000000000067	tolA; colicin import membrane protein	N/A
eggNOG-mapper	UHGV-0034346_1	877414.ATWA01000062_gene1616	88.6	8.96e-16	N/A	N/A
structural_annotation	UHGV-0034346_1	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_3	phrog_2310	54.4	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0034346_3	1151292.QEW_0364	47.0	0.00000204	N/A	N/A
PHROG	UHGV-0034346_5	phrog_2295	59.7	3.5e-19	N/A	unknown function
Pfam	UHGV-0034346_5	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0034346_5	PF14686,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_6	phrog_13141	47.3	0.00000000000022	N/A	unknown function
PHROG	UHGV-0034346_7	phrog_156	108.9	1.4e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0034346_7	693746.OBV_01670	511.0	0	N/A	N/A
structural_annotation	UHGV-0034346_7	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_9	phrog_422	111.9	5e-33	major head protein	head and packaging
UniRef90	UHGV-0034346_9	UniRef90_A0A6A8VJ17	256.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0034346_9	1408437.JNJN01000001_gene1710	176.0	0	N/A	N/A
Pfam	UHGV-0034346_9	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0034346_9	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0034346_11	K06909	143.2	2.10055e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0034346_11	phrog_979	117.5	1.8e-36	terminase large subunit	head and packaging
UniRef90	UHGV-0034346_11	UniRef90_A0A1Y3RJJ5	444.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_11	693746.OBV_01690	431.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0034346_11	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0034346_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
UniRef90	UHGV-0034346_12	UniRef90_UPI0001B2B2BE	56.6	0.00000000209	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_12	397290.C810_03591	53.1	0.00000000882	Cysteine-rich KTR	N/A
Pfam	UHGV-0034346_12	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0034346_14	PF08681	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_16	phrog_15863	48.6	1e-20	N/A	unknown function
UniRef90	UHGV-0034346_16	UniRef90_UPI00068FC51E	369.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_16	1519439.JPJG01000053_gene1369	369.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0034346_16	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-0034346_16	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
eggNOG-mapper	UHGV-0034346_18	693746.OBV_01590	314.0	0	N/A	N/A
Pfam	UHGV-0034346_18	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
eggNOG-mapper	UHGV-0034346_20	693746.OBV_01730	62.0	0.000000000257	N/A	N/A
structural_annotation	UHGV-0034346_20	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034346_21	UniRef90_A0A4D7ASB8	308.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034346_21	693746.OBV_01680	315.0	0	N/A	N/A
structural_annotation	UHGV-0034346_21	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034346_22	UniRef90_UPI001C01A488	140.0	4.97e-40	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0034346_22	561177.ANHYDRO_01396	84.3	6.26e-19	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0034346_22	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0034346_22	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0034346_23	K03111	132.4	5.1e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0034346_23	phrog_44	141.1	6.30024e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034346_23	UniRef90_A0A3D2HZK1	175.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0034346_23	1297617.JPJD01000076_gene1093	161.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0034346_23	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0034346_23	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0034346_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0034346_23	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0034346_23	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034346_28	UniRef90_UPI0019D331CA	65.9	0.0000000000119	N/A	N/A
eggNOG-mapper	UHGV-0034346_28	411461.DORFOR_01155	52.8	0.000000188	N/A	N/A
Pfam	UHGV-0034346_28	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0034346_28	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_30	phrog_22543	41.8	0.000000000015	N/A	unknown function
PHROG	UHGV-0034346_31	phrog_3136	128.6	2.2e-38	N/A	unknown function
UniRef90	UHGV-0034346_31	UniRef90_UPI001C02A61B	163.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_31	97139.C824_00742	78.2	5.55e-16	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0034346_31	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0034346_31	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_32	phrog_599	56.5	6.4e-16	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0034346_32	UniRef90_A0A1C6DXH4	67.0	0.000000000000784	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-0034346_32	1235790.C805_00069	60.5	0.0000000000429	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0034346_32	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0034346_32	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0034346_32	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0034346_32	PF13211	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_36	phrog_5070	159.1	0	N/A	unknown function
UniRef90	UHGV-0034346_36	UniRef90_UPI000F46DBE3	83.6	1.59e-16	polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-0034346_36	768710.DesyoDRAFT_1067	98.2	8.21e-23	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-0034346_36	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-0034346_36	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-0034346_36	NF040481	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_37	phrog_9804	149.7	1.4013e-44	N/A	unknown function
UniRef90	UHGV-0034346_37	UniRef90_R6LQQ5	170.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_37	1121344.JHZO01000003_gene981	168.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0034346_37	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0034346_37	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_38	phrog_15768	52.2	2e-20	N/A	unknown function
UniRef90	UHGV-0034346_38	UniRef90_R6RVQ1	101.0	1.83e-22	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0034346_38	1121344.JHZO01000003_gene982	111.0	4.01e-27	N/A	N/A
AcrCatalog	UHGV-0034346_38	cluster_14472	77.8	6.95e-19	NA	N/A
Pfam	UHGV-0034346_38	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0034346_38	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0034346_39	K06167	49.2	0.000000000000072	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0034346_39	phrog_392	102.7	4.7e-30	metal-dependent hydrolase	other
UniRef90	UHGV-0034346_39	UniRef90_A0A350XZ09	162.0	0	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_39	665956.HMPREF1032_03101	154.0	6.72623e-44	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0034346_39	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0034346_39	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0034346_39	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_40	phrog_3657	341.0	0	N/A	unknown function
UniRef90	UHGV-0034346_40	UniRef90_UPI001DC4E782	273.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_40	411461.DORFOR_00020	287.0	0	N/A	N/A
PHROG	UHGV-0034346_41	phrog_674	104.8	5.6e-31	N/A	unknown function
UniRef90	UHGV-0034346_41	UniRef90_A0A7X9JQ21	114.0	1.32e-26	N/A	N/A
eggNOG-mapper	UHGV-0034346_41	1408437.JNJN01000039_gene373	110.0	1.7e-25	N/A	N/A
Pfam	UHGV-0034346_41	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0034346_41	PF07083	N/A	N/A	N/A	N/A
Pfam	UHGV-0034346_43	PF06827	N/A	N/A	Zinc finger found in FPG and IleRS	zf-FPG_IleRS
KOfam	UHGV-0034346_44	K07699	56.4	3.8e-16	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
UniRef90	UHGV-0034346_44	UniRef90_A0A354MSK6	66.6	0.0000000000249	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0034346_44	2325.TKV_c12200	59.3	0.00000000904	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-0034346_44	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0034346_44	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-0034346_44	PF08769,TIGR02875	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034346_46	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_51	phrog_1305	137.3	7.00005e-41	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034346_51	UniRef90_A0A3E3DUL7	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034346_51	189426.PODO_11985	136.0	4.26e-37	N/A	N/A
structural_annotation	UHGV-0034346_51	COG2250	N/A	N/A	N/A	N/A
PHROG	UHGV-0034346_52	phrog_14088	42.0	0.0000000000082	N/A	unknown function
UniRef90	UHGV-0034346_52	UniRef90_UPI001655B004	64.3	0.00000000000312	carboxypeptidase	N/A
eggNOG-mapper	UHGV-0034346_52	642492.Clole_1841	52.4	0.0000000267	N/A	N/A
KOfam	UHGV-0034346_54	K18830	56.5	6.3e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0034346_54	phrog_8	48.4	0.00000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0034346_54	UniRef90_UPI001E2BDFBE	114.0	2.62e-30	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0034346_54	903814.ELI_1263	105.0	7.56e-28	Helix-turn-helix domain	N/A
Pfam	UHGV-0034346_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0034346_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0034346_54	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0034346_55	K18830	60.7	3.2e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0034346_55	phrog_8	48.6	0.00000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0034346_55	UniRef90_E2ZIF0	111.0	4.8e-29	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0034346_55	748224.HMPREF9436_01444	111.0	8.05e-30	N/A	N/A
Pfam	UHGV-0034346_55	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0034346_55	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0034346_57	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0034346_58	K14059	113.7	1.1e-33	int; integrase	N/A
PHROG	UHGV-0034346_58	phrog_1	148.0	7.14662e-44	integrase	integration and excision
UniRef90	UHGV-0034346_58	UniRef90_A0A3D3Y0G6	275.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0034346_58	693746.OBV_41260	230.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0034346_58	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0034346_58	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0034346_58	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034346_59	UniRef90_A0A843GWV6	97.1	3.93e-24	Rubrerythrin domain-containing protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0034346	Yes	41,200	55	99	1