vOTU vOTU-061598

vOTU: vOTU-061598

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061598
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00026 → vSUBFAM-02000 → vGENUS-04809 → vSUBGEN-14599 → vOTU-061598
Host lineage
Host range breadth
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0077254
Biosample ID	N/A
Genome length (bp)	31,715 bps
CheckV completeness	91.93% (High-quality)
CDS count	47
CDS density	93.55%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.93)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0077254_2	411463.EUBVEN_02225	190.0	0	COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis	N/A
COG	UHGV-0077254_2	COG0630	N/A	N/A	Type IV secretory pathway ATPase VirB11/Archaellum biosynthesis ATPase ArlI/FlaI	N/A
KOfam	UHGV-0077254_3	K06400	422.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0077254_3	phrog_95	434.1	0	integrase	integration and excision
UniRef90	UHGV-0077254_3	UniRef90_A0A143XYP5	480.0	0	DNA-invertase hin	N/A
eggNOG-mapper	UHGV-0077254_3	883156.HMPREF9282_01201	379.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0077254_3	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0077254_3	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0077254_3	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0077254_3	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0077254_3	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0077254_5	UniRef90_A0A1C5RDF3	79.0	2.66e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0077254_5	1567014.A0A0A7RTU8_9VIRU	73.6	0.000000000000117	protein disulfide oxidoreductase activity	N/A
structural_annotation	UHGV-0077254_5	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0077254_6	UniRef90_A0A174WQM8	70.5	0.0000000000000135	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0077254_6	1430331.EP10_02425	50.8	0.000000136	N/A	N/A
structural_annotation	UHGV-0077254_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_8	phrog_155	68.4	1.2e-19	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_8	UniRef90_A0A285CXH5	84.7	1.42e-16	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0077254_8	1120971.AUCA01000037_gene2868	69.3	0.0000000000133	ERF superfamily	N/A
Pfam	UHGV-0077254_8	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0077254_8	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_11	phrog_6244	84.6	1.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0077254_11	1399942.U3PIX9_9CAUD	74.7	5.52e-16	N/A	N/A
structural_annotation	UHGV-0077254_11	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_12	phrog_298	70.4	1.5e-20	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_12	UniRef90_A0A843HPP6	154.0	4.62428e-44	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0077254_12	1399942.U3PDT7_9CAUD	248.0	0	nuclease activity	N/A
structural_annotation	UHGV-0077254_12	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
KOfam	UHGV-0077254_13	K03111	125.0	1e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0077254_13	phrog_44	128.0	8.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_13	UniRef90_A5Z4B4	197.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0077254_13	411463.EUBVEN_00539	197.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0077254_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0077254_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0077254_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0077254_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0077254_13	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_14	phrog_72	61.9	1.2e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0077254_14	1399942.U3PCT8_9CAUD	92.0	2.55e-21	N/A	N/A
structural_annotation	UHGV-0077254_14	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0077254_15	K01160	47.6	0.00000000000049	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0077254_15	phrog_1682	70.4	3e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_15	UniRef90_R7FGZ0	155.0	0	Gp63	N/A
eggNOG-mapper	UHGV-0077254_15	428125.CLOLEP_01819	92.4	2.21e-22	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0077254_15	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0077254_15	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_16	phrog_4973	44.7	0.0000000000022	N/A	unknown function
UniRef90	UHGV-0077254_16	UniRef90_UPI00164C43FE	72.0	0.00000000000000378	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0077254_16	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0077254_16	PF14090,TIGR00373,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_17	phrog_5968	157.2	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_17	UniRef90_A0A6A8SP07	227.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0077254_17	702450.CUW_0518	190.0	0	Phage replisome organizer N-terminal	N/A
Pfam	UHGV-0077254_17	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0077254_17	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0077254_17	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0077254_17	PF09681,TIGR01714,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-0077254_19	K02315	184.3	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0077254_19	phrog_50	178.2	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_19	UniRef90_A3DI90	240.0	0	AAA ATPase	N/A
eggNOG-mapper	UHGV-0077254_19	203119.Cthe_2467	240.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0077254_19	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
NCBIFam	UHGV-0077254_19	NF005992.0	N/A	N/A	hypothetical protein	N/A
COG	UHGV-0077254_19	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0077254_19	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0077254_20	537007.BLAHAN_05460	52.0	0.00000023	N/A	N/A
PHROG	UHGV-0077254_21	phrog_2118	115.4	5.6e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_21	UniRef90_A0A3E5ALS7	186.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0077254_21	610130.Closa_0730	133.0	1.34e-38	HNH endonuclease	N/A
Pfam	UHGV-0077254_21	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0077254_21	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0077254_21	TIGR02646,COG1403	N/A	N/A	N/A	N/A
KOfam	UHGV-0077254_24	K07273	164.1	0	acm; lysozyme	N/A
PHROG	UHGV-0077254_24	phrog_291	164.9	0	endolysin	lysis
UniRef90	UHGV-0077254_24	UniRef90_UPI0008713C11	266.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0077254_24	1120978.KB894083_gene891	182.0	0	Pfam:Cpl-7	N/A
Pfam	UHGV-0077254_24	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0077254_24	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0077254_24	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0077254_24	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
KOfam	UHGV-0077254_25	K07451	47.1	0.00000000000045	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0077254_25	phrog_144	61.1	2.5e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0077254_25	UniRef90_I2E873	147.0	1.7236e-43	HNHc domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0077254_25	508419.F8J1A6_9CAUD	131.0	7.96e-38	HNH endonuclease	N/A
Pfam	UHGV-0077254_25	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0077254_26	phrog_13845	131.8	2.1e-39	N/A	unknown function
eggNOG-mapper	UHGV-0077254_26	1399942.U3PDR2_9CAUD	119.0	2.05e-33	N/A	N/A
structural_annotation	UHGV-0077254_26	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_27	phrog_9	288.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0077254_27	UniRef90_A0A075KKZ0	862.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0077254_27	508419.F8J159_9CAUD	869.0	0	Phage Terminase	N/A
Pfam	UHGV-0077254_27	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0077254_27	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0077254_27	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_28	phrog_12	205.3	0	portal protein	head and packaging
UniRef90	UHGV-0077254_28	UniRef90_A0A843HZ12	558.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0077254_28	1399942.U3PFW0_9CAUD	521.0	0	Phage portal protein	N/A
Pfam	UHGV-0077254_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0077254_28	TIGR01537.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0077254_28	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0077254_29	K06904	105.5	7.5e-31	N/A	N/A
PHROG	UHGV-0077254_29	phrog_80	122.1	7.5e-36	head maturation protease	head and packaging
UniRef90	UHGV-0077254_29	UniRef90_U3PIW1	228.0	0	Putative ClpP protease	N/A
eggNOG-mapper	UHGV-0077254_29	1399942.U3PIW1_9CAUD	228.0	0	peptidase activity	N/A
Pfam	UHGV-0077254_29	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0077254_29	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-0077254_29	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_30	phrog_10	215.6	0	major head protein	head and packaging
UniRef90	UHGV-0077254_30	UniRef90_A0A075KK19	439.0	0	Putative major head protein	N/A
eggNOG-mapper	UHGV-0077254_30	1399942.U3PDR8_9CAUD	445.0	0	peptidase activity	N/A
Pfam	UHGV-0077254_30	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0077254_30	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0077254_30	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_31	phrog_6865	56.5	2.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0077254_31	1399942.U3PBG9_9CAUD	52.4	0.0000000125	N/A	N/A
structural_annotation	UHGV-0077254_31	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_32	phrog_40	40.2	0.000000000057	head-tail adaptor Ad1	connector
UniRef90	UHGV-0077254_32	UniRef90_UPI001BA8BAD6	103.0	1.17e-26	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0077254_32	1399942.U3PCS3_9CAUD	114.0	7.58e-32	N/A	N/A
NCBIFam	UHGV-0077254_32	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0077254_32	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_33	phrog_25	54.6	0.0000000000000022	head closure Hc1	connector
UniRef90	UHGV-0077254_33	UniRef90_A0A843I196	142.0	7.0107e-42	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0077254_33	508419.F8J165_9CAUD	112.0	1.04e-30	Phage head-tail joining protein	N/A
Pfam	UHGV-0077254_33	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0077254_33	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0077254_33	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0077254_34	UniRef90_A0A843HUI9	134.0	8.7e-38	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0077254_34	508419.F8J166_9CAUD	142.0	1.46996e-41	N/A	N/A
structural_annotation	UHGV-0077254_34	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_35	phrog_78	55.8	0.000000000000001	tail terminator	connector
UniRef90	UHGV-0077254_35	UniRef90_UPI0003697F12	73.9	0.00000000000000853	N/A	N/A
eggNOG-mapper	UHGV-0077254_35	935948.KE386495_gene1329	73.2	0.00000000000000309	N/A	N/A
structural_annotation	UHGV-0077254_35	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_36	phrog_88	123.7	1.3e-36	major tail protein	tail
UniRef90	UHGV-0077254_36	UniRef90_A0A075KJR8	241.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0077254_36	1399942.U3PBH4_9CAUD	244.0	0	N/A	N/A
NCBIFam	UHGV-0077254_36	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0077254_36	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_37	phrog_2115	53.8	0.0000000000000048	tail protein	tail
eggNOG-mapper	UHGV-0077254_37	1399942.U3PCS7_9CAUD	127.0	1.74e-36	N/A	N/A
structural_annotation	UHGV-0077254_37	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_38	phrog_6900	258.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0077254_38	1499683.CCFF01000017_gene2565	281.0	0	tape measure	N/A
COG	UHGV-0077254_38	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_39	phrog_33	63.8	4.8e-18	distal tail protein Dit	tail
UniRef90	UHGV-0077254_39	UniRef90_A0A075KJA3	243.0	0	Putative tail component	N/A
eggNOG-mapper	UHGV-0077254_39	1399942.U3PIW9_9CAUD	244.0	0	Phage tail protein	N/A
NCBIFam	UHGV-0077254_39	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-0077254_39	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_40	phrog_1084	47.6	0.0000000000003	N/A	unknown function
eggNOG-mapper	UHGV-0077254_40	1399942.U3PDS7_9CAUD	79.3	1.14e-17	N/A	N/A
structural_annotation	UHGV-0077254_40	PF08481,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_42	phrog_1067	368.7	0	minor head protein	head and packaging
UniRef90	UHGV-0077254_42	UniRef90_A0A2P1CCB3	546.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0077254_42	1399942.U3PFX4_9CAUD	523.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0077254_42	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0077254_42	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0077254_42	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0077254_43	phrog_372	249.0	0	tail protein	tail
UniRef90	UHGV-0077254_43	UniRef90_A0A1Y4NAZ0	129.0	1.15e-27	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0077254_43	469596.HMPREF9488_01319	138.0	1.41e-31	N/A	N/A
Pfam	UHGV-0077254_43	PF05895	N/A	N/A	N/A	DUF859
PHROG	UHGV-0077254_44	phrog_4105	91.6	7.1e-27	N/A	unknown function
UniRef90	UHGV-0077254_44	UniRef90_A0A8D9UHA9	94.7	2.78e-23	Holin protein	N/A
eggNOG-mapper	UHGV-0077254_44	742733.HMPREF9469_05011	95.9	1.88e-24	N/A	N/A
Pfam	UHGV-0077254_47	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-0077254_47	PF03869,NF010256	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0077254	Yes	31,715	39	92	1