vOTU vOTU-061710

vOTU: vOTU-061710

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061710
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-05356 → vGENUS-11431 → vSUBGEN-16223 → vOTU-061710
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-884 → CAG-884 sp000433875
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0002546
Biosample ID	SAMEA4766177
Genome length (bp)	38,136 bps
CheckV completeness	95.30% (High-quality)
CDS count	65
CDS density	94.30%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-884 → CAG-884 sp000433875	Total connections	4	Host agreement	75
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → RUG11198	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0002546_1	phrog_7566	73.8	2.1e-21	N/A	unknown function
UniRef90	UHGV-0002546_1	UniRef90_UPI000E542A38	56.6	0.000000167	phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0002546_1	1118057.CAGX01000020_gene1648	51.2	0.00000249	N/A	N/A
PHROG	UHGV-0002546_5	phrog_87	90.0	1.7e-26	metallo-protease	other
UniRef90	UHGV-0002546_5	UniRef90_A0A3E0J1Y1	91.7	6.23e-20	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0002546_5	1414720.CBYM010000001_gene716	85.5	1.54e-18	N/A	N/A
Pfam	UHGV-0002546_5	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0002546_5	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0002546_5	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0002546_6	K07273	171.8	0	acm; lysozyme	N/A
PHROG	UHGV-0002546_6	phrog_291	141.1	9.39991e-42	endolysin	lysis
UniRef90	UHGV-0002546_6	UniRef90_A0A1I0B8R0	201.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-0002546_6	398512.JQKC01000068_gene4270	209.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0002546_6	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0002546_6	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0002546_6	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0002546_6	COG0810	N/A	N/A	Periplasmic protein TonB, links inner and outer membranes	N/A
structural_annotation	UHGV-0002546_6	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
Pfam	UHGV-0002546_7	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
PHROG	UHGV-0002546_11	phrog_23208	42.8	0.0000000000033	virion structural protein	head and packaging
PHROG	UHGV-0002546_14	phrog_13879	150.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0002546_14	1122919.KB905559_gene1344	97.8	1.4e-18	N/A	N/A
structural_annotation	UHGV-0002546_14	PF14594,PF00754,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
Pfam	UHGV-0002546_15	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0002546_15	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_16	phrog_1686	71.7	7.6e-22	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0002546_16	1298920.KI911353_gene2068	63.9	0.000000185	domain protein	N/A
COG	UHGV-0002546_16	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002546_18	PF12363	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002546_19	445972.ANACOL_01851	90.5	5.87e-21	N/A	N/A
structural_annotation	UHGV-0002546_19	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0002546_20	445972.ANACOL_01850	56.6	0.0000000226	N/A	N/A
structural_annotation	UHGV-0002546_20	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_21	phrog_5	53.8	0.0000000000000043	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0002546_21	445972.ANACOL_01849	58.9	0.0000000255	N/A	N/A
NCBIFam	UHGV-0002546_21	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0002546_21	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002546_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002546_23	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_26	phrog_247	177.5	0	major head protein	head and packaging
UniRef90	UHGV-0002546_26	UniRef90_M1ZSE2	251.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0002546_26	445335.CBN_1379	251.0	0	N/A	N/A
COG	UHGV-0002546_26	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0002546_26	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_27	phrog_172	53.8	0.0000000000000042	head scaffolding protein	head and packaging
Pfam	UHGV-0002546_27	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0002546_27	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_28	phrog_355	56.2	5.6e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002546_28	UniRef90_UPI0013ED9517	88.2	3.43e-20	N/A	N/A
eggNOG-mapper	UHGV-0002546_28	1321782.HMPREF1986_00358	66.2	0.00000000000086	N/A	N/A
Pfam	UHGV-0002546_28	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0002546_28	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002546_30	PF03496,PF04233,MF_04142,NF041404,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_31	phrog_64	189.9	0	portal protein	head and packaging
UniRef90	UHGV-0002546_31	UniRef90_R7IUE9	580.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0002546_31	665956.HMPREF1032_03614	238.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0002546_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0002546_31	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_32	phrog_30251	524.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0002546_32	UniRef90_A0A3A6JKF1	546.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0002546_32	1408437.JNJN01000045_gene596	514.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0002546_32	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0002546_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002546_32	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_33	phrog_2412	67.9	1.2e-19	N/A	unknown function
UniRef90	UHGV-0002546_33	UniRef90_R5AAQ5	66.6	0.0000000000226	N/A	N/A
eggNOG-mapper	UHGV-0002546_33	742738.HMPREF9460_02504	56.6	0.0000000254	N/A	N/A
PHROG	UHGV-0002546_34	phrog_13321	56.5	3.1e-16	N/A	unknown function
UniRef90	UHGV-0002546_34	UniRef90_A0A2P8EL88	422.0	0	DNA repair photolyase	N/A
eggNOG-mapper	UHGV-0002546_34	748224.HMPREF9436_03343	392.0	0	DNA photolyase activity	N/A
COG	UHGV-0002546_34	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0002546_34	PF20903,MF_00660,NF033668,COG1180	N/A	N/A	N/A	N/A
KOfam	UHGV-0002546_35	K03497	53.0	0.0000000000000069	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0002546_35	phrog_620	161.4	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002546_35	UniRef90_C7RH97	168.0	0	ParB domain protein nuclease	N/A
eggNOG-mapper	UHGV-0002546_35	525919.Apre_0830	168.0	0	ParB-like nuclease domain	N/A
PADLOC	UHGV-0002546_35	MTase_II_00015	93.3	4.5e-27	Type II methyltransferase	RM
Pfam	UHGV-0002546_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0002546_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0002546_35	PF02195,TIGR00180,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_36	phrog_1233	90.7	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0002546_36	1151292.QEW_4538	120.0	3.59e-34	N/A	N/A
PHROG	UHGV-0002546_37	phrog_36	58.1	2.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0002546_37	UniRef90_R5MSQ9	136.0	1.3e-38	DNA-directed RNA polymerase specialized sigma subunit sigma24	N/A
eggNOG-mapper	UHGV-0002546_37	1321779.HMPREF1984_01313	68.9	0.00000000000328	N/A	N/A
Pfam	UHGV-0002546_37	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0002546_37	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0002546_37	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_39	phrog_8470	112.9	5.3e-34	N/A	unknown function
UniRef90	UHGV-0002546_39	UniRef90_UPI00156DB36C	105.0	6.29e-21	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0002546_39	1582152.A0A0A8WIR3_9CAUD	80.9	0.00000000000011	PcfJ-like protein	N/A
Pfam	UHGV-0002546_39	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0002546_39	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_40	phrog_7445	64.8	1.4e-18	N/A	unknown function
UniRef90	UHGV-0002546_40	UniRef90_A0A4R3TDL2	55.5	0.000000422	PcfK-like protein	N/A
eggNOG-mapper	UHGV-0002546_40	1232449.BAHV02000018_gene1541	63.5	0.000000000067	PcfK-like protein	N/A
Pfam	UHGV-0002546_40	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0002546_40	PF14058	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002546_41	UniRef90_A0A8D9UHX4	78.6	0.000000000000271	RNA repair pathway DNA polymerase beta family	N/A
eggNOG-mapper	UHGV-0002546_41	498761.HM1_0723	55.1	0.00000553	Predicted nucleotidyltransferase	N/A
structural_annotation	UHGV-0002546_41	PF10127,NF000079,COG3541	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0002546_46	PF09871,TIGR00739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002546_50	UniRef90_A0A6N8UF38	61.6	0.0000000000613	Sporulation protein Cse60	N/A
eggNOG-mapper	UHGV-0002546_50	552396.HMPREF0863_00849	59.3	0.0000000000763	Sporulation protein Cse60	N/A
Pfam	UHGV-0002546_50	PF10957	N/A	N/A	Sporulation protein Cse60	Spore_Cse60
eggNOG-mapper	UHGV-0002546_58	457412.RSAG_00329	61.6	0.0000000000761	N/A	N/A
KOfam	UHGV-0002546_59	K02314	193.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0002546_59	phrog_19	195.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002546_59	UniRef90_R5LJR5	310.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0002546_59	1232449.BAHV02000016_gene1835	238.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0002546_59	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0002546_59	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0002546_59	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0002546_59	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_60	phrog_19658	90.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0002546_60	UniRef90_UPI001EED0456	160.0	4.2039e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0002546_60	931276.Cspa_c10030	160.0	1.4013e-45	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0002546_60	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0002546_60	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0002546_60	PF13730,MF_01909,NF041413,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_63	phrog_8	43.3	0.0000000000085	transcriptional regulator	transcription regulation
UniRef90	UHGV-0002546_63	UniRef90_R5A161	79.3	5.28e-18	Helix-turn-helix domain protein	N/A
Pfam	UHGV-0002546_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0002546_63	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0002546_63	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0002546_64	UniRef90_R5A425	112.0	5.85e-30	DNA-binding helix-turn-helix protein	N/A
COG	UHGV-0002546_64	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0002546_64	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0002546_65	phrog_87	46.6	0.00000000000044	metallo-protease	other
Pfam	UHGV-0002546_65	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0002546_65	PF06114,COG2856	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0002546	Yes	38,136	27	95	1