vOTU vOTU-061778

vOTU: vOTU-061778

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061778
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01099 → vGENUS-01599 → vSUBGEN-33224 → vOTU-061778
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1386357
Biosample ID	SAMN02334108
Genome length (bp)	31,648 bps
CheckV completeness	91.77% (High-quality)
CDS count	50
CDS density	92.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1386357_2	phrog_372	233.1	0	tail protein	tail
UniRef90	UHGV-1386357_2	UniRef90_UPI001BDA35F1	124.0	3.15e-26	N/A	N/A
eggNOG-mapper	UHGV-1386357_2	764299.STRIC_1425	102.0	1.2e-20	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-1386357_2	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1386357_2	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1386357_2	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_3	phrog_19556	112.8	2.9e-33	tail fiber protein; host specificity	tail
UniRef90	UHGV-1386357_3	UniRef90_A0A374AEU0	109.0	8.37e-22	Collagen-like protein	N/A
eggNOG-mapper	UHGV-1386357_3	428127.EUBDOL_01565	175.0	4.76441e-44	cellulase activity	N/A
COG	UHGV-1386357_3	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1386357_3	PF03921,PF03426,NF041425,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_4	phrog_30133	115.4	4.5e-34	virion structural protein	head and packaging
UniRef90	UHGV-1386357_4	UniRef90_A0A087BZT1	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-1386357_4	1504823.CCMM01000008_gene1029	297.0	0	N/A	N/A
structural_annotation	UHGV-1386357_4	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_5	phrog_1067	313.3	0	minor head protein	head and packaging
UniRef90	UHGV-1386357_5	UniRef90_A0A890GYC9	408.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1386357_5	1123263.AUKY01000068_gene489	392.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1386357_5	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1386357_5	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1386357_5	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1386357_5	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_6	phrog_33	60.9	3.3e-17	distal tail protein Dit	tail
UniRef90	UHGV-1386357_6	UniRef90_A0A2X2UUQ3	139.0	4.67e-37	Phage putative tail component	N/A
eggNOG-mapper	UHGV-1386357_6	1123263.AUKY01000068_gene490	216.0	0	tail component	N/A
COG	UHGV-1386357_6	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1386357_6	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_7	phrog_6900	244.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1386357_7	UniRef90_A0A1C6EH41	323.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1386357_7	12390.Q77MU4_9CAUD	282.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1386357_7	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_8	phrog_1633	111.4	5.3e-33	N/A	unknown function
UniRef90	UHGV-1386357_8	UniRef90_UPI001939D555	107.0	1.54e-27	N/A	N/A
eggNOG-mapper	UHGV-1386357_8	1321820.HMPREF1983_00925	101.0	4.57e-26	N/A	N/A
structural_annotation	UHGV-1386357_8	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_10	phrog_117	137.4	6.89999e-41	major tail protein	tail
UniRef90	UHGV-1386357_10	UniRef90_A0A356C4M0	206.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1386357_10	1121864.OMO_02158	202.0	0	domain, Protein	N/A
COG	UHGV-1386357_10	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1386357_10	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_11	phrog_123	72.6	5.3e-21	tail terminator	connector
UniRef90	UHGV-1386357_11	UniRef90_A0A2A5RIK6	117.0	9.78e-32	N/A	N/A
eggNOG-mapper	UHGV-1386357_11	875454.BAEW01000017_gene1591	129.0	2.16e-37	N/A	N/A
structural_annotation	UHGV-1386357_11	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_12	phrog_387	76.1	3.2e-22	neck protein	connector
eggNOG-mapper	UHGV-1386357_12	908337.HMPREF9257_0534	55.8	0.00000000357	N/A	N/A
PHROG	UHGV-1386357_13	phrog_501	91.4	7.3e-27	head closure Hc1	connector
UniRef90	UHGV-1386357_13	UniRef90_A0A139QHM6	142.0	9.08041e-42	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1386357_13	157924.Q7Y4I1_9CAUD	133.0	6.65e-39	N/A	N/A
structural_annotation	UHGV-1386357_13	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_14	phrog_137	77.7	1e-22	head-tail adaptor Ad1	connector
UniRef90	UHGV-1386357_14	UniRef90_UPI000C83D02F	132.0	4.74e-37	phage Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1386357_14	706433.HMPREF9430_01264	129.0	7.22e-37	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1386357_14	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1386357_14	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_16	phrog_32396	132.2	1.3e-39	N/A	unknown function
UniRef90	UHGV-1386357_16	UniRef90_A0A7X2NQN8	426.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1386357_16	706433.HMPREF9430_01265	438.0	0	Phage capsid family	N/A
Pfam	UHGV-1386357_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1386357_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1386357_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_17	phrog_233	91.8	2.2e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1386357_17	UniRef90_A0A890GYE3	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-1386357_17	706433.HMPREF9430_01266	175.0	0	N/A	N/A
Pfam	UHGV-1386357_17	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1386357_17	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_18	phrog_17688	353.4	0	N/A	unknown function
UniRef90	UHGV-1386357_18	UniRef90_E7MNZ6	671.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1386357_18	706433.HMPREF9430_01267	671.0	0	phage terminase, large subunit	N/A
COG	UHGV-1386357_18	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1386357_18	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_19	phrog_3675	76.5	2.1e-22	N/A	unknown function
UniRef90	UHGV-1386357_19	UniRef90_UPI001C385ABB	118.0	2.37e-32	YjcQ family protein	N/A
eggNOG-mapper	UHGV-1386357_19	1111134.HMPREF1253_1941	69.3	0.0000000000000919	YjcQ protein	N/A
Pfam	UHGV-1386357_19	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1386357_19	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_20	phrog_3675	104.8	3.6e-31	N/A	unknown function
UniRef90	UHGV-1386357_20	UniRef90_U2JT34	111.0	1.95e-29	YjcQ protein	N/A
eggNOG-mapper	UHGV-1386357_20	665950.HMPREF1025_02533	127.0	1.75e-36	YjcQ protein	N/A
Pfam	UHGV-1386357_20	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1386357_20	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1386357_21	1121335.Clst_0388	51.2	0.000000114	N/A	N/A
PHROG	UHGV-1386357_22	phrog_7104	41.5	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-1386357_22	1321784.HMPREF1987_01068	66.2	0.0000000037	cell adhesion	N/A
COG	UHGV-1386357_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1386357_22	PF14076	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_23	phrog_104	254.8	0	portal protein	head and packaging
UniRef90	UHGV-1386357_23	UniRef90_A0A890GW77	528.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1386357_23	706433.HMPREF9430_01270	505.0	0	Phage portal protein, SPP1 Gp6-like	N/A
structural_annotation	UHGV-1386357_23	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_24	phrog_338	101.8	7.7e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1386357_24	UniRef90_UPI000C8316D0	173.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1386357_24	706433.HMPREF9430_01271	173.0	0	HNH endonuclease domain protein	N/A
Pfam	UHGV-1386357_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1386357_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1386357_24	PF01844	N/A	N/A	N/A	N/A
KOfam	UHGV-1386357_25	K18843	61.8	1.5e-17	hicB; antitoxin HicB	N/A
PHROG	UHGV-1386357_25	phrog_497	72.2	9.4e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1386357_25	UniRef90_A0A890GWM3	125.0	2.21e-34	Type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-1386357_25	428127.EUBDOL_01260	120.0	1.84e-33	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-1386357_25	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-1386357_25	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-1386357_25	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-1386357_26	K07339	68.5	8e-20	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-1386357_26	phrog_353	77.6	9e-23	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1386357_26	UniRef90_A0A1C6J681	78.2	7.73e-18	YcfA-like protein	N/A
eggNOG-mapper	UHGV-1386357_26	478749.BRYFOR_07601	74.3	4.35e-17	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-1386357_26	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-1386357_26	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-1386357_26	PF07927,COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_27	phrog_36	64.6	1.9e-18	transcriptional regulator	transcription regulation
COG	UHGV-1386357_27	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1386357_27	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_32	phrog_803	54.1	0.0000000000000029	host nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1386357_32	UniRef90_UPI001039D6AD	56.6	0.00000000236	integrase	N/A
eggNOG-mapper	UHGV-1386357_32	1002809.SSIL_1411	62.4	0.00000000000249	N/A	N/A
KOfam	UHGV-1386357_34	K07505	227.7	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1386357_34	phrog_2597	733.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1386357_34	UniRef90_UPI000404F782	558.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1386357_34	1123263.AUKY01000015_gene1593	558.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1386357_34	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1386357_34	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1386357_34	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1386357_34	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1386357_35	K01160	46.5	0.00000000000091	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1386357_35	phrog_140	140.8	5.4006e-42	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1386357_35	UniRef90_UPI000CF97872	157.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1386357_35	545697.HMPREF0216_02819	124.0	1.35e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1386357_35	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1386357_35	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1386357_35	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_36	phrog_2698	122.3	2.3e-36	N/A	unknown function
UniRef90	UHGV-1386357_36	UniRef90_UPI00148D30D4	87.0	1.81e-18	N/A	N/A
eggNOG-mapper	UHGV-1386357_36	1232449.BAHV02000010_gene2698	83.6	1.54e-18	N/A	N/A
PHROG	UHGV-1386357_37	phrog_2872	254.6	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1386357_37	UniRef90_UPI0007C86507	235.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1386357_37	754027.HMPREF9554_00709	219.0	0	N/A	N/A
Pfam	UHGV-1386357_37	PF13479	N/A	N/A	AAA domain	AAA_24
PHROG	UHGV-1386357_38	phrog_253	116.3	2.3e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1386357_38	UniRef90_A0A851IAI3	70.1	0.00000000000386	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-1386357_38	543734.LCABL_10930	66.6	0.0000000000138	Siphovirus Gp157	N/A
Pfam	UHGV-1386357_38	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-1386357_38	PF05565,NF002139	N/A	N/A	N/A	N/A
Pfam	UHGV-1386357_42	PF07716	N/A	N/A	Basic region leucine zipper	bZIP_2
eggNOG-mapper	UHGV-1386357_45	1235792.C808_05393	48.1	0.00000814	N/A	N/A
KOfam	UHGV-1386357_47	K07741	136.0	5.70001e-40	antB; anti-repressor protein	N/A
PHROG	UHGV-1386357_47	phrog_130	277.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1386357_47	UniRef90_A0A1E9PGC1	331.0	0	Antirepressor	N/A
eggNOG-mapper	UHGV-1386357_47	578234.B8R674_9CAUD	315.0	0	DNA binding	N/A
Pfam	UHGV-1386357_47	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1386357_47	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-1386357_47	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1386357_48	UniRef90_A0A841ZV66	63.2	0.0000000000115	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1386357_48	1321782.HMPREF1986_00318	63.9	0.000000000000868	N/A	N/A
structural_annotation	UHGV-1386357_48	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1386357_49	K22299	58.5	1.6e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1386357_49	phrog_8	68.9	1.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1386357_49	UniRef90_A0A417K795	89.7	9.11e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1386357_49	1504823.CCMM01000010_gene1370	89.4	1.28e-20	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1386357_49	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1386357_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1386357_49	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1386357_50	phrog_2158	196.8	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1386357_50	UniRef90_UPI0013ECC528	385.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-1386357_50	476272.RUMHYD_02820	304.0	0	Abi-like protein	N/A
PADLOC	UHGV-1386357_50	AbiD	134.3	1.8e-39	AbiD	Abi
Pfam	UHGV-1386357_50	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-1386357_50	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-1386357_50	PF07751,COG4823	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1386357	Yes	31,648	39	92	1