vOTU vOTU-061937

vOTU: vOTU-061937

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-061937
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vSUBGEN-37637 → vOTU-061937
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020593
Biosample ID	SAMEA4765921
Genome length (bp)	40,792 bps
CheckV completeness	97.29% (High-quality)
CDS count	55
CDS density	91.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	182	Host agreement	93.96
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp003516765	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0020593_1	1408437.JNJN01000039_gene389	485.0	0	heme binding	N/A
Pfam	UHGV-0020593_1	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-0020593_1	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
PHROG	UHGV-0020593_2	phrog_33872	40.6	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0020593_2	693746.OBV_19740	61.2	0.0000000000931	N/A	N/A
structural_annotation	UHGV-0020593_3	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-0020593_4	K16628	167.2	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0020593_4	phrog_819	127.8	0	tail protein	tail
eggNOG-mapper	UHGV-0020593_4	1232443.BAIA02000078_gene14	84.0	0.0000000000000474	nuclear chromosome segregation	N/A
Pfam	UHGV-0020593_4	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0020593_4	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0020593_5	phrog_37900	66.5	3e-21	N/A	unknown function
UniRef90	UHGV-0020593_5	UniRef90_R5IRZ6	379.0	0	N/A	N/A
eggNOG-mapper	UHGV-0020593_5	1519439.JPJG01000060_gene1894	266.0	0	N/A	N/A
Pfam	UHGV-0020593_5	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0020593_5	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0020593_5	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_6	phrog_35892	49.5	1.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0020593_6	246199.CUS_5875	62.0	0.000000196	Clostripain family	N/A
Pfam	UHGV-0020593_6	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0020593_6	COG0711	N/A	N/A	FoF1-type ATP synthase, membrane subunit b or b'	N/A
structural_annotation	UHGV-0020593_6	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_7	phrog_937	58.3	1.6e-16	hemolysin	other
eggNOG-mapper	UHGV-0020593_7	1519439.JPJG01000023_gene533	79.7	3.47e-18	N/A	N/A
PHROG	UHGV-0020593_9	phrog_6918	94.3	7.9e-28	holin	lysis
UniRef90	UHGV-0020593_9	UniRef90_A0A316QCY7	99.4	5.7e-25	Holin	N/A
eggNOG-mapper	UHGV-0020593_9	1297617.JPJD01000020_gene301	97.8	3.99e-25	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0020593_9	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0020593_9	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_10	phrog_14030	140.0	1.49995e-41	N/A	unknown function
UniRef90	UHGV-0020593_10	UniRef90_R6LL81	239.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0020593_10	1121866.AUGK01000003_gene1444	93.6	3.74e-19	amidase activity	N/A
COG	UHGV-0020593_10	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0020593_12	phrog_16490	60.6	3.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0020593_12	641112.ACOK01000103_gene525	57.0	0.000000234	N/A	N/A
structural_annotation	UHGV-0020593_13	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0020593_14	UniRef90_A0A8F0WD75	82.0	1.99e-16	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0020593_14	1378168.N510_03079	67.4	0.0000000000293	N/A	N/A
KOfam	UHGV-0020593_15	K14059	207.4	0	int; integrase	N/A
PHROG	UHGV-0020593_15	phrog_1	198.3	0	integrase	integration and excision
UniRef90	UHGV-0020593_15	UniRef90_A0A1H8A220	268.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0020593_15	1507.HMPREF0262_00307	203.0	0	Phage integrase family	N/A
Pfam	UHGV-0020593_15	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0020593_15	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0020593_15	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0020593_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020593_16	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0020593_16	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0020593_21	K22300	52.3	0.000000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020593_21	phrog_8	41.6	0.000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020593_21	UniRef90_UPI001EDCF802	109.0	2.68e-28	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0020593_21	748224.HMPREF9436_01444	100.0	2.35e-25	N/A	N/A
Pfam	UHGV-0020593_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020593_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020593_21	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020593_24	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020593_27	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020593_28	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-0020593_31	K00558	46.7	0.00000000000025	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0020593_31	phrog_757	130.1	1.1e-38	DNA methyltransferase	other
UniRef90	UHGV-0020593_31	UniRef90_A0A1C5WFL3	402.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0020593_31	622312.ROSEINA2194_01264	378.0	0	C-5 cytosine-specific DNA methylase	N/A
Pfam	UHGV-0020593_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0020593_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0020593_31	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_32	phrog_924	42.5	0.000000000014	N/A	unknown function
UniRef90	UHGV-0020593_32	UniRef90_UPI001C10265C	73.2	0.0000000000000245	N/A	N/A
Pfam	UHGV-0020593_32	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0020593_32	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_33	phrog_3136	127.0	7.2e-38	N/A	unknown function
UniRef90	UHGV-0020593_33	UniRef90_A0A3D0HBD2	94.4	4.7e-21	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0020593_33	1235793.C809_02645	69.7	0.00000000000875	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0020593_33	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0020593_33	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_34	phrog_38832	43.8	0.0000000000029	N/A	unknown function
PHROG	UHGV-0020593_38	phrog_190	99.7	2.9e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0020593_38	UniRef90_UPI0006C2AC63	133.0	3.49e-37	N/A	N/A
eggNOG-mapper	UHGV-0020593_38	1226322.HMPREF1545_00295	115.0	8.11e-31	N/A	N/A
Pfam	UHGV-0020593_38	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0020593_38	PF06356	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020593_40	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_42	phrog_2245	84.5	1.2e-24	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0020593_42	UniRef90_A0A4U9RLZ8	72.8	0.0000000000000898	N/A	N/A
eggNOG-mapper	UHGV-0020593_42	1567010.A0A0A7RU90_9VIRU	67.4	0.00000000000528	protein disulfide oxidoreductase activity	N/A
structural_annotation	UHGV-0020593_42	PF08271	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_43	phrog_21498	297.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0020593_43	78346.BRUM_0376	263.0	0	DNA binding	N/A
COG	UHGV-0020593_43	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0020593_43	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_44	phrog_3584	113.3	2e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020593_44	411470.RUMGNA_02047	60.8	0.0000000588	N/A	N/A
structural_annotation	UHGV-0020593_44	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_45	phrog_606	65.7	7.4e-19	terminase small subunit	head and packaging
UniRef90	UHGV-0020593_45	UniRef90_UPI001F487344	125.0	5.56e-34	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0020593_45	397290.C810_05185	125.0	2.27e-34	DNA-packaging protein gp3	N/A
Pfam	UHGV-0020593_45	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0020593_45	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0020593_46	K06909	152.3	4.2039e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0020593_46	phrog_979	138.0	3.20057e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0020593_46	UniRef90_A0A810Q5R0	652.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0020593_46	1410650.JHWL01000003_gene2834	618.0	0	N/A	N/A
Pfam	UHGV-0020593_46	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0020593_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0020593_46	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_47	phrog_511	240.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0020593_47	1410650.JHWL01000003_gene2827	322.0	0	N/A	N/A
structural_annotation	UHGV-0020593_47	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020593_49	537007.BLAHAN_05255	60.5	0.000000562	N/A	N/A
PHROG	UHGV-0020593_50	phrog_37329	48.2	0.00000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0020593_50	1395587.P364_0113810	57.8	0.00000343	Fibronectin type 3 domain	N/A
Pfam	UHGV-0020593_50	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0020593_50	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0020593_50	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_52	phrog_156	304.0	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0020593_52	1410650.JHWL01000003_gene2833	541.0	0	N/A	N/A
structural_annotation	UHGV-0020593_52	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0020593_53	phrog_13908	143.3	1.60028e-42	N/A	unknown function
eggNOG-mapper	UHGV-0020593_53	1410650.JHWL01000003_gene2831	111.0	6.83e-26	N/A	N/A
PHROG	UHGV-0020593_54	phrog_1357	219.8	0	major head protein	head and packaging
UniRef90	UHGV-0020593_54	UniRef90_A0A2V2CFL5	411.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0020593_54	1410650.JHWL01000003_gene2830	280.0	0	N/A	N/A
Pfam	UHGV-0020593_54	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0020593_54	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0020593_54	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020593	Yes	40,792	58	97	1