vOTU vOTU-062551

vOTU: vOTU-062551

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-062551
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-01046 → vSUBGEN-28610 → vOTU-062551
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0177477
Biosample ID	SAMN09781787
Genome length (bp)	31,013 bps
CheckV completeness	90.96% (High-quality)
CDS count	45
CDS density	93.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	154	Host agreement	96.1
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0177477_1	phrog_5110	60.4	2.7e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0177477_1	UniRef90_UPI00195E8788	122.0	8.36e-34	P27 family phage terminase small subunit	N/A
Pfam	UHGV-0177477_1	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0177477_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_2	phrog_9	247.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0177477_2	UniRef90_UPI0018737C02	902.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0177477_2	1235792.C808_00083	596.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0177477_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0177477_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0177477_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0177477_2	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_3	phrog_12	116.8	6.5e-35	portal protein	head and packaging
UniRef90	UHGV-0177477_3	UniRef90_G9YSB8	500.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0177477_3	610130.Closa_0742	292.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0177477_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0177477_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0177477_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0177477_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_4	K01358	133.0	3.2e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0177477_4	phrog_94	247.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0177477_4	UniRef90_A0A1Y4BT12	349.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0177477_4	349161.Dred_2605	307.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0177477_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0177477_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0177477_4	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_5	phrog_10	138.5	7.30006e-41	major head protein	head and packaging
UniRef90	UHGV-0177477_5	UniRef90_G9YSC0	690.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0177477_5	1235792.C808_00086	416.0	0	Phage capsid family	N/A
Pfam	UHGV-0177477_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0177477_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0177477_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0177477_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0177477_5	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_6	phrog_749	68.7	7.4e-20	N/A	unknown function
UniRef90	UHGV-0177477_6	UniRef90_UPI001C0FB8A8	54.7	0.000000123	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0177477_6	349161.Dred_2603	77.8	2.21e-17	N/A	N/A
PHROG	UHGV-0177477_7	phrog_19734	113.8	1.2e-33	N/A	unknown function
UniRef90	UHGV-0177477_7	UniRef90_A0A6I7GNS7	129.0	5.06e-36	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0177477_7	349161.Dred_2602	85.5	8.33e-20	N/A	N/A
structural_annotation	UHGV-0177477_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177477_8	1235798.C817_04588	84.0	2.12e-19	N/A	N/A
structural_annotation	UHGV-0177477_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_9	phrog_5	49.3	0.00000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0177477_9	UniRef90_A0A1C6FG30	137.0	2.32e-38	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0177477_9	908340.HMPREF9406_2573	125.0	2.26e-34	N/A	N/A
structural_annotation	UHGV-0177477_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_10	phrog_88	84.4	1.5e-24	major tail protein	tail
UniRef90	UHGV-0177477_10	UniRef90_G9YSC5	128.0	8.09e-34	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0177477_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0177477_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_13	phrog_6900	254.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0177477_13	UniRef90_A0A7X8M4B4	298.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0177477_13	1216932.CM240_0625	328.0	0	tape measure	N/A
COG	UHGV-0177477_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0177477_13	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_14	phrog_33	72.1	1.4e-20	distal tail protein Dit	tail
UniRef90	UHGV-0177477_14	UniRef90_A0A173Z1X4	179.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0177477_14	1123263.AUKY01000068_gene490	123.0	1.15e-31	tail component	N/A
COG	UHGV-0177477_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0177477_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_15	phrog_1067	291.6	0	minor head protein	head and packaging
UniRef90	UHGV-0177477_15	UniRef90_A0A1C6H6B4	391.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0177477_15	1123263.AUKY01000068_gene489	302.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0177477_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0177477_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0177477_15	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0177477_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177477_16	1121097.JCM15093_1942	55.1	0.000000402	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-0177477_16	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0177477_16	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_17	K01104	47.9	0.00000000000012	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-0177477_17	UniRef90_UPI001BF10870	185.0	0	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-0177477_17	4922.CAY69141	66.6	0.0000000142	Saccharomyces cerevisiae YDL057w	N/A
Pfam	UHGV-0177477_17	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-0177477_17	COG1073	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_18	phrog_199	74.8	9.1e-22	holin	lysis
UniRef90	UHGV-0177477_18	UniRef90_R6DA24	170.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0177477_18	1160721.RBI_I01565	128.0	3.58e-35	Bacteriophage holin family	N/A
Pfam	UHGV-0177477_18	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0177477_18	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0177477_18	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0177477_18	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_19	K01447	85.7	8.8e-25	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0177477_19	phrog_1493	175.1	0	endolysin	lysis
UniRef90	UHGV-0177477_19	UniRef90_A0A350TLR9	312.0	0	Peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0177477_19	1504823.CCMM01000008_gene1019	213.0	0	Ami_2	N/A
Pfam	UHGV-0177477_19	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0177477_19	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0177477_19	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0177477_19	PF01510,PF01471,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_20	K14059	156.4	0	int; integrase	N/A
PHROG	UHGV-0177477_20	phrog_1	148.7	5.04467e-44	integrase	integration and excision
UniRef90	UHGV-0177477_20	UniRef90_UPI001EDEB0AD	265.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0177477_20	1226322.HMPREF1545_00144	247.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0177477_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0177477_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0177477_20	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177477_21	TIGR04165,COG3478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177477_23	1226325.HMPREF1548_05412	72.4	0.00000000000154	Peptidoglycan-binding domain 1 protein	N/A
COG	UHGV-0177477_23	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
UniRef90	UHGV-0177477_24	UniRef90_A0A1Y3ZTC9	113.0	1.63e-30	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0177477_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0177477_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0177477_24	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177477_26	PF14947,NF041230,COG3432	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177477_27	UniRef90_A0A3A8W4L6	99.0	1.51e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0177477_27	397291.C804_05807	89.0	2.03e-22	sequence-specific DNA binding	N/A
COG	UHGV-0177477_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0177477_27	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_28	K22300	47.0	0.00000000000053	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0177477_28	phrog_8	41.2	0.000000000033	transcriptional regulator	transcription regulation
UniRef90	UHGV-0177477_28	UniRef90_UPI000F0D19B9	55.8	0.00000000759	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177477_28	445975.COLSTE_01137	49.3	0.00000425	Peptidase S24-like	N/A
Pfam	UHGV-0177477_28	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0177477_28	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0177477_28	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_29	K22300	41.6	0.000000000027	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0177477_29	phrog_6499	121.9	2.7e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-0177477_29	UniRef90_G9YL68	144.0	4.41998e-41	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0177477_29	742738.HMPREF9460_00847	144.0	5.16939e-42	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0177477_29	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0177477_29	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0177477_29	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_32	phrog_270	116.1	4.4e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177477_32	UniRef90_UPI001F3D92C2	186.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177477_32	742738.HMPREF9460_00851	159.0	4.2039e-45	Helix-turn-helix domain	N/A
Pfam	UHGV-0177477_32	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0177477_32	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0177477_32	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_33	K02314	258.1	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0177477_33	phrog_19	225.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177477_33	UniRef90_UPI00195856D7	386.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0177477_33	1226322.HMPREF1545_00095	253.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0177477_33	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0177477_33	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0177477_33	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0177477_33	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_34	K03496	170.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0177477_34	phrog_164	132.1	4.5e-39	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177477_34	UniRef90_UPI000318E277	282.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0177477_34	1007096.BAGW01000033_gene1614	272.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0177477_34	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0177477_34	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0177477_34	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0177477_35	K03497	73.9	4e-21	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0177477_35	phrog_27290	395.4	0	N/A	unknown function
UniRef90	UHGV-0177477_35	UniRef90_UPI001C029D7C	343.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0177477_35	742738.HMPREF9460_00856	263.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0177477_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0177477_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0177477_35	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0177477_44	phrog_3584	79.0	6e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0177477_44	693746.OBV_19950	244.0	0	N/A	N/A
structural_annotation	UHGV-0177477_44	PF21578,NF041486	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0177477	Yes	31,013	60	91	1
UHGV-0211479	No	31,001	60	91	1