vOTU vOTU-062820

vOTU: vOTU-062820

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-062820
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00087 → vSUBFAM-00679 → vGENUS-05716 → vSUBGEN-03717 → vOTU-062820
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → Phil1 → Phil1 sp001940855
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0024668
Biosample ID	SAMEA4766039
Genome length (bp)	40,222 bps
CheckV completeness	98.28% (High-quality)
CDS count	66
CDS density	92.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-138 → Phil1 → Phil1 sp001940855	Total connections	800	Host agreement	95.5
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0024668_4	phrog_19280	105.5	5.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0024668_4	1160721.RBI_I01569	117.0	4.67e-25	N/A	N/A
Pfam	UHGV-0024668_4	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0024668_6	phrog_18190	276.3	0	N/A	unknown function
UniRef90	UHGV-0024668_6	UniRef90_UPI00143A35E2	236.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0024668_6	1449050.JNLE01000003_gene3879	181.0	2.8026e-45	N/A	N/A
Pfam	UHGV-0024668_6	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-0024668_7	phrog_1194	74.6	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0024668_7	742733.HMPREF9469_01808	114.0	9.91e-31	N/A	N/A
Pfam	UHGV-0024668_7	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0024668_7	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_8	phrog_1535	140.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0024668_8	UniRef90_A0A173WM72	107.0	4.82e-20	Phage-related protein	N/A
eggNOG-mapper	UHGV-0024668_8	1304866.K413DRAFT_3046	113.0	1.62e-22	N/A	N/A
COG	UHGV-0024668_8	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0024668_9	phrog_706	107.9	9.6e-32	N/A	unknown function
UniRef90	UHGV-0024668_9	UniRef90_UPI0011DC8B0C	170.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0024668_9	411902.CLOBOL_00127	171.0	0	N/A	N/A
Pfam	UHGV-0024668_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0024668_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_10	phrog_11299	67.6	2.3e-19	N/A	unknown function
UniRef90	UHGV-0024668_11	UniRef90_A0A8G0W275	62.4	0.0000000137	N/A	N/A
eggNOG-mapper	UHGV-0024668_11	1405498.SSIM_01370	55.8	0.000000653	N/A	N/A
Pfam	UHGV-0024668_11	PF16729	N/A	N/A	N/A	DUF5067
COG	UHGV-0024668_11	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0024668_11	PF16729,PF12773,MF_00791,TIGR04087,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_12	phrog_3099	67.2	2.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0024668_12	1160721.RBI_II00532	80.1	1.53e-16	N/A	N/A
structural_annotation	UHGV-0024668_12	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_13	phrog_3266	76.0	4e-22	tail completion	connector
eggNOG-mapper	UHGV-0024668_13	1280692.AUJL01000004_gene841	67.4	0.00000000000308	N/A	N/A
structural_annotation	UHGV-0024668_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_14	phrog_556	87.8	9.1e-26	minor head protein	head and packaging
UniRef90	UHGV-0024668_14	UniRef90_UPI001958E7C1	153.0	4.2039e-45	minor capsid protein	N/A
eggNOG-mapper	UHGV-0024668_14	665956.HMPREF1032_03062	142.0	1.43003e-41	Minor capsid protein	N/A
Pfam	UHGV-0024668_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0024668_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_15	phrog_3366	70.3	2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0024668_15	411471.SUBVAR_06991	59.3	0.000000000971	N/A	N/A
Pfam	UHGV-0024668_15	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0024668_15	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_16	phrog_541	56.5	4.8e-16	head-tail adaptor	connector
PHROG	UHGV-0024668_17	phrog_10	160.6	0	major head protein	head and packaging
UniRef90	UHGV-0024668_17	UniRef90_UPI00040DB95C	491.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0024668_17	1120998.AUFC01000030_gene2236	491.0	0	Phage capsid family	N/A
Pfam	UHGV-0024668_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0024668_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0024668_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0024668_17	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_18	phrog_2303	57.2	3.1e-16	head scaffolding protein	head and packaging
Pfam	UHGV-0024668_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0024668_19	phrog_581	334.8	0	minor head protein	head and packaging
UniRef90	UHGV-0024668_19	UniRef90_A0A417EY47	365.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0024668_19	1120998.AUFC01000030_gene2233	350.0	0	N/A	N/A
Pfam	UHGV-0024668_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0024668_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024668_19	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_20	phrog_533	366.0	0	portal protein	head and packaging
UniRef90	UHGV-0024668_20	UniRef90_UPI000412491D	535.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0024668_20	1120998.AUFC01000030_gene2232	533.0	0	N/A	N/A
Pfam	UHGV-0024668_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0024668_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0024668_21	K06909	100.2	2.1e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0024668_21	phrog_2	70.4	3.8e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0024668_21	UniRef90_UPI001412C9CB	523.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0024668_21	1292035.H476_1019	392.0	0	Phage terminase large subunit	N/A
COG	UHGV-0024668_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0024668_21	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024668_22	102129.Lepto7375DRAFT_7760	56.6	0.000000018	N/A	N/A
structural_annotation	UHGV-0024668_22	PF13022	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024668_23	446462.Amir_3266	57.8	0.0000000072	N/A	N/A
PHROG	UHGV-0024668_24	phrog_2302	98.7	2.7e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0024668_24	UniRef90_A0A417HAM3	372.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0024668_24	358220.C380_09765	205.0	0	sulfate reduction	N/A
COG	UHGV-0024668_24	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0024668_24	PF01507,MF_00063,TIGR02057,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024668_25	UniRef90_A0A4R1QMH6	82.0	3.77e-19	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0024668_25	445972.ANACOL_00210	75.1	3.41e-17	N/A	N/A
structural_annotation	UHGV-0024668_25	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_26	phrog_15863	155.8	0	N/A	unknown function
UniRef90	UHGV-0024668_26	UniRef90_A0A1Y3R3M0	223.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0024668_26	693746.OBV_01780	177.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0024668_26	PF00226	N/A	N/A	DnaJ domain	DnaJ
COG	UHGV-0024668_26	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
PHROG	UHGV-0024668_29	phrog_21498	173.3	0	N/A	unknown function
UniRef90	UHGV-0024668_29	UniRef90_UPI001C8A2069	159.0	2.8026e-45	chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0024668_29	469378.Ccur_02830	172.0	0	DNA binding	N/A
COG	UHGV-0024668_29	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0024668_30	phrog_21498	63.8	2.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0024668_30	1095750.HMPREF9970_2290	70.1	0.000000000000415	chromosome segregation	N/A
COG	UHGV-0024668_30	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0024668_31	phrog_36	49.7	0.000000000000066	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0024668_31	PF05263,TIGR01636	N/A	N/A	N/A	N/A
Pfam	UHGV-0024668_32	PF02796	N/A	N/A	Helix-turn-helix domain of resolvase	HTH_7
structural_annotation	UHGV-0024668_32	NF040595	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024668_35	UniRef90_A0A2V2FJ47	90.1	6.27e-21	N/A	N/A
Pfam	UHGV-0024668_35	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0024668_38	K21919	55.7	5.8e-16	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0024668_38	phrog_9562	92.4	4.3e-28	N/A	unknown function
UniRef90	UHGV-0024668_38	UniRef90_A0A6N3FDD3	160.0	0	Pentapeptide repeats (8 copies)	N/A
eggNOG-mapper	UHGV-0024668_38	1232443.BAIA02000078_gene49	150.0	2.25609e-43	Pentapeptide repeat protein	N/A
Pfam	UHGV-0024668_38	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0024668_38	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0024668_38	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0024668_38	PF19062,PF13599,NF000139	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_39	phrog_824	141.5	2.79979e-42	N/A	unknown function
UniRef90	UHGV-0024668_39	UniRef90_A0A6N8GXS9	142.0	2.53004e-41	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0024668_39	97139.C824_00735	129.0	1.27e-36	VRR-NUC domain	N/A
Pfam	UHGV-0024668_39	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0024668_40	PF13069	N/A	N/A	N/A	N/A
KOfam	UHGV-0024668_41	K02315	110.9	1.3e-32	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0024668_41	phrog_50	113.1	2.9e-33	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024668_41	UniRef90_A0A410PX27	251.0	0	IstB_IS21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0024668_41	445972.ANACOL_01829	219.0	0	N/A	N/A
Pfam	UHGV-0024668_41	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0024668_41	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0024668_41	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_42	phrog_2149	100.8	1.4e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024668_42	UniRef90_UPI00164BB1D1	79.0	0.0000000000000814	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0024668_42	521460.Athe_2433	95.9	1.35e-19	N/A	N/A
structural_annotation	UHGV-0024668_42	PF01475,TIGR01610,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0024668_43	K03111	130.1	2.7e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0024668_43	phrog_44	127.2	1.1e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024668_43	UniRef90_A0A2V2FMD6	142.0	2.40995e-41	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0024668_43	1485543.JMME01000005_gene988	116.0	9.76e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0024668_43	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0024668_43	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0024668_43	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0024668_43	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0024668_43	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0024668_44	K07455	176.7	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0024668_44	phrog_148	183.0	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024668_44	UniRef90_UPI0018C50A8E	329.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0024668_44	272626.lin2413	214.0	0	Recombinational DNA repair protein (RecE pathway)	N/A
Pfam	UHGV-0024668_44	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0024668_44	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0024668_44	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0024668_44	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0024668_45	phrog_434	314.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0024668_45	UniRef90_A0A1Y4W4B5	327.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0024668_45	1121344.JHZO01000003_gene985	327.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0024668_45	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0024668_45	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0024668_45	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0024668_45	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
Pfam	UHGV-0024668_48	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0024668_48	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0024668_52	UniRef90_UPI0019671B18	78.2	1.64e-17	transcriptional regulator	N/A
Pfam	UHGV-0024668_52	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0024668_52	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0024668_52	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0024668_53	K22299	54.6	0.0000000000000027	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0024668_53	phrog_5823	49.3	0.00000000000007	transcriptional regulator	transcription regulation
UniRef90	UHGV-0024668_53	UniRef90_E6U4C1	75.9	0.00000000000000166	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0024668_53	663278.Ethha_2212	75.9	2.79e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0024668_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0024668_53	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0024668_53	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0024668_54	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0024668_54	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0024668_55	K14059	238.2	0	int; integrase	N/A
PHROG	UHGV-0024668_55	phrog_1	207.0	0	integrase	integration and excision
UniRef90	UHGV-0024668_55	UniRef90_UPI001C0F402D	172.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0024668_55	1408437.JNJN01000039_gene380	148.0	6.12e-38	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0024668_55	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0024668_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0024668_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0024668_55	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024668_57	1408437.JNJN01000043_gene802	144.0	7.95938e-43	N/A	N/A
PHROG	UHGV-0024668_58	phrog_16490	49.1	0.000000000000041	N/A	unknown function
PHROG	UHGV-0024668_59	phrog_21718	43.8	0.0000000000027	N/A	unknown function
eggNOG-mapper	UHGV-0024668_59	476272.RUMHYD_01768	56.6	0.0000000432	N/A	N/A
PHROG	UHGV-0024668_60	phrog_16123	83.4	3.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0024668_60	1064535.MELS_1123	98.6	2e-24	N/A	N/A
Pfam	UHGV-0024668_61	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0024668_61	PF21291,TIGR02607,COG3093	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0024668_65	1042156.CXIVA_25310	52.8	0.00000259	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0024668_65	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0024668_65	PF13384,NF040595	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0024668	Yes	40,222	52	98	1