vOTU vOTU-063150

vOTU: vOTU-063150

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-063150
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00146 → vGENUS-00447 → vSUBGEN-24802 → vOTU-063150
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0151758
Biosample ID	SAMN06115522
Genome length (bp)	34,743 bps
CheckV completeness	98.88% (High-quality)
CDS count	51
CDS density	87.99%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	520	Host agreement	87.5
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	170	Host agreement	94.12

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0151758_1	K06400	370.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0151758_1	phrog_95	375.1	0	integrase	integration and excision
UniRef90	UHGV-0151758_1	UniRef90_C4Z7Z8	963.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-0151758_1	742765.HMPREF9457_02089	483.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0151758_1	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0151758_1	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0151758_1	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0151758_1	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0151758_1	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_2	phrog_2158	244.4	0	abortive infection resistance protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0151758_2	UniRef90_A0A3R6X973	376.0	0	Abi family protein	N/A
eggNOG-mapper	UHGV-0151758_2	397288.C806_00111	389.0	0	Abi-like protein	N/A
PADLOC	UHGV-0151758_2	AbiD	222.8	0	AbiD	Abi
Pfam	UHGV-0151758_2	PF07751	N/A	N/A	Abi-like protein	Abi_2
COG	UHGV-0151758_2	COG4823	N/A	N/A	Abortive infection bacteriophage resistance protein	N/A
structural_annotation	UHGV-0151758_2	PF07751,COG4823	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0151758_3	1408311.JNJM01000007_gene933	152.0	1.16028e-42	N/A	N/A
Pfam	UHGV-0151758_3	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-0151758_5	K22300	52.9	0.0000000000000085	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0151758_5	phrog_8	80.6	2.8e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0151758_5	UniRef90_UPI00156FB04E	122.0	5.15e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_5	1235790.C805_00362	112.0	3.35e-30	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0151758_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0151758_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0151758_5	PF01381,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0151758_6	UniRef90_A0A355TLU7	114.0	3.24e-32	N/A	N/A
eggNOG-mapper	UHGV-0151758_6	1121335.Clst_0370	97.8	2.81e-26	N/A	N/A
Pfam	UHGV-0151758_6	PF02954	N/A	N/A	Bacterial regulatory protein, Fis family	HTH_8
structural_annotation	UHGV-0151758_6	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_11	phrog_9607	105.4	5.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0151758_11	1304866.K413DRAFT_4639	113.0	2.74e-29	N/A	N/A
structural_annotation	UHGV-0151758_11	PF02883,MF_00791,NF012200,COG3354	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151758_12	PF09486,TIGR03090,COG5420	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_17	phrog_3584	134.5	8e-40	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0151758_17	483218.BACPEC_01173	211.0	0	N/A	N/A
structural_annotation	UHGV-0151758_17	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_18	K03469	60.7	3.3e-17	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0151758_18	phrog_531	60.4	3.2e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0151758_18	UniRef90_C4Z812	301.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0151758_18	635013.TherJR_1738	75.1	0.00000000000000367	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0151758_18	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0151758_18	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0151758_18	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151758_19	PF18066,NF007780,COG1544	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_20	K03427	51.2	0.000000000000018	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0151758_20	phrog_5696	231.5	0	N/A	unknown function
UniRef90	UHGV-0151758_20	UniRef90_A0A0M6WYD5	429.0	0	N6_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_20	1235457.C404_25710	148.0	7.58004e-41	N-6 DNA Methylase	N/A
Pfam	UHGV-0151758_20	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0151758_20	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0151758_20	COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_21	K04763	222.2	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0151758_21	phrog_1	156.4	0	integrase	integration and excision
UniRef90	UHGV-0151758_21	UniRef90_A0A6L5YHS5	347.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0151758_21	397291.C804_01139	239.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0151758_21	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0151758_21	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0151758_21	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0151758_21	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_22	K14059	162.3	0	int; integrase	N/A
PHROG	UHGV-0151758_22	phrog_1	157.2	0	integrase	integration and excision
UniRef90	UHGV-0151758_22	UniRef90_A0A0M6WVP0	611.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_22	1280698.AUJS01000010_gene818	312.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0151758_22	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0151758_22	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0151758_22	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0151758_22	PF00589,PF14659,MF_02055,NF001399,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0151758_23	UniRef90_A0A417WAJ1	122.0	8.99e-34	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0151758_23	1235800.C819_02254	124.0	2.97e-35	HNH nucleases	N/A
PHROG	UHGV-0151758_26	phrog_36	62.3	1.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0151758_26	UniRef90_A0A1V4SJ45	52.8	0.00000645	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_26	588581.Cpap_2562	64.3	0.0000000000443	N/A	N/A
structural_annotation	UHGV-0151758_26	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_31	phrog_3996	101.5	5.5e-30	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0151758_31	UniRef90_A0A1C5MP22	155.0	1.4013e-45	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0151758_31	585501.HMPREF6123_0812	126.0	8.72e-35	N/A	N/A
Pfam	UHGV-0151758_31	PF10097	N/A	N/A	N/A	DUF2335
COG	UHGV-0151758_31	COG5346	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_32	K07451	44.8	0.0000000000022	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0151758_32	phrog_119	79.4	4.9e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0151758_32	UniRef90_A0A0M6WIX4	189.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_32	1232452.BAIB02000007_gene1631	90.1	5.8e-22	HNH nucleases	N/A
Pfam	UHGV-0151758_32	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0151758_32	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0151758_33	phrog_5110	95.4	3.7e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0151758_33	UniRef90_A0A1C5LZF0	106.0	6.04e-27	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0151758_33	1211817.CCAT010000008_gene938	75.5	0.00000000000000266	Phage terminase, small subunit	N/A
Pfam	UHGV-0151758_33	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0151758_33	COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_34	phrog_9	245.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0151758_34	UniRef90_D4M588	1023.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0151758_34	1232452.BAIB02000007_gene1629	543.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0151758_34	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0151758_34	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0151758_34	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0151758_34	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_35	phrog_12	64.9	8.4e-19	portal protein	head and packaging
UniRef90	UHGV-0151758_35	UniRef90_UPI00156D5DC9	563.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0151758_35	1232452.BAIB02000007_gene1627	293.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0151758_35	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0151758_35	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0151758_35	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_36	K01358	109.1	5.8e-32	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0151758_36	phrog_94	181.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0151758_36	UniRef90_A0A350VIU3	430.0	0	ATP-dependent Clp protease proteolytic subunit (Fragment)	N/A
eggNOG-mapper	UHGV-0151758_36	1235792.C808_00085	200.0	0	Clp protease	N/A
Pfam	UHGV-0151758_36	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0151758_36	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0151758_36	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_37	phrog_10	75.9	4.7e-22	major head protein	head and packaging
UniRef90	UHGV-0151758_37	UniRef90_UPI00156F222D	639.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0151758_37	1232452.BAIB02000007_gene1625	486.0	0	Phage capsid family	N/A
Pfam	UHGV-0151758_37	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0151758_37	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0151758_37	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0151758_37	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0151758_39	UniRef90_UPI00189B1559	191.0	0	phage head closure protein	N/A
structural_annotation	UHGV-0151758_39	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151758_40	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_41	phrog_5	55.5	0.0000000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0151758_41	UniRef90_D4M595	169.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0151758_41	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0151758_41	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_42	phrog_88	107.4	1.2e-31	major tail protein	tail
UniRef90	UHGV-0151758_42	UniRef90_A0A1Q9J4Y1	276.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0151758_42	1487921.DP68_11355	54.3	0.0000021	phage major tail protein	N/A
NCBIFam	UHGV-0151758_42	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0151758_42	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0151758_42	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_44	K10421	46.4	0.00000000000026	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0151758_44	phrog_23464	186.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0151758_44	1232452.BAIB02000007_gene1616	462.0	0	phage tail tape measure protein	N/A
COG	UHGV-0151758_44	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0151758_45	phrog_33	58.5	1.7e-16	distal tail protein Dit	tail
UniRef90	UHGV-0151758_45	UniRef90_A0A350VIV2	358.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0151758_45	1232452.BAIB02000007_gene1615	218.0	0	phage tail	N/A
NCBIFam	UHGV-0151758_45	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0151758_45	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0151758_45	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_46	phrog_13289	367.6	0	tail protein	tail
UniRef90	UHGV-0151758_46	UniRef90_A0A0M6WI67	992.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_46	1235798.C817_02568	447.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0151758_46	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0151758_46	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0151758_46	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0151758_46	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0151758_47	phrog_11037	140.1	1.99993e-41	N/A	unknown function
UniRef90	UHGV-0151758_47	UniRef90_A0A0M6WKQ1	288.0	0	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_47	33035.JPJF01000023_gene3229	154.0	3.33509e-43	N/A	N/A
Pfam	UHGV-0151758_47	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
structural_annotation	UHGV-0151758_47	PF18013	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_48	K10804	47.1	0.00000000000039	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-0151758_48	phrog_5240	48.2	0.0000000000001	tail fiber protein	tail
eggNOG-mapper	UHGV-0151758_48	1235798.C817_04596	63.5	0.000000114	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0151758_48	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-0151758_48	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0151758_50	phrog_199	70.4	2.1e-20	holin	lysis
UniRef90	UHGV-0151758_50	UniRef90_A0A174GVG0	267.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0151758_50	411462.DORLON_00766	186.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0151758_50	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0151758_50	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0151758_50	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0151758_50	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0151758_51	K01448	98.4	9.1e-29	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0151758_51	phrog_435	157.7	0	endolysin	lysis
UniRef90	UHGV-0151758_51	UniRef90_A0A355TJT7	513.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0151758_51	1469948.JPNB01000001_gene537	195.0	0	hmm pf01520	N/A
Pfam	UHGV-0151758_51	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0151758_51	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0151758_51	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0151758	Yes	34,743	39	99	1