vOTU vOTU-063394

vOTU: vOTU-063394

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-063394
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00143 → vSUBFAM-01058 → vGENUS-00980 → vSUBGEN-00470 → vOTU-063394
Host lineage	Bacteria → Patescibacteria → Saccharimonadia → Saccharimonadales → Saccharimonadaceae → Saccharimonas → Saccharimonas sp015257605
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1416083
Biosample ID	SAMEA2738010
Genome length (bp)	34,827 bps
CheckV completeness	99.87% (High-quality)
CDS count	58
CDS density	93.74%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Patescibacteria → Saccharimonadia → Saccharimonadales → Saccharimonadaceae → Saccharimonas → Saccharimonas sp015257605	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1416083_1	phrog_38	77.1	2.1e-22	terminase large subunit	head and packaging
eggNOG-mapper	UHGV-1416083_1	797304.Natgr_3429	168.0	8.40779e-45	chromosome segregation	N/A
COG	UHGV-1416083_1	COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-1416083_4	K03111	115.0	1.1e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1416083_4	phrog_44	103.5	2.5e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1416083_4	UniRef90_A0A660MA96	260.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1416083_4	1162668.LFE_0853	105.0	3.82e-27	Single-strand binding protein family	N/A
Pfam	UHGV-1416083_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1416083_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1416083_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1416083_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1416083_4	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_5	phrog_3784	48.3	0.00000000000016	N/A	unknown function
KOfam	UHGV-1416083_10	K03497	53.7	0.0000000000000043	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1416083_10	phrog_620	111.4	6.2e-33	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1416083_10	UniRef90_A0A660M9I2	739.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1416083_10	909663.KI867149_gene3250	94.0	3.04e-18	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1416083_10	MTase_II_00015	55.4	0.0000000000000011	Type II methyltransferase	RM
Pfam	UHGV-1416083_10	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1416083_10	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1416083_10	PF02195,PF01170,MF_02015,MF_01872,TIGR01177,TIGR04285,COG1041,COG5119	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1416083_13	PF11305,NF033216	N/A	N/A	N/A	N/A
UniRef90	UHGV-1416083_14	UniRef90_A0A660MCT5	427.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1416083_16	272134.KB731324_gene3488	60.1	0.000000154	tape measure	N/A
Pfam	UHGV-1416083_16	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-1416083_16	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-1416083_17	UniRef90_A0A660MCK6	231.0	0	GH16 domain-containing protein	N/A
eggNOG-mapper	UHGV-1416083_17	1122176.KB903553_gene3639	66.6	0.000000000694	Glycosyl hydrolases family 16	N/A
COG	UHGV-1416083_17	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
KOfam	UHGV-1416083_26	K18955	87.0	3.9e-25	whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator	N/A
PHROG	UHGV-1416083_26	phrog_1333	67.9	1.7e-19	N/A	unknown function
UniRef90	UHGV-1416083_26	UniRef90_A0A660MB49	188.0	0	WhiB family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1416083_26	1122994.AUFR01000031_gene613	72.0	0.00000000000000171	Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA	N/A
Pfam	UHGV-1416083_26	PF02467	N/A	N/A	Transcription factor WhiB	Whib
structural_annotation	UHGV-1416083_26	PF02467,MF_01479	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_30	phrog_824	40.4	0.000000000019	N/A	unknown function
PHROG	UHGV-1416083_32	phrog_155	113.1	2.6e-33	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1416083_32	UniRef90_A0A416D916	94.0	1.15e-19	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1416083_32	1397699.JNIS01000001_gene2444	85.9	1.77e-17	ERF superfamily	N/A
Pfam	UHGV-1416083_32	PF04404	N/A	N/A	ERF superfamily	ERF
UniRef90	UHGV-1416083_36	UniRef90_A0A660MB57	652.0	0	N/A	N/A
Pfam	UHGV-1416083_36	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1416083_36	PF13946	N/A	N/A	N/A	DUF4214
COG	UHGV-1416083_36	COG2340	N/A	N/A	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	N/A
PHROG	UHGV-1416083_40	phrog_3398	49.4	0.000000000000068	virion structural protein	head and packaging
eggNOG-mapper	UHGV-1416083_40	1196031.ALEG01000039_gene1828	56.2	0.00000388	N/A	N/A
PHROG	UHGV-1416083_44	phrog_1885	84.6	1e-24	minor tail protein	tail
structural_annotation	UHGV-1416083_44	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_45	phrog_5577	110.0	2.3e-32	minor tail protein	tail
UniRef90	UHGV-1416083_45	UniRef90_A0A660MA29	533.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-1416083_45	1280692.AUJL01000004_gene834	76.3	0.000000000000258	Phage tail protein	N/A
Pfam	UHGV-1416083_45	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-1416083_45	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1416083_45	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_46	phrog_991	367.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1416083_46	UniRef90_A0A660MB66	1119.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1416083_46	697281.Mahau_2902	273.0	0	tail tape measure protein TP901 core region	N/A
Pfam	UHGV-1416083_46	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1416083_46	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1416083_46	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1416083_46	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_48	phrog_290	80.5	2.1e-23	minor tail protein	tail
eggNOG-mapper	UHGV-1416083_48	234621.RER_25210	114.0	9.44e-27	N/A	N/A
Pfam	UHGV-1416083_48	PF18906	N/A	N/A	Phage tail tube protein	Phage_tube_2
structural_annotation	UHGV-1416083_48	PF18906,TIGR02241,TIGR02126,COG5437,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_51	phrog_5	41.6	0.000000000028	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-1416083_51	234621.RER_25180	69.3	0.000000000000968	N/A	N/A
PHROG	UHGV-1416083_53	phrog_442	80.9	1.5e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-1416083_53	234621.RER_25160	65.9	0.0000000000918	N/A	N/A
Pfam	UHGV-1416083_53	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1416083_53	TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_55	phrog_10	186.3	0	major head protein	head and packaging
UniRef90	UHGV-1416083_55	UniRef90_A0A660MB76	677.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1416083_55	1429046.RR21198_3995	152.0	1.24e-39	Phage capsid family	N/A
Pfam	UHGV-1416083_55	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1416083_55	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1416083_55	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1416083_55	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1416083_56	phrog_617	52.0	0.0000000000000064	major head protein	head and packaging
COG	UHGV-1416083_56	COG3740	N/A	N/A	Phage head maturation protease	N/A
PHROG	UHGV-1416083_57	phrog_2662	363.2	0	portal protein	head and packaging
UniRef90	UHGV-1416083_57	UniRef90_A0A660MAD9	1348.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1416083_57	234621.RER_25110	266.0	0	Portal protein	N/A
Pfam	UHGV-1416083_57	PF04860	N/A	N/A	Phage portal protein	Phage_portal
Pfam	UHGV-1416083_57	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1416083_57	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1416083_57	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
eggNOG-mapper	UHGV-1416083_58	797304.Natgr_3429	90.5	1.47e-19	chromosome segregation	N/A
COG	UHGV-1416083_58	COG5410	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1416083	Yes	34,827	49	100	1