vOTU vOTU-063777

vOTU: vOTU-063777

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-063777
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-03044 → vGENUS-06152 → vSUBGEN-31490 → vOTU-063777
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Coprococcus → Coprococcus eutactus
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1005089
Biosample ID	N/A
Genome length (bp)	29,238 bps
CheckV completeness	99.90% (High-quality)
CDS count	51
CDS density	94.85%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Coprococcus → Coprococcus eutactus	Total connections	5	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1005089_1	phrog_338	55.1	0.0000000000000018	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1005089_1	UniRef90_UPI00156E0A7C	190.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1005089_1	748224.HMPREF9436_01465	166.0	0	N/A	N/A
PHROG	UHGV-1005089_2	phrog_36	84.9	1.1e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1005089_2	UniRef90_A0A413B185	89.0	5.88e-20	N/A	N/A
eggNOG-mapper	UHGV-1005089_2	1235800.C819_02243	82.4	3.43e-18	N/A	N/A
structural_annotation	UHGV-1005089_2	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_4	phrog_355	82.3	5.2e-24	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1005089_4	UniRef90_UPI001BBBA8BA	102.0	2.29e-26	N/A	N/A
eggNOG-mapper	UHGV-1005089_4	521000.PROVRETT_06001	73.6	0.00000000000000135	N/A	N/A
Pfam	UHGV-1005089_4	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1005089_4	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1005089_4	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1005089_6	1519439.JPJG01000059_gene1909	64.7	0.000000000000583	N/A	N/A
UniRef90	UHGV-1005089_7	UniRef90_UPI001594A542	152.0	1.44334e-43	N/A	N/A
eggNOG-mapper	UHGV-1005089_7	742733.HMPREF9469_00921	149.0	4.56823e-43	N/A	N/A
structural_annotation	UHGV-1005089_7	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_8	phrog_15198	43.6	0.0000000000053	N/A	unknown function
UniRef90	UHGV-1005089_8	UniRef90_A0A1H4JD22	55.5	0.000000127	N/A	N/A
eggNOG-mapper	UHGV-1005089_8	742723.HMPREF9477_00919	51.6	0.00000389	N/A	N/A
PHROG	UHGV-1005089_9	phrog_17690	96.7	1.6e-28	N/A	unknown function
UniRef90	UHGV-1005089_9	UniRef90_A0A6L5XWF4	79.7	1.23e-16	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-1005089_9	33035.JPJF01000107_gene432	94.7	2.88e-23	N/A	N/A
PHROG	UHGV-1005089_10	phrog_15077	60.5	3.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-1005089_10	742740.HMPREF9474_03494	84.3	3.36e-17	N/A	N/A
PHROG	UHGV-1005089_11	phrog_7566	107.3	6.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-1005089_11	411459.RUMOBE_00948	128.0	8.35e-37	N/A	N/A
eggNOG-mapper	UHGV-1005089_12	411468.CLOSCI_00555	62.4	0.00000000231	N/A	N/A
KOfam	UHGV-1005089_13	K03111	131.6	1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1005089_13	phrog_44	135.8	3e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1005089_13	UniRef90_A0A7G9G0M5	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1005089_13	511680.BUTYVIB_00906	188.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1005089_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1005089_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1005089_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1005089_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1005089_13	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_15	phrog_531	44.5	0.0000000000028	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1005089_15	UniRef90_F3AAS5	116.0	9.83e-31	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1005089_15	573065.Astex_1568	56.2	0.0000000594	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1005089_15	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1005089_15	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1005089_15	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_16	phrog_3584	177.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1005089_16	UniRef90_A0A1I5LZL1	162.0	1.4013e-45	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1005089_16	1196322.A370_05744	188.0	0	N/A	N/A
structural_annotation	UHGV-1005089_16	PF21578	N/A	N/A	N/A	N/A
UniRef90	UHGV-1005089_20	UniRef90_A0A3N1XLV2	148.0	8.2e-39	DNA-directed RNA polymerase subunit M/transcription elongation factor TFIIS	N/A
eggNOG-mapper	UHGV-1005089_20	180332.JTGN01000007_gene3778	80.5	0.00000000000000772	N/A	N/A
eggNOG-mapper	UHGV-1005089_21	1235799.C818_01423	125.0	4.14e-31	oxidoreductase activity	N/A
COG	UHGV-1005089_21	COG2304	N/A	N/A	Secreted protein containing bacterial Ig-like domain and vWFA domain	N/A
KOfam	UHGV-1005089_22	K01448	57.5	2.4e-16	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1005089_22	phrog_435	82.7	6.8e-24	endolysin	lysis
UniRef90	UHGV-1005089_22	UniRef90_A0A3A9BMQ4	120.0	8.75e-29	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1005089_22	1408437.JNJN01000039_gene391	96.7	7.42e-21	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1005089_22	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1005089_22	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1005089_22	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-1005089_23	phrog_1129	71.6	7.7e-21	holin	lysis
UniRef90	UHGV-1005089_23	UniRef90_UPI001C1096AE	124.0	1.95e-35	phage holin family protein	N/A
eggNOG-mapper	UHGV-1005089_23	702450.CUW_0551	101.0	6.06e-27	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1005089_23	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1005089_23	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1005089_24	K01447	61.2	2.2e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1005089_24	phrog_5182	117.5	1.9e-34	endolysin	lysis
UniRef90	UHGV-1005089_24	UniRef90_A0A7G9G6X7	462.0	0	Amidase	N/A
eggNOG-mapper	UHGV-1005089_24	1286171.EAL2_c05470	107.0	2.13e-24	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1005089_24	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1005089_24	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1005089_24	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1005089_24	PF01510,PF18342,MF_04111,NF008758,NF040670,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_25	phrog_1129	79.3	3e-23	holin	lysis
UniRef90	UHGV-1005089_25	UniRef90_A0A415MF35	131.0	2.74e-38	Holin	N/A
eggNOG-mapper	UHGV-1005089_25	702450.CUW_0551	117.0	2.94e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1005089_25	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1005089_25	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_26	phrog_937	51.2	0.000000000000026	hemolysin	other
UniRef90	UHGV-1005089_26	UniRef90_A0A385E0Y4	52.8	0.00000131	Hemolysin	N/A
eggNOG-mapper	UHGV-1005089_26	742740.HMPREF9474_03172	63.5	0.0000000000121	N/A	N/A
PHROG	UHGV-1005089_28	phrog_13589	188.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1005089_28	411460.RUMTOR_01324	242.0	0	N/A	N/A
PHROG	UHGV-1005089_30	phrog_1084	40.9	0.000000000032	N/A	unknown function
eggNOG-mapper	UHGV-1005089_30	428125.CLOLEP_01432	58.2	0.00000000162	N/A	N/A
structural_annotation	UHGV-1005089_30	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_31	phrog_5811	102.9	2.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-1005089_31	1469948.JPNB01000001_gene705	115.0	1.68e-26	Glycine rich protein	N/A
PHROG	UHGV-1005089_32	phrog_7064	155.1	0	tail protein	tail
eggNOG-mapper	UHGV-1005089_32	1235800.C819_04023	282.0	0	N/A	N/A
structural_annotation	UHGV-1005089_32	PF14594,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_33	phrog_20385	95.7	2.6e-28	minor tail protein	tail
eggNOG-mapper	UHGV-1005089_33	397287.C807_03967	207.0	0	N/A	N/A
structural_annotation	UHGV-1005089_33	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_34	phrog_6900	265.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1005089_34	12390.Q77MU4_9CAUD	327.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1005089_34	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_35	phrog_1633	135.8	1.6e-40	N/A	unknown function
UniRef90	UHGV-1005089_35	UniRef90_A0A4U9XLC7	108.0	3.16e-28	N/A	N/A
eggNOG-mapper	UHGV-1005089_35	873448.STRPO_0293	108.0	5.3e-29	N/A	N/A
Pfam	UHGV-1005089_35	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1005089_35	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_36	phrog_1526	72.5	5.6e-21	N/A	unknown function
eggNOG-mapper	UHGV-1005089_36	879308.HMPREF9130_1240	62.4	0.0000000000132	N/A	N/A
PHROG	UHGV-1005089_37	phrog_117	167.7	0	major tail protein	tail
UniRef90	UHGV-1005089_37	UniRef90_A0A844E2C0	245.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1005089_37	1280698.AUJS01000007_gene1044	229.0	0	domain, Protein	N/A
COG	UHGV-1005089_37	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1005089_37	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_38	phrog_123	64.0	2.8e-18	tail terminator	connector
eggNOG-mapper	UHGV-1005089_38	1280698.AUJS01000007_gene1043	127.0	8.38e-37	N/A	N/A
structural_annotation	UHGV-1005089_38	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_39	phrog_387	61.0	1.9e-17	neck protein	connector
UniRef90	UHGV-1005089_39	UniRef90_A0A380KNT4	67.8	0.000000000000303	N/A	N/A
eggNOG-mapper	UHGV-1005089_39	1423775.BAMN01000011_gene600	82.4	8.2e-20	N/A	N/A
PHROG	UHGV-1005089_40	phrog_501	96.5	2.1e-28	head closure Hc1	connector
eggNOG-mapper	UHGV-1005089_40	665950.HMPREF1025_02528	171.0	0	N/A	N/A
structural_annotation	UHGV-1005089_40	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_41	phrog_137	63.8	2.4e-18	head-tail adaptor Ad1	connector
UniRef90	UHGV-1005089_41	UniRef90_E2ZGA8	117.0	8.6e-32	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1005089_41	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1005089_41	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_43	phrog_10	110.1	2.6e-32	major head protein	head and packaging
UniRef90	UHGV-1005089_43	UniRef90_A0A844E6Z2	430.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1005089_43	205876.Q855V6_9CAUD	288.0	0	peptidase activity	N/A
Pfam	UHGV-1005089_43	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1005089_43	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1005089_43	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_44	phrog_1793	87.6	2.1e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-1005089_44	UniRef90_A0A412EZF6	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-1005089_44	1408304.JAHA01000007_gene1323	101.0	9.97e-26	N/A	N/A
Pfam	UHGV-1005089_44	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1005089_44	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_45	phrog_13199	72.5	3.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-1005089_45	476272.RUMHYD_02851	94.7	9.68e-25	N/A	N/A
PHROG	UHGV-1005089_46	phrog_918	87.9	3e-26	N/A	unknown function
UniRef90	UHGV-1005089_46	UniRef90_UPI00156D5D02	158.0	0	N/A	N/A
eggNOG-mapper	UHGV-1005089_46	537007.BLAHAN_05515	153.0	0	N/A	N/A
Pfam	UHGV-1005089_46	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1005089_46	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_47	phrog_193	125.6	5.9e-37	head maturation protease	head and packaging
UniRef90	UHGV-1005089_47	UniRef90_A0A6N8H118	477.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1005089_47	748224.HMPREF9436_01469	234.0	0	N/A	N/A
COG	UHGV-1005089_47	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
PHROG	UHGV-1005089_48	phrog_104	223.9	0	portal protein	head and packaging
UniRef90	UHGV-1005089_48	UniRef90_A0A174L3Q9	783.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1005089_48	1123263.AUKY01000112_gene2059	553.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1005089_48	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1005089_48	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1005089_49	phrog_9	178.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1005089_49	UniRef90_UPI001D0087E2	783.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1005089_49	1123263.AUKY01000112_gene2060	661.0	0	phage terminase, large subunit	N/A
Pfam	UHGV-1005089_49	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1005089_49	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1005089_49	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-1005089_50	UniRef90_R6GFM0	109.0	2.15e-29	Conserved domain protein	N/A
structural_annotation	UHGV-1005089_50	PF19962	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1005089	Yes	29,238	49	100	1