vOTU vOTU-063877

vOTU: vOTU-063877

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-063877
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella
Taxonomy (UHGV)	vFAM-00162 → vSUBFAM-01610 → vGENUS-01668 → vSUBGEN-13796 → vOTU-063877
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1509928
Biosample ID	SAMN02333943
Genome length (bp)	36,301 bps
CheckV completeness	93.83% (High-quality)
CDS count	50
CDS density	93.13%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella	Total connections	73	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Selenomonadales → Selenomonadaceae → Mitsuokella	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1509928_1	phrog_31	391.0	0	baseplate hub protein Tal	tail
UniRef90	UHGV-1509928_1	UniRef90_G5GM53	1144.0	0	Phage-tail_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509928_1	679201.HMPREF9334_00334	1144.0	0	cellulase activity	N/A
Pfam	UHGV-1509928_1	PF13550	N/A	N/A	Putative phage tail protein	Phage-tail_3
COG	UHGV-1509928_1	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509928_1	PF13550,PF00041,PF14451,PF14879,MF_00460,NF040662,NF006231,TIGR04488,COG4733,COG1977	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_2	K13695	67.8	1.8e-19	nlpC; probable lipoprotein NlpC	N/A
PHROG	UHGV-1509928_2	phrog_329	68.1	8.5e-20	minor tail protein	tail
UniRef90	UHGV-1509928_2	UniRef90_G5GM52	193.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509928_2	679201.HMPREF9334_00333	193.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1509928_2	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-1509928_2	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1509928_2	PF00877,NF008096,COG3234	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_3	K00571	74.5	2.1e-21	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1509928_3	phrog_12862	173.7	0	N/A	unknown function
UniRef90	UHGV-1509928_3	UniRef90_A0A0V8DQJ7	173.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1509928_3	868131.MSWAN_1609	166.0	0	methylase	N/A
PADLOC	UHGV-1509928_3	MTase_II_00037	164.3	0	Type II methyltransferase	RM
COG	UHGV-1509928_3	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1509928_3	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_4	phrog_18	61.9	8.6e-18	minor tail protein	tail
UniRef90	UHGV-1509928_4	UniRef90_A0A4R3K4E0	231.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1509928_4	679201.HMPREF9334_00332	304.0	0	N/A	N/A
Pfam	UHGV-1509928_4	PF05100	N/A	N/A	Phage minor tail protein L	Phage_tail_L
COG	UHGV-1509928_4	COG4672	N/A	N/A	Phage tail protein	N/A
structural_annotation	UHGV-1509928_4	PF08875,TIGR01600,COG4672	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1509928_5	679201.HMPREF9334_00331	137.0	2.73e-40	N/A	N/A
structural_annotation	UHGV-1509928_5	PF05939,TIGR02217,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_6	phrog_18863	157.3	0	N/A	unknown function
UniRef90	UHGV-1509928_6	UniRef90_A0A414NZU2	1118.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-1509928_6	679201.HMPREF9334_00330	508.0	0	tape measure	N/A
Pfam	UHGV-1509928_6	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-1509928_6	COG4805	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509928_6	TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_7	phrog_7377	60.1	4.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-1509928_7	592028.GCWU000321_01385	87.0	5.52e-21	N/A	N/A
structural_annotation	UHGV-1509928_8	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_9	phrog_1407	118.2	4.4e-35	major tail protein	tail
UniRef90	UHGV-1509928_9	UniRef90_A0A1H7A3W7	163.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-1509928_9	1111454.HMPREF1250_0257	133.0	2.62e-36	Phage tail tube protein	N/A
Pfam	UHGV-1509928_9	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-1509928_9	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1509928_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_10	phrog_176	44.6	0.0000000000000014	tail terminator	connector
UniRef90	UHGV-1509928_10	UniRef90_UPI0008DA5300	99.4	8.32e-24	N/A	N/A
eggNOG-mapper	UHGV-1509928_10	679201.HMPREF9334_00326	87.0	7.65e-20	N/A	N/A
Pfam	UHGV-1509928_10	PF11367	N/A	N/A	N/A	DUF3168
structural_annotation	UHGV-1509928_10	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_11	phrog_5	66.0	9.2e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1509928_11	UniRef90_UPI0018C66872	125.0	5.24e-34	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1509928_11	861450.HMPREF0080_02051	83.2	2.44e-18	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1509928_11	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
COG	UHGV-1509928_11	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1509928_11	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509928_12	UniRef90_A0A4R3K4Q6	72.0	0.0000000000000341	Head-tail adaptor	N/A
eggNOG-mapper	UHGV-1509928_12	910314.HMPREF9220_1092	58.5	0.00000000111	Phage head-tail joining protein	N/A
Pfam	UHGV-1509928_12	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-1509928_12	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
NCBIFam	UHGV-1509928_13	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1509928_13	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_15	phrog_10	121.5	9.3e-36	major head protein	head and packaging
UniRef90	UHGV-1509928_15	UniRef90_A0A0U1L1V2	339.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1509928_15	1123288.SOV_2c03610	339.0	0	Phage capsid family	N/A
Pfam	UHGV-1509928_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1509928_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1509928_15	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_16	K06904	124.2	1.3e-36	N/A	N/A
PHROG	UHGV-1509928_16	phrog_80	143.2	2.49992e-42	head maturation protease	head and packaging
UniRef90	UHGV-1509928_16	UniRef90_I0GRZ1	260.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-1509928_16	927704.SELR_18200	260.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1509928_16	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1509928_16	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1509928_16	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1509928_16	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_17	phrog_29023	159.4	0	N/A	unknown function
UniRef90	UHGV-1509928_17	UniRef90_I0GRZ2	538.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-1509928_17	927704.SELR_18210	538.0	0	Phage portal protein	N/A
Pfam	UHGV-1509928_17	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1509928_17	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1509928_17	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_18	phrog_9	302.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1509928_18	UniRef90_I0GRZ3	764.0	0	Putative phage terminase	N/A
eggNOG-mapper	UHGV-1509928_18	927704.SELR_18220	764.0	0	Phage Terminase	N/A
Pfam	UHGV-1509928_18	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1509928_18	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1509928_18	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1509928_18	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_19	phrog_1066	47.5	0.00000000000031	N/A	unknown function
UniRef90	UHGV-1509928_19	UniRef90_A0A316MDS1	107.0	3.71e-28	Zinc-binding protein	N/A
eggNOG-mapper	UHGV-1509928_19	1123288.SOV_2c03670	97.8	3.91e-25	N/A	N/A
structural_annotation	UHGV-1509928_19	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_20	phrog_4581	102.3	4.8e-30	terminase small subunit	head and packaging
UniRef90	UHGV-1509928_20	UniRef90_UPI001D0121F4	265.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1509928_20	927704.SELR_18240	262.0	0	adenylate kinase activity	N/A
Pfam	UHGV-1509928_20	PF01844	N/A	N/A	HNH endonuclease	HNH
Pfam	UHGV-1509928_20	PF13671	N/A	N/A	AAA domain	AAA_33
COG	UHGV-1509928_20	COG0563	N/A	N/A	Adenylate kinase or related kinase	N/A
structural_annotation	UHGV-1509928_20	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_21	K07474	85.2	1.4e-24	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1509928_21	phrog_2606	157.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-1509928_21	UniRef90_C4Z826	150.0	1.15e-40	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1509928_21	1415774.U728_838	119.0	2.79e-29	terminase, small subunit	N/A
Pfam	UHGV-1509928_21	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
Pfam	UHGV-1509928_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1509928_21	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1509928_21	PF03592,PF06056,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_23	phrog_36	64.8	1.6e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1509928_23	UniRef90_UPI000DA60FA2	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1509928_23	1392502.JNIO01000008_gene1304	186.0	0	DNA-templated transcription, initiation	N/A
COG	UHGV-1509928_23	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-1509928_23	PF06530,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_26	K06940	46.6	0.0000000000007	N/A	N/A
PHROG	UHGV-1509928_26	phrog_32498	94.0	1.1e-27	N/A	unknown function
UniRef90	UHGV-1509928_26	UniRef90_A0A6N2TW79	84.7	4.38e-18	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-1509928_26	397290.C810_01479	86.7	1.28e-19	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-1509928_26	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
KOfam	UHGV-1509928_27	K03111	159.8	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1509928_27	phrog_44	157.7	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509928_27	UniRef90_I0GSV3	210.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1509928_27	927704.SELR_21320	210.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1509928_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1509928_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1509928_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1509928_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1509928_27	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1509928_30	UniRef90_A0A414NWC8	77.4	1.3e-16	DNA-binding protein	N/A
Pfam	UHGV-1509928_30	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
KOfam	UHGV-1509928_35	K03497	95.7	8e-28	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1509928_35	phrog_15982	157.4	0	N/A	unknown function
UniRef90	UHGV-1509928_35	UniRef90_UPI0004238EA6	259.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1509928_35	1280706.AUJE01000010_gene636	259.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1509928_35	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1509928_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1509928_35	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_37	K03496	211.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1509928_37	phrog_164	167.8	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509928_37	UniRef90_A0A1H0P4D7	364.0	0	Chromosome partitioning protein	N/A
eggNOG-mapper	UHGV-1509928_37	1280706.AUJE01000010_gene635	359.0	0	AAA domain	N/A
Pfam	UHGV-1509928_37	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1509928_37	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1509928_37	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_38	K03700	61.2	2e-17	recU; recombination protein U	N/A
PHROG	UHGV-1509928_38	phrog_843	122.5	2.3e-36	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1509928_38	UniRef90_A0A1H0P4X6	204.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-1509928_38	1392502.JNIO01000008_gene1290	203.0	0	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-1509928_38	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-1509928_38	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-1509928_38	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
PHROG	UHGV-1509928_39	phrog_3584	117.5	9.1e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1509928_39	1392502.JNIO01000002_gene51	298.0	0	N/A	N/A
structural_annotation	UHGV-1509928_39	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-1509928_47	K22300	56.3	7.8e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1509928_47	phrog_2328	42.0	0.000000000009	transcriptional repressor	transcription regulation
UniRef90	UHGV-1509928_47	UniRef90_A0A840UIJ2	87.8	5.99e-19	Transcriptional regulator with XRE-family HTH domain	N/A
Pfam	UHGV-1509928_47	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1509928_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-1509928_48	UniRef90_A0A414NZU9	205.0	0	Zinc-ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-1509928_48	1410618.JNKI01000008_gene522	70.5	0.0000000000138	N/A	N/A
Pfam	UHGV-1509928_48	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-1509928_50	K06400	312.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1509928_50	phrog_95	308.1	0	integrase	integration and excision
UniRef90	UHGV-1509928_50	UniRef90_UPI0004849866	476.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1509928_50	1200557.JHWV01000001_gene302	476.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1509928_50	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1509928_50	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1509928_50	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1509928_50	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1509928	Yes	36,301	57	94	1
UHGV-1377653	No	22,130	57	58	1
UHGV-1489826	No	19,693	57	51	1