vOTU vOTU-064071

vOTU: vOTU-064071

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-064071
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00063 → vGENUS-00033 → vSUBGEN-47658 → vOTU-064071
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula_A
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0117638
Biosample ID	N/A
Genome length (bp)	37,019 bps
CheckV completeness	99.90% (High-quality)
CDS count	54
CDS density	94.97%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula_A	Total connections	99	Host agreement	73.74
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella → Veillonella parvula_A	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0117638_1	K18830	42.9	0.00000000001	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0117638_1	phrog_8	62.6	1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0117638_1	UniRef90_UPI000E7282BC	116.0	3.26e-31	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0117638_1	1304866.K413DRAFT_0834	75.1	7.23e-16	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-0117638_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0117638_1	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0117638_1	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0117638_2	K07727	42.4	0.000000000018	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0117638_2	phrog_8	60.5	4.4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0117638_2	UniRef90_UPI0011DD19D6	79.7	1.7e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0117638_2	1304866.K413DRAFT_0834	79.7	9.86e-19	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-0117638_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0117638_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0117638_2	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_3	phrog_7735	73.8	2.3e-21	excisionase	integration and excision
UniRef90	UHGV-0117638_3	UniRef90_A0A2S7ZGX8	104.0	2.71e-27	HTH_17 domain-containing protein	N/A
Pfam	UHGV-0117638_3	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0117638_3	PF12728,NF033787,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117638_5	NF008912	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_6	phrog_674	66.9	1.1e-20	N/A	unknown function
UniRef90	UHGV-0117638_6	UniRef90_UPI000E71DE97	482.0	0	N/A	N/A
eggNOG-mapper	UHGV-0117638_6	318464.IO99_00465	78.2	0.000000000000108	N/A	N/A
Pfam	UHGV-0117638_6	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0117638_6	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_7	phrog_2324	164.7	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117638_7	UniRef90_UPI001402D75D	327.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0117638_7	1209989.TepiRe1_1126	147.0	8.26065e-42	ERF superfamily	N/A
Pfam	UHGV-0117638_7	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0117638_7	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_8	phrog_72	69.0	7.1e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0117638_8	445972.ANACOL_01825	96.7	1.02e-22	N/A	N/A
Pfam	UHGV-0117638_8	PF05772	N/A	N/A	NinB protein	NinB
KOfam	UHGV-0117638_9	K07451	42.0	0.000000000017	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0117638_9	phrog_7370	46.3	0.00000000000069	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117638_9	UniRef90_UPI001D06BA3D	98.2	7.99e-25	HNH endonuclease	N/A
Pfam	UHGV-0117638_9	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0117638_9	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0117638_9	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_11	phrog_5968	198.6	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117638_11	UniRef90_UPI0019608C6C	405.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0117638_11	1104325.M7W_2067	202.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0117638_11	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0117638_11	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-0117638_11	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_12	phrog_9804	77.0	2.6e-22	N/A	unknown function
structural_annotation	UHGV-0117638_12	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0117638_13	K03111	148.6	6.5861e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0117638_13	phrog_44	129.7	2.4e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117638_13	UniRef90_UPI0019613F2D	246.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0117638_13	879309.HMPREF9199_0149	194.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0117638_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0117638_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0117638_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0117638_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0117638_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117638_14	PF11305,MF_01360	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_15	phrog_1672	48.7	0.00000000000013	N/A	unknown function
COG	UHGV-0117638_15	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
PHROG	UHGV-0117638_16	phrog_954	230.6	0	DNA methyltransferase	other
UniRef90	UHGV-0117638_16	UniRef90_A0A239ZA70	298.0	0	Methyltransferase domain	N/A
eggNOG-mapper	UHGV-0117638_16	1401067.HMPREF0872_03435	267.0	0	methyltransferase	N/A
PADLOC	UHGV-0117638_16	MTase_II_00074	226.4	0	Type II methyltransferase	RM
Pfam	UHGV-0117638_16	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0117638_16	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0117638_16	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_17	phrog_2882	207.2	0	DNA methyltransferase	other
UniRef90	UHGV-0117638_17	UniRef90_UPI000E75FDEB	280.0	0	DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0117638_17	565653.EGBG_01954	193.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0117638_17	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0117638_18	K00571	116.3	3.9e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0117638_18	phrog_67	96.1	2.6e-29	DNA methyltransferase	other
UniRef90	UHGV-0117638_18	UniRef90_UPI00196047F8	518.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0117638_18	749222.Nitsa_1817	389.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0117638_18	MTase_II_00157	97.4	3.4e-29	Type II methyltransferase	RM
Pfam	UHGV-0117638_18	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0117638_18	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0117638_18	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_19	phrog_918	100.5	8.4e-30	N/A	unknown function
UniRef90	UHGV-0117638_19	UniRef90_UPI001960DED1	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-0117638_19	1401067.HMPREF0872_03440	103.0	3.76e-28	N/A	N/A
Pfam	UHGV-0117638_19	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0117638_19	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_21	phrog_21026	74.2	1.8e-21	N/A	unknown function
KOfam	UHGV-0117638_22	K01160	41.2	0.000000000041	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
UniRef90	UHGV-0117638_22	UniRef90_UPI000E767467	263.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0117638_22	1273103.NM10_01114	105.0	3.82e-27	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0117638_22	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0117638_22	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0117638_23	K01520	138.8	4.30002e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0117638_23	phrog_135	141.7	3.20057e-42	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117638_23	UniRef90_UPI000E75FAC9	278.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0117638_23	66692.ABC2847	125.0	2.07e-34	deoxyuridine 5'-triphosphate nucleotidohydrolase	N/A
Pfam	UHGV-0117638_23	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0117638_23	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0117638_23	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0117638_23	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_24	phrog_419	96.0	4.5e-28	N/A	unknown function
UniRef90	UHGV-0117638_24	UniRef90_A0A139N8I3	79.7	1.08e-16	N/A	N/A
eggNOG-mapper	UHGV-0117638_24	1123263.AUKY01000015_gene1587	93.6	5.64e-23	N/A	N/A
PHROG	UHGV-0117638_25	phrog_36	48.1	0.00000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0117638_25	UniRef90_A0A6N2ZMD2	63.2	0.00000000143	Sigma-70, region 4	N/A
eggNOG-mapper	UHGV-0117638_25	706434.HMPREF9429_00383	64.7	0.0000000000626	N/A	N/A
structural_annotation	UHGV-0117638_25	PF07374,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117638_28	UniRef90_A0A847PRP4	55.5	0.0000000073	Helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0117638_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0117638_28	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0117638_28	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0117638_30	K07474	121.2	1.7e-35	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0117638_30	phrog_51	128.0	4.9e-38	terminase small subunit	head and packaging
UniRef90	UHGV-0117638_30	UniRef90_UPI001D073EE5	257.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0117638_30	1280689.AUJC01000003_gene961	122.0	3.74e-34	Terminase small subunit	N/A
Pfam	UHGV-0117638_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0117638_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0117638_30	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0117638_31	K06909	119.9	3e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0117638_31	phrog_979	158.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0117638_31	UniRef90_UPI001D07F325	928.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0117638_31	1121091.AUMP01000003_gene2581	374.0	0	Terminase-like family	N/A
Pfam	UHGV-0117638_31	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0117638_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0117638_31	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_33	phrog_156	342.9	0	portal protein	head and packaging
UniRef90	UHGV-0117638_33	UniRef90_F7NK66	377.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-0117638_33	401526.TcarDRAFT_1284	396.0	0	Tfp pilus assembly protein FimV	N/A
COG	UHGV-0117638_33	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0117638_33	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_35	phrog_334	201.3	0	major head protein	head and packaging
UniRef90	UHGV-0117638_35	UniRef90_UPI000E723A53	635.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0117638_35	401526.TcarDRAFT_1286	248.0	0	N/A	N/A
Pfam	UHGV-0117638_35	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0117638_35	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0117638_35	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117638_36	PF20387	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117638_37	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0117638_38	1485543.JMME01000005_gene872	360.0	0	N/A	N/A
structural_annotation	UHGV-0117638_38	PF11134,MF_00923,NF000022,COG4257	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117638_39	PF20747	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117638_41	PF11039,MF_00084,NF000482,COG3818	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117638_42	UniRef90_UPI001D07B8A4	652.0	0	Hint domain-containing protein	N/A
eggNOG-mapper	UHGV-0117638_42	1123288.SOV_4c02760	110.0	2.43e-23	N/A	N/A
Pfam	UHGV-0117638_42	PF13403	N/A	N/A	Hint domain	Hint_2
structural_annotation	UHGV-0117638_42	PF07591,NF038136,TIGR03017,COG4942	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_44	phrog_9854	515.6	0	N/A	unknown function
UniRef90	UHGV-0117638_44	UniRef90_UPI000E7651BD	2827.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0117638_44	401526.TcarDRAFT_1293	879.0	0	protein secretion by the type IV secretion system	N/A
Pfam	UHGV-0117638_44	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0117638_44	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0117638_44	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0117638_44	PF18857,PF18013	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_45	phrog_199	40.2	0.000000000029	holin	lysis
UniRef90	UHGV-0117638_45	UniRef90_UPI000E74DE8A	334.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0117638_45	883156.HMPREF9282_00970	247.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0117638_45	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-0117638_45	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0117638_46	K07273	155.5	0	acm; lysozyme	N/A
PHROG	UHGV-0117638_46	phrog_6745	123.4	2e-36	endolysin	lysis
UniRef90	UHGV-0117638_46	UniRef90_UPI001D0872FD	400.0	0	glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0117638_46	910314.HMPREF9220_0603	268.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0117638_46	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0117638_46	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0117638_46	PF01183,NF008377,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0117638_47	phrog_10797	193.6	0	N/A	unknown function
UniRef90	UHGV-0117638_47	UniRef90_UPI0018C518C1	119.0	3.49e-30	glycoprotease	N/A
eggNOG-mapper	UHGV-0117638_47	883156.HMPREF9282_01266	150.0	9.94922e-44	N/A	N/A
structural_annotation	UHGV-0117638_47	PF06531	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117638_49	UniRef90_W1XAK8	96.3	8.2e-25	Type II secretory pathway pseudopilin PulG-like protein (Fragment)	N/A
eggNOG-mapper	UHGV-0117638_49	479436.Vpar_1082	115.0	1.87e-32	General secretion pathway protein	N/A
COG	UHGV-0117638_49	COG2165	N/A	N/A	Type II secretory pathway, pseudopilin PulG	N/A
KOfam	UHGV-0117638_50	K02654	67.9	2e-19	pilD, pppA; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]	N/A
UniRef90	UHGV-0117638_50	UniRef90_A0A811GGS9	358.0	0	Peptidase_A24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0117638_50	479436.Vpar_1081	343.0	0	aspartic-type endopeptidase activity	N/A
Pfam	UHGV-0117638_50	PF01478	N/A	N/A	Type IV leader peptidase family	Peptidase_A24
COG	UHGV-0117638_50	COG1989	N/A	N/A	Prepilin signal peptidase PulO (type II secretory pathway) or related peptidase	N/A
COG	UHGV-0117638_51	COG2165	N/A	N/A	Type II secretory pathway, pseudopilin PulG	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0117638	Yes	37,019	38	100	1